mRNA_Ecto-sp13_S_contig6780.17705.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6780.17705.1
Unique NamemRNA_Ecto-sp13_S_contig6780.17705.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6780.17705.1 vs. uniprot
Match: A0A6H5KNL2_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL2_9PHAE)

HSP 1 Score: 783 bits (2022), Expect = 9.750e-275
Identity = 567/641 (88.46%), Postives = 590/641 (92.04%), Query Frame = 1 
Query:    1 MKQRPQLGVSGCQAVTAIRDRKQRGRRGALHGSRATQQPAREGGRTAVTPXXXXXXXXXVLSPELCSGFTSGLSAVATRSCWAPSRRGVSVPSSQQHGREWHRCTGRGVDRSRSESGRSRRLQALAAETDSPNTNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-QPPRGVSPSSGGRSVGVATAPRTQSAAPFSIESIASTLESGQSQTSTARGNXXXXXDQQQQQVWRDNSFDQRGRGDAAAVGLRSRNTEERGGKGADQEPGYDDGRNGFPGSRAGAASSARDPGVVGGGDTVGEEKSKGNPNKLSLRKRRAREXXRETPEEKQLQNEVALALKADSAEETLRSFNTAMEVGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSIAGELWDYARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPVAATPSIPINGDAGALGNTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDAERARIRETLFGLAGLQVKKHARSRRARVPCENSE 1920
            M+QRPQLGVSGCQAVTAIR+RKQRGRRGALHGSRATQQ AREGGR+ VTPXXXXXXXXXVLSPELCSGFT+GLSAV TRSCWAPSRRGVS+PSSQQHGREWH CTGRGVDRSRSESGRSRRLQ +AAE+DSPN+N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QPP+GVSPSS GRSVG A APRTQSAAP SIESIAS LE GQSQTSTAR  XXXXX    QQVWRD+SFD+RGRGDAAA GLRSRNTEERG  GADQEPGY  GRNGFPG RAGAA++ RDPGVVGGGDTVGEEKSKGNPNKLSLRKRRAR XX ETPEEKQLQNE+ALALKADSAEE LRSFNTAME+GVALRANLLRGVLNQCAKAGL              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLS+AGELWD ARSGKLDEKLL+MSYHARNLTMGQVEQLEEHFNAVP+AA PSIPINGDAGA+G+TNA AITE   SSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTD ERARIRETLFGLAGLQVKKHARSRRAR+PC++SE
Sbjct:    1 MEQRPQLGVSGCQAVTAIRERKQRGRRGALHGSRATQQSAREGGRS-VTPXXXXXXXXXVLSPELCSGFTTGLSAVTTRSCWAPSRRGVSMPSSQQHGREWHGCTGRGVDRSRSESGRSRRLQTVAAESDSPNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVQPPQGVSPSSSGRSVGAAVAPRTQSAAPISIESIASLLERGQSQTSTARXXXXXXXXXXXQQVWRDDSFDKRGRGDAAAAGLRSRNTEERGAGGADQEPGYHGGRNGFPGGRAGAANAVRDPGVVGGGDTVGEEKSKGNPNKLSLRKRRARXXXXETPEEKQLQNEIALALKADSAEEALRSFNTAMEMGVALRANLLRGVLNQCAKAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLDMSYHARNLTMGQVEQLEEHFNAVPLAAAPSIPINGDAGAVGDTNACAITEI--SSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIPCDSSE 638
