mRNA_Ecto-sp13_S_contig6755.17673.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: D8LAU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU0_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 2.010e-160 Identity = 219/296 (73.99%), Postives = 237/296 (80.07%), Query Frame = 1
Query: 112 EQLQTEEKQETSGGIP---HAIVPGIAAPQLKGGGEGEGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELSCIDNFLPDEVLPCKENDRSSIYELDRDGHAYGSIYDLRKAKILDFNAVETWVPFYEKIAYEDMLVGERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYYTNSEHCAPNCT 990
EQ EE TS G+P HA AAPQ+KG EGEG HHI+YIS++AERHSGS W TGFL YFR DV VTPTLCTWKHWFQDRIHQD++DGKRPCR +Q+CPACLDTEHTLVV MWRNPYDWISGMH NPHHAKAHRGVQDL +FMTMPWIM PE L CIDNFLP+EVLPCKENDRSSIYELDRDG AYG+IY+LRKAKILDFNAVETWVPFYEK+ YEDMLVG LRDWLRSLETKYGLVGNY+ VPD+ L+ +MA MYYTNSEHCAPNCT
Sbjct: 7 EQQPAEEAPNTSIGVPSFEHA-----AAPQIKG--EGEGAHHIRYISVVAERHSGSRWFTGFLREYFRDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWISGMHSNPHHAKAHRGVQDLEQFMTMPWIMGPE----------------LPCIDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVPDNVLQTNMARLWRNMYYTNSEHCAPNCT 279
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: D8LAT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT9_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 5.470e-154 Identity = 205/270 (75.93%), Postives = 224/270 (82.96%), Query Frame = 1
Query: 181 AAPQLKGGGEGEGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELSCIDNFLPDEVLPCKENDRSSIYELDRDGHAYGSIYDLRKAKILDFNAVETWVPFYEKIAYEDMLVGERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYYTNSEHCAPNCT 990
AAPQ+KG EG+ HHI+YIS+++ERHSG TWMT FL YFR DV VTPTLCTWKHWFQDRIHQD++DGKRPCR +Q+CPACLDTEHTLVV MWRNPYDWI GMH NPHHAKAHRGVQDL +FMTMPWIM PE L CIDNFLP+EVLPCKEN RSSIYELDRDG AYG+IY+LRKAKILDFNAVETWVPFYEK+ YEDMLVG LRDWLRSLETKYGLVGNY+ VPD+ L+ +MA S MYYTNSEHCAPNCT
Sbjct: 31 AAPQIKG--EGDRAHHIRYISVVSERHSGFTWMTSFLWEYFRDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWIGGMHSNPHHAKAHRGVQDLEQFMTMPWIMGPE----------------LPCIDNFLPNEVLPCKENGRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVPDNVLQTNMARLWSNMYYTNSEHCAPNCT 282
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: D7FTA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA1_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 1.080e-142 Identity = 201/262 (76.72%), Postives = 210/262 (80.15%), Query Frame = 1
Query: 181 AAPQLKGGGEGEGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELSCIDNFLPDEVLPCKENDRSSIYELDRDGHAYGSIYDLRKAKILDFNAVETWVPFYEKIAYEDMLVGERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYYTNS 966
AAPQ++GGGEGEGPHHIKYISLIAERHSGSTWMTGFL+RYFRHSDVKVTPTLCTWKHWFQDRIHQDI+DGKRPCR+HQ+CPACLDTEHTLVVAMWRNPYDWISGM NPHHAKAHRGVQDLSE+MTMPWIMQP+NEERARKDALIKAKEE AKILDFNAVETWVPFYEKIA EDML GE L DWLRSLETKYGLVGNY+ V DSAL ESMA SRS MYYTNS
Sbjct: 10 AAPQIEGGGEGEGPHHIKYISLIAERHSGSTWMTGFLSRYFRHSDVKVTPTLCTWKHWFQDRIHQDIQDGKRPCREHQQCPACLDTEHTLVVAMWRNPYDWISGMQSNPHHAKAHRGVQDLSEYMTMPWIMQPKNEERARKDALIKAKEE-----------------------------------------AKILDFNAVETWVPFYEKIADEDMLDGETLGDWLRSLETKYGLVGNYIDVLDSALGESMAHSRSHMYYTNS 230
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: A0A6H5LNE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE9_9PHAE) HSP 1 Score: 382 bits (980), Expect = 8.750e-129 Identity = 175/259 (67.57%), Postives = 204/259 (78.76%), Query Frame = 1
Query: 211 GEGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELSCIDNFLPDEVLPCKENDRSSIYELDRDGHAYGSIYDLRKAKILDFNAVETWVPFYEKIAYEDMLVGERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYYTNSEHCAPNC 987
G GP IKYISLI ERHSG+TWM FL YFR D+ VT TLCTWKHWFQDRI+QDI+DGKR CR+ Q+CPAC D HTLVVAMWRNPYDW+SGMH P HA+AH + D+S+FMTMPWIM E E++ARK+ALI+ K+EL CIDNFLP EVLPC+ D S+IYELD G AYG+IY+LRKAKI DF+AV+ W P+YEKI YEDML + L+ WL SL+T YGL GNY VPDSAL M SR +MYY NS+HCAP+C
Sbjct: 94 GVGPLKIKYISLIGERHSGTTWMVKFLQDYFRDKDITVTATLCTWKHWFQDRIYQDIQDGKRLCREGQQCPACKDINHTLVVAMWRNPYDWVSGMHKIPWHAQAHASIPDMSKFMTMPWIMGAEEEKQARKEALIRTKDELPCIDNFLPWEVLPCRPGDESAIYELDPGGEAYGNIYELRKAKIRDFDAVKMWAPYYEKILYEDMLAKDGLKMWLMSLDTLYGLGGNYKSVPDSALAVKMESSRKQMYYMNSQHCAPHC 352