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BLAST of mRNA_Ecto-sp13_S_contig6780.17705.1 vs. uniprot
Match: D8LN58_ECTSI (Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN58_ECTSI)

HSP 1 Score: 694 bits (1792), Expect = 8.520e-234
Identity = 497/555 (89.55%), Postives = 516/555 (92.97%), Query Frame = 1 
Query:  271 VPSSQQHGREWHRCTGRGVDRSRSESGRSRRLQALAAETDSPNTNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PQPPRGVSPSSGGRSVGVATAPRTQSAAPFSIESIASTLESGQSQTSTARGNXXXXXDQQQQQVWRDNSFDQRGRGDAAAVGLRSRNTEERGGKGADQEPGYDDGRNGFPGSRAGAASSARDPGVVGGGDTVGEEKSKGNPNKLSLRKRRAREXXRETPEEKQLQNEVALALKADSAEETLRSFNTAMEVGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSIAGELWDYARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPVAATPSIPINGDAGALGNTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDAERARIRETLFGLAGLQVKKHARSRRARVPCENSER 1923
            +PSSQQHGREWHRCTG GVDRSRS+SGRSRRLQA+A E+DSPNT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PQPP+GVSPSSGGRSVG A APRTQSAAP SIESIASTLESGQSQTS+AR N     DQQQQQVWRD+SFDQRGRGDAAA GLRSRNTEE G  G DQEPGYDDGRNGFPG RAG A++ARDPGVV GGD VGEE+SKGNPNKLSLRKRRARE  RETPEEKQLQNEVALALKADSAEETLRSFNTAME+GVALRANLLRGVLNQCAKAGLMDDCMRVVMEMK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLS+AGELWD ARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVP+AATPSIPINGDAGA+G+TNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERP SCPACGGALRAVGLTD ERARIRETLFGLAGLQVKKHARSR  ++   + +R
Sbjct:    1 MPSSQQHGREWHRCTGCGVDRSRSDSGRSRRLQAVAEESDSPNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPPQGVSPSSGGRSVGAAVAPRTQSAAPISIESIASTLESGQSQTSSARSNGNNPSDQQQQQVWRDSSFDQRGRGDAAAAGLRSRNTEEPGWVGDDQEPGYDDGRNGFPGGRAGVANAARDPGVVEGGDIVGEEQSKGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPLAATPSIPINGDAGAVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPHSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRHTKMLARSRQR 555
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6780.17705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNL2_9PHAE9.750e-27588.46PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
D8LN58_ECTSI8.520e-23489.55Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6780contigEcto-sp13_S_contig6780:388..7667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score701.8
Seed ortholog evalue3e-199
Seed eggNOG ortholog2880.D8LN58
Model size2541
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
Ec32 ortholog descriptionPentatricopeptide repeat
Ec32 orthologEc-05_003590.1
Cds size2001
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6780.17705.1prot_Ecto-sp13_S_contig6780.17705.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6780 928..7667 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463931.8655202-UTR-Ecto-sp13_S_contig6780:387..9271681463931.8655202-UTR-Ecto-sp13_S_contig6780:387..927Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6780 388..927 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463931.8790076-CDS-Ecto-sp13_S_contig6780:927..12451681463931.8790076-CDS-Ecto-sp13_S_contig6780:927..1245Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 928..1245 -
1681463931.8899083-CDS-Ecto-sp13_S_contig6780:1615..17871681463931.8899083-CDS-Ecto-sp13_S_contig6780:1615..1787Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 1616..1787 -
1681463931.9006178-CDS-Ecto-sp13_S_contig6780:2282..24341681463931.9006178-CDS-Ecto-sp13_S_contig6780:2282..2434Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 2283..2434 -
1681463931.911184-CDS-Ecto-sp13_S_contig6780:2966..30271681463931.911184-CDS-Ecto-sp13_S_contig6780:2966..3027Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 2967..3027 -
1681463931.9216642-CDS-Ecto-sp13_S_contig6780:3433..35631681463931.9216642-CDS-Ecto-sp13_S_contig6780:3433..3563Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 3434..3563 -
1681463931.9318764-CDS-Ecto-sp13_S_contig6780:4343..45041681463931.9318764-CDS-Ecto-sp13_S_contig6780:4343..4504Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 4344..4504 -
1681463931.9433925-CDS-Ecto-sp13_S_contig6780:4844..49251681463931.9433925-CDS-Ecto-sp13_S_contig6780:4844..4925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 4845..4925 -
1681463931.9701724-CDS-Ecto-sp13_S_contig6780:5607..61481681463931.9701724-CDS-Ecto-sp13_S_contig6780:5607..6148Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 5608..6148 -
1681463931.9866655-CDS-Ecto-sp13_S_contig6780:7282..76671681463931.9866655-CDS-Ecto-sp13_S_contig6780:7282..7667Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6780 7283..7667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6780.17705.1