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: D8LB15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB15_ECTSI) HSP 1 Score: 208 bits (529), Expect = 2.410e-63 Identity = 93/133 (69.92%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 211 GEGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPE--NEERARK 603
G GP IKYISLI ERHSG+TWM FL YFR D+ VT TLCTWKHWFQDRI+QDI DGKRPCR+ Q+CPAC D HTLVVAMWRNPYDWISGMH P HA+AH + D+S+FMTMPWIM E + RAR+
Sbjct: 4 GVGPLEIKYISLIGERHSGTTWMVKFLQDYFRDKDITVTATLCTWKHWFQDRIYQDIHDGKRPCREGQQCPACKDINHTLVVAMWRNPYDWISGMHKIPWHAQAHASIPDMSKFMTMPWIMGAEVRDHRRARR 136
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: A0A7S3UU09_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU09_HETAK) HSP 1 Score: 130 bits (327), Expect = 2.180e-31 Identity = 93/287 (32.40%), Postives = 144/287 (50.17%), Query Frame = 1
Query: 148 GGIPHAIVPGIAAPQLKGGGEGEGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAH-----RGVQDLSEFMTMPW-IMQPENEERARKDALIKAKEELSCIDNFLPDEV-LPCKENDRSSIYELDR-DGHAYG--SIY----DLRKAKILDFNAVETWVPFYEKIAYEDMLVG--ERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYYT 960
G + + I K + GP I+ I+LIAERHSGSTW+ L F V+V ++C +KHWFQDR ++ GKR C + C CL+ E T++ +WRNPYDWI ++ P H+ +H +G D F+ W + P + +K K + C+DNF +++ C + S+IYE D H G S Y ++R AKI DF +V W P + + YE +L G + LRD+ ++ ++ L + P+ E + SR+++ T
Sbjct: 39 GNSTYELAKDIRRTTKKANNKDGGP--IRRIALIAERHSGSTWLFKVLQEAF--PGVQVQQSVCMYKHWFQDRHREETISGKRGCSKGY-CFPCLNPESTIIFNLWRNPYDWIVALNEIPWHSISHGYYSKKGHIDFIAFVNKEWKVHGPARQYMLKKQG--KKALQAPCLDNFQKNDLDFVCSK--ASAIYETTAGDPHYNGTQSYYAGPLEMRAAKIRDFMSVGKWAPNFYTVTYEALLFGGYDGLRDYFDAVAQRHNLTHH----PEKYRELVLPTSRNKLLST 312
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: A0A7S2K8J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J0_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.360e-26 Identity = 78/220 (35.45%), Postives = 103/220 (46.82%), Query Frame = 1
Query: 238 ISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELSCIDNFLPDEVLPCKENDRSSI-------------------YELDRDGHA--YGSIYDLRKAKILDFNAVE--TWVPFYEKIAYEDML 828
ISLI ERHSG+TWMT L + F D+K P L WKHWFQD+ D ++ K T+V+A +RN YDW M PHH+ H + EF+T PW M R +D IK K+ + C +NF DE++ C R S YEL DG Y +I ++R KI +F AV WV + I YE ++
Sbjct: 127 ISLIGERHSGTTWMTNELQKCFPTLDIK--PKLVRWKHWFQDKRIVDAKNQKP----------------TMVIAQFRNIYDWTEAMRQGPHHSPYHLRL-GWEEFVTKPWTMP-----RPARDLDIKDKKTIRCQENFGYDEIVSCVRGRRVSFPNQKVREQSLTNYSGHNPQYELRNDGSGLPYSNIIEMRSDKIRNFLAVSKWNWVKHFLAIKYETLV 322
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: A0A7S0G6T5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6T5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.080e-22 Identity = 70/259 (27.03%), Postives = 119/259 (45.95%), Query Frame = 1
Query: 229 IKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELSCIDNFLPDEVLPCKE------------NDRSSIYELDRDGHA--YGSIYDLRKAKILDFNAVETW--VPFYEKIAYEDMLVGERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYY 957
+ ISL+ ER++G+ W+T L++ F +K + L WKHWFQD D + +R + TLV+AM+RNPY+W+ M PHH+ +H ++ F+T PW M R D + C + F +V+ C+ + IYE+ DG + +I ++R AKI + V+ W + + YED+L + +++++LE G+ + P + LS+ + Y
Sbjct: 56 VMEISLLGERNTGTNWVTALLSKCF--PGIKTSARLVRWKHWFQD---DDSNENER--------------QKTLVIAMFRNPYEWVMAMRKTPHHSPSHLRLK-WQNFVTKPWTMT-----RPESDLVFSNSTGQICHEKFAYKDVISCQRQPPELMSSTGGYSSGKPIYEMRHDGSGKPFANILEMRAAKIHNHLGVQEWPWISGVHVVRYEDLLE-DGTGNFIKNLEKLTGVTASCKAEPPQPKRKKRKLSKEFVKY 288
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: K0RDY6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RDY6_THAOC) HSP 1 Score: 104 bits (260), Expect = 3.350e-22 Identity = 85/277 (30.69%), Postives = 123/277 (44.40%), Query Frame = 1
Query: 241 SLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQDRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLS------------EFMTMPWIMQPENEERARKDALIKAKEE------LSCIDNFLPDEVLPC-------KENDRSSIYELDRDG--HAYGSIYDLRKAKILDF------NAVETWVPFYEKIAYEDMLVGERLRDWLRSLETKYGLVGNYVGVPDSALEESMALSRSRMYYTNSEH 972
+LI ERHSG+ W+ L F + V +KHWFQ +R+G+ +V+AM+R+PYDW+ M PHHA H DL