>prot_Ecto-sp13_S_contig6780.17705.1 ID=prot_Ecto-sp13_S_contig6780.17705.1|Name=mRNA_Ecto-sp13_S_contig6780.17705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=667bp
MKQRPQLGVSGCQAVTAIRDRKQRGRRGALHGSRATQQPAREGGRTAVTP
PPLLLLLLLVLSPELCSGFTSGLSAVATRSCWAPSRRGVSVPSSQQHGRE
WHRCTGRGVDRSRSESGRSRRLQALAAETDSPNTNRRRATQQQGQQRQPQ
QREPPMQQQQQQQRRQPQPPRGVSPSSGGRSVGVATAPRTQSAAPFSIES
IASTLESGQSQTSTARGNGNNPSDQQQQQVWRDNSFDQRGRGDAAAVGLR
SRNTEERGGKGADQEPGYDDGRNGFPGSRAGAASSARDPGVVGGGDTVGE
EKSKGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSF
NTAMEVGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKERGMVIEENTY
VPLIRGMVSHGNCHDAFDLIKDMVNQGVQPRLRCYEPVIAEMCREGGTDA
AREVWEHMEQQGVIPREEQYVNYLCGLSIAGELWDYARSGKLDEKLLEMS
YHARNLTMGQVEQLEEHFNAVPVAATPSIPINGDAGALGNTNAFAITEAV
KSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRA
VGLTDAERARIRETLFGLAGLQVKKHARSRRARVPCENSERRYETRGSRQ
KIALISQTDESHPRST*
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mRNA from alignment at Ecto-sp13_S_contig6780:388..7667-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6780.17705.1 ID=mRNA_Ecto-sp13_S_contig6780.17705.1|Name=mRNA_Ecto-sp13_S_contig6780.17705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7280bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6780:388..7667- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCAGAGGCCCCAGCTGGGTGTCTCTGGCTGCCAAGCCGTGACGGC
CATTCGCGACCGGAAGCAGCGAGGAAGGCGCGGAGCTCTCCATGGCAGCA
GAGCAACACAGCAGCCCGCGAGAGAAGGCGGAAGGACAGCAGTGACGCCG
CCGCCGCTGCTGCTGCTGCTGCTCCTGGTGCTGTCGCCCGAGCTTTGTTC
TGGCTTCACCTCCGGCTTGAGTGCTGTTGCAACACGTTCGTGTTGGGCCC
CAAGTCGACGTGGCGTTTCGGTGCCATCTTCACAGCAGCACGGGCGCGAG
TGGCACCGGTGTACTGGCCGCGGAGTCGACAGATCACGTTCGGAGTCGGG
GCGAAGCCGAAGACTGCAGGCCCTCGCCGCAGAAAGTGGTGGGTTGCCCC
TGCACAGCCGCTCATATTGTGTTTGCCGCTGAGTCGAAGCTGGTGTTGCG
TGTGTATCTACTGCAGCAGCTACAGTACACCGAAACAATGGTTGGTTCAA
AATTCGGTGCATTGCCGCACAAAATCGTACTCGGCCGTGGTAGGGAATAG
AGCAACTCTGCCTTGGAGCTCAGGGAACAGCTCATAGACTCATCTCATAT
CTCATACCTCAACTGCACAGGAGTATCGACAGACCCCAGGCTCATGTTCA
CCCCCGCCATGCTTTTCAAGGATGCATGAGCAGCGTTGTTTACGCGTTAT
GGCCAAGTACGGTGACCCGTGTTGGCGCCGAACCGGTATTACGAGGAGGT
ACTTATCCGTAGACTCGCTGCGGTTTGGTGGCTCGTCTGGCGCATGTCGC
ATGCTGTCGGTTATTGGGTGCGAGAGGCGGCAGTCAACGACGGACCAGCA
TCACCAACAAACCAACAGCGGTAGCACTGTTGTCCATGATCTACATAGGC
CTGATCTGGTTCAGACACGATCTTGGTGATCGTCGAACCAACAACAGACT
GGGCTTTTTGTGCCAACCGACTGCCTACTTTCGTAAACCAACAGGGGTGA
GGCGTGAGCCAATGGGACAGGAGTGCAGTCACGGGCCCTCCTATGGGGCG
GGTGGCCGGCATACAATTGGTGGAATATTTTGTCATAGATGGAACCCTTC
AAGCTGTTCTTCACCCCGGACGGCGCGGGTGCCCGCTACAGGCCGTGCGA
ATCAGACTTGGCACGTAGCCGCGCTATTGAAGGCCCACGACTTTTTTGTG
ATGCCGGCAGAGTCTTCCAGGCTGCTGTGATCCTTTTAAAATGCCTAGCC
GAAGCGCATTCTTGCCTTGAGAGTGCCGCATGAGCCTGCTGTTAAAGTCG
TCATGGCACAGCAGTGTAATTCGAGTGTGCCCTAACCGTATACGCGGTGC
ATGCGCGGCGAGTTGGTTGACACGAGTCCCTCGACTCGCCTCTCGAAGCT
CGGCCGGAAAGCCCTCTCAGCTGTGCGCCGCACGGGTGTGCCCTGTTTCC
GTTTCCTCTTTTCGAACGTTTTCGAGTTTAGCTCTTCAACCACTCACTCC
CATCGCCTGACAATCTGAGCAGATAGTCCCAACACCAATCGTCGGCGAGC
AACACAACAGCAGGGGCAACAGCGGCAGCCACAACAGCGAGAGCCCCCAA
TGCAACAGCAGCAACAACAGCAAAGAAGGCAACCGCAGCCGCCTCGGGGC
GTATCCCCTTCTTCAGGTGGAAGAAGCGTGGGCGTGGCGACAGCACCGCG
AACGCAATCAGCGGCACCATTCTCCATAGAATCTATCGCGTCAACGCTAG
AGAGCGGCCAGAGCCAGACCTCCACTGCCAGAGGCAATGGTAACAATCCT
AGCGACCAACAGCAGCAACAGGTCTGGAGAGACAACAGCTTTGATCAACG
CGGCAGGGGTGATGCCGCGGCGGTAGGTCTTCGTTCGCGAAACACTGAGG
AGCGGGGGGGAAAAGGTGCTGATCAGGAACCAGGCTACGACGACGGCCGG
AATGGGTTCCCGGGTAGCAGAGCGGGGGCGGCAAGTTCAGCCCGTGACCC
GGGGGTTGTAGGAGGTGGGGACACCGTGGGTGAGGAGAAGTCCAAGGGCA
ATCCCAACAAGTGAGTGTAGCGGCATGAGAATTGTTGTCTCAGAGGTTAC
TGCCGATTGTTGTTGTTGTTGTCGTTGTTGTTCATTTTTTTGGAATTGCA
CGGACCTCTGAGCTCTCGATGCAGCAAAGCAGTAGCGTTGAGTTTTACAA
GCCTGGGAACAGTTCATTTTCTCGTTGACAGCCCCTGGTGAGATCGGAAC
GATCGTCGTCGCGACTCTCCCCCTGGGGCAGGACATGCCGCGCATCTCAA
TGCCGATGCTGTTGTAGTGTGTCATGGTGGTGGTTGTGGTGATGGTGGTG
CCACTGCTGGTCCTGCTGCGGCCCCTACTTGTTGGTCTGATGATTGATAT
ACTGGACGTCGACAGCCAGCTGCGAGTGTCCGCTCTGTTCTTCCGCAGAA
TAGAATACTCTCGCCTCGATCTTTGTTCTCGACGAGCCAGTGCTGCTGCG
GCCCTGAAACCGCCGAGATGATACGATGTCTCTATTGTGGCGTTCGATAG
CATGAGTATTCGAACAAATCGACACCCGTTTTTTGTACAGGGAAGCATGT
GGTACAACGAGCACGGTTGGTTTTGCGGGTGTGGTCTGATGCGGCCTTGC
ACCGCCGGCTAGCGTTACGACCGACCTGCTTCCGTACGTGAAGCGTTAAT
CGACAACTGTTGCTGTTGTTGCTGACCCGGCGGCTGTGCCAGATTGTCTC
TCAGAAAGCGGAGGGCGAGGGAAAGGAAGAGGGAGACGCCGGAAGAGAAG
CAATTGCAGAACGAGGTCGCTCTGTGAGTCGCTCGATCGTGTGACCGTCG
TCGCGTGTTGTTGTTCATGATGTTGGTGGTTGTTGTTGGTAGTCGTGAAA
AGTAGCAGGAGCGGTCCCGGTATAGAAGCGCACAATGCCGGGTAGAGGTT
CGGTTTCGGATTACAACGCCAACTGTATTTCACTCGGCGCTTGGACAATG
GTGTGCACGAAAATGGTTGGCTTGTGCACGGTATGTTATCGACACAGCAA
CGGCCGCTGTCGCCTCCACCCAGTGACTCCTTGAATTGCACTTGCTAGTC
CAACGATGCGCCGGTGGTCGTCGTTGTTGTTGTTGTTGTTGTGGCGGTGG
CGGTGATTGTCAGAGCGCTAAAGGCCGACTCCGCCGAGGAGACGCTCCGG
TCGTTCAACACGGCCATGGAGGTGGGAGTTGCGCTTAGGGCCAACCTGCT
CCGGGGTGTCCTGAACCAGTGCGCCAAGGCCGGCCTGATGGACGACTGCA
TGAGGGTCGTCATGGAGATGAAAGGTGCGGTACTCGCCGTGTGGACTTAG
CTGTTGCGTCTTGAAGTCGCTGCATCCCTGGTGTTCTCGCAGCCCTGTTG
GTATTGTGGTCTGTAGGACTCGGATCTACTGCACAATGCGTGGAGAGGCC
AGATCGTTTCGAGTGTCGAACAAGTTTGGCTGTGCTCTGAACGACGGTGT
ACGTCATCAATGGAGGTTTGGCTTTGTCGCCCGCGCGTGGCAAAGCCTTG
CCATACTCTTCGATTCTGCGGCATAAAGCTCGCTTGTGGCCTTTCCTATC
TTTCATGTTTTGGTTTCAAGTCGTGGGATTAAGCGTGTACTGTAGCGCGG
TAGTCTTTTCAGGGGCTGTTCATGCGCTTTGATGCAAAGTTGTAGCACTT
GCTGAGGCAGGGTGTGAGAGCGTGTTTTTGACGTTAACCACGGAATCTCC
TGTCTCGTCTACGCGGTCGTGTTGCCATCGAAGTTTCAATACAAATGATT
GTGCGTCGTGTCATCTGTGACAACATGTAGGTACACTCGACAATAACGTG
CGTCACGTAGAGGTGGTGACAAATTACTGAACAGGCGCGTTCCACATGCC
GTCCATCAGGTGCACTCTGTGCCCCGTGATGGGTTGATCCTTCGTTTTTT
CGTGCTGACTTCGGCGGTGTGGCTGAGGCATGCTTATGGCTGGTGCTCCT
ACCTTGCGCGCATGCACAAAGCGCCATTTCTGTCTTGTTTGTGCAGTCGT
TGTGCAATATTTGCGCGATCTCTGAAACTTTGTTTCCTTCGTGTGTGATG
GCAGAGCGGGGCATGGTGATCGAGGAGAACACTTACGTGCCGCTTATCCG
CGGCATGGTGAGCCATGGCAACTGTCACGACGCTTTTGATCTCATCAAAG
ACATGGTGAACCAGGGGGTGCAGCCCAGGCTGAGGTGCGGCGGCTCTAAG
AACGGCACAGCGCCCAATGTCTACGCTCAAATGCGTGCTTGTGTGTTCGG
TGCTTTATGTTGTTCAATCACGACCCGGGTTGGACGACAGGTGATGCGGC
CCTGGTCATAGTTTCAGCGGGATGGGGACACGGCTTGTCGTTGCCCGTAC
TTAGGTTCGGAGTAAGCTTTCTGTCCGTAGTAGCATGTCGGAAGTTGACG
TGACGACAGATTGTTGTGTCCTTTTTCGTATGCCAACTTCCATGGCGAGC
AGTGGTCGTGCAATGTTCTTTCTGCGTGTGCCGACCAACTTGAAACACGA
ACCCCCTCCAAGTGAAGTTGAAAATGTTTCAAGGTGACACGTCGTGGTGG
TACGTATCTGGTGTGTCTTTGTTACTCCGTGTTCCAACAGGTGTTACGAG
CCGGTCATCGCGGAGATGTGCCGCGAGGGGGGTACGGACGCTGCCAGAGA
GGTAATTCCGGCGGTGCTCCACCGAAGAATAGGCTCTCGTTTCGCACTCG
AAGTTCACTGACTTCGCAACACCGTCCACCAGCTCCGCACCACAGTTCCT
TGCTAACACGTGACCAGGGTTCAGAGCTGGCTGTTTCAGCACTCTCCCTC
TGAGTCTTGAGGCCCTTGCTACGCATGTAGAAGCACCACTCCCGCTTCGC
GCACACCTTCCATCAGGTCCGAAGACCTCAGAGATCTGTTGTAGTTGGGC
TGGAGTACGCGTTGAGAGGCCGTTGGGTCCACGGTCTCTTATCAGCGCTC
AGTAGATATTAGGAAGTGTTTCTTCAACACGCCGGCCGCTCCCCCCCCCC
CTCCCTCTCTCGTGTATCTATTTGTAGCATGTGTCGTCGCCTCGCATCGT
GTGCACGACCTGCGCATCTCCACGAATTCTCCGGCTTGCTGGGAAGCCTT
CCAGCCACACGCAACACGGTCAATCGGAGGGCGAGGATGGTGTGTTGTTT
TCACATTTTTGTGTTCGTTTTCATGAACCCCAGGTGTGGGAGCACATGGA
GCAGCAGGGCGTCATTCCACGCGAGGAGCAATACGTGAACTACCTCTGCG
GCCTAAGCATTGCCGGCGAGCTGTGGGACTACGCACGCTCCGGAAAGCTG
GACGAGAAGCTGCTGGAGATGTCCTACCACGCCAGGTGGGTGGCAGAGAG
TGCCAGCGGCGGTGTGGATTGTCCTGAGCCTGTTTATCAACACTTGGACG
GTTTGGTGGCATGATCTGCTATGTTCTTGTTGCGTGTTGAGCATGGACAC
CCCCTGTTTTCTTTCAGGGTGGCGAGAGCACTGCTGGGATACTTTTCGTG
TTGTTTCGGTGTTGGTTCGACATGACTTCTCCTTCCGCTTTGTCGTTTTC
ATCGCCGTTTTCTTTTTTCGGTCCTAGAGTTGCAGCTCGATTTAATCGTA
GGCAACAGATTCCAAGCGCTGCCCGAGGTAAGCACTAGCTTCCACAGCAG
TGTCACCCCGATTCCAACCCCATGTTGGGAACACAATCGTGCTTAGTGGC
GTTGGGCCAGCCTCTCGAGCCCGTTCTCAACCTGATTTCTCACGATTCCC
TCTCCGCGCGAGGTTCGATTTTTCCGCATTGCACGTTACCCCACATCTCA
CATCTTGGCGCGCGGCTTGATTTGGCGCAGGAACCTTACGATGGGCCAGG
TGGAACAGCTGGAAGAGCACTTCAACGCGGTCCCAGTAGCGGCGACGCCT
TCAATCCCCATCAACGGCGATGCCGGTGCGTTGGGGAACACGAATGCCTT
CGCTATCACGGAGGCGGTGAAATCGTCCGTTCCGCTAGCGCGGAGAGTCA
AGGTATGTCAGGCAATTGAATCGCTCGAAACATCTGAAATGTCATGTGGA
TTTATCCGTCCGCTCTCGGTTGTGTGGGGTCGGATACCGCGATGAGCTGC
CTGTGTGGATGGTGATGGGAAGTGGAGCTTGCGCGTGTATCAGCATGCGG
CCCGAGATATTGGTCTGCAAGGAAAATGGAAGACTCGAAGTGAGCGATAT
CGGCATTATCGACTATCATGACATGCGATAGAGCTGACGATGCTGTGGGA
AAGCAATAACAACAGCAGCGGCAGCGATGGCGGCGGTGGCAGCAGCAGCA
ATACAAAGTGCTGGAGCAAAAAATAACAAGATGAACTCTTGTCTCCGCCG
CAATGGTGCATGTATCGCCCAGGTCGCCGGCGGGCACGAGATCGATGACG
ACAGCTGGACGAGAGAGTGGTCCAGCAGGAAGCCGACACGTGCCGAACGG
CCGGACAGCTGCCCCGCCTGCGGCGGGGCCCTCCGGGCCGTCGGCCTGAC
CGATGCCGAGAGGGCGAGGATCCGGGAAACGCTGTTCGGTCTCGCAGGAC
TGCAGGTCAAGAAGCACGCGAGAAGCAGGCGAGCAAGAGTTCCGTGCGAA
AACAGTGAACGACGTTATGAAACTCGCGGATCTAGACAGAAGATTGCGTT
GATCTCGCAGACAGACGAATCTCACCCGCGAAGCACGTAGCCTAGTTCCA
ATCAGCAGCTTGACTCTCGGAGCACCGTGTTGGCACTCCAGGGTCCAACA
ATGCCGCCGTGGTTCTAAGCAATACATGGCGTCTGGGTTTGCATTGTACT
TCTTGTTATGGATGGACGCATCTGCTTTGGTGATGAGATGGTGAAGAACT
TGCACACGAAATGAACGTTAGGAATAGTCCCTTCGACATTCACGATGGAT
CCACTTCCGACGTTAGTGCACGGTGTGGATTGATACCCGTGTGATTTGCA
CTCCACGAAGGTTATTCGCTTGATGCCGGAACGGATACGTCCGCGGAGCA
ACACGGAACAGCGAAGTTTTCGTTTCACTTCGCCAAAGGTCCCAGTAGTT
GTTTACGCGAGTACAGCGGGGGGATGTGTTCAAGTTTTTTGAACGGCAGG
CCAGTAGCACGGAGAGACACAAGCCGCAGATGACCTCCTCGATCTTCTTT
CGCACACCTCGTTCATTTTCTACAAGTTGTTTCGTTTGGTGCGCGATCGG
CACGGTAGTGGGTGCAGCCATGACCCTTCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6780:388..7667-

>mRNA_Ecto-sp13_S_contig6780.17705.1 ID=mRNA_Ecto-sp13_S_contig6780.17705.1|Name=mRNA_Ecto-sp13_S_contig6780.17705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2001bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6780:388..7667- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCAGAGGCCCCAGCTGGGTGTCTCTGGCTGCCAAGCCGTGACGGC
CATTCGCGACCGGAAGCAGCGAGGAAGGCGCGGAGCTCTCCATGGCAGCA
GAGCAACACAGCAGCCCGCGAGAGAAGGCGGAAGGACAGCAGTGACGCCG
CCGCCGCTGCTGCTGCTGCTGCTCCTGGTGCTGTCGCCCGAGCTTTGTTC
TGGCTTCACCTCCGGCTTGAGTGCTGTTGCAACACGTTCGTGTTGGGCCC
CAAGTCGACGTGGCGTTTCGGTGCCATCTTCACAGCAGCACGGGCGCGAG
TGGCACCGGTGTACTGGCCGCGGAGTCGACAGATCACGTTCGGAGTCGGG
GCGAAGCCGAAGACTGCAGGCCCTCGCCGCAGAAACAGATAGTCCCAACA
CCAATCGTCGGCGAGCAACACAACAGCAGGGGCAACAGCGGCAGCCACAA
CAGCGAGAGCCCCCAATGCAACAGCAGCAACAACAGCAAAGAAGGCAACC
GCAGCCGCCTCGGGGCGTATCCCCTTCTTCAGGTGGAAGAAGCGTGGGCG
TGGCGACAGCACCGCGAACGCAATCAGCGGCACCATTCTCCATAGAATCT
ATCGCGTCAACGCTAGAGAGCGGCCAGAGCCAGACCTCCACTGCCAGAGG
CAATGGTAACAATCCTAGCGACCAACAGCAGCAACAGGTCTGGAGAGACA
ACAGCTTTGATCAACGCGGCAGGGGTGATGCCGCGGCGGTAGGTCTTCGT
TCGCGAAACACTGAGGAGCGGGGGGGAAAAGGTGCTGATCAGGAACCAGG
CTACGACGACGGCCGGAATGGGTTCCCGGGTAGCAGAGCGGGGGCGGCAA
GTTCAGCCCGTGACCCGGGGGTTGTAGGAGGTGGGGACACCGTGGGTGAG
GAGAAGTCCAAGGGCAATCCCAACAAATTGTCTCTCAGAAAGCGGAGGGC
GAGGGAAAGGAAGAGGGAGACGCCGGAAGAGAAGCAATTGCAGAACGAGG
TCGCTCTAGCGCTAAAGGCCGACTCCGCCGAGGAGACGCTCCGGTCGTTC
AACACGGCCATGGAGGTGGGAGTTGCGCTTAGGGCCAACCTGCTCCGGGG
TGTCCTGAACCAGTGCGCCAAGGCCGGCCTGATGGACGACTGCATGAGGG
TCGTCATGGAGATGAAAGAGCGGGGCATGGTGATCGAGGAGAACACTTAC
GTGCCGCTTATCCGCGGCATGGTGAGCCATGGCAACTGTCACGACGCTTT
TGATCTCATCAAAGACATGGTGAACCAGGGGGTGCAGCCCAGGCTGAGGT
GTTACGAGCCGGTCATCGCGGAGATGTGCCGCGAGGGGGGTACGGACGCT
GCCAGAGAGGTGTGGGAGCACATGGAGCAGCAGGGCGTCATTCCACGCGA
GGAGCAATACGTGAACTACCTCTGCGGCCTAAGCATTGCCGGCGAGCTGT
GGGACTACGCACGCTCCGGAAAGCTGGACGAGAAGCTGCTGGAGATGTCC
TACCACGCCAGGAACCTTACGATGGGCCAGGTGGAACAGCTGGAAGAGCA
CTTCAACGCGGTCCCAGTAGCGGCGACGCCTTCAATCCCCATCAACGGCG
ATGCCGGTGCGTTGGGGAACACGAATGCCTTCGCTATCACGGAGGCGGTG
AAATCGTCCGTTCCGCTAGCGCGGAGAGTCAAGGTCGCCGGCGGGCACGA
GATCGATGACGACAGCTGGACGAGAGAGTGGTCCAGCAGGAAGCCGACAC
GTGCCGAACGGCCGGACAGCTGCCCCGCCTGCGGCGGGGCCCTCCGGGCC
GTCGGCCTGACCGATGCCGAGAGGGCGAGGATCCGGGAAACGCTGTTCGG
TCTCGCAGGACTGCAGGTCAAGAAGCACGCGAGAAGCAGGCGAGCAAGAG
TTCCGTGCGAAAACAGTGAACGACGTTATGAAACTCGCGGATCTAGACAG
AAGATTGCGTTGATCTCGCAGACAGACGAATCTCACCCGCGAAGCACGTA
G
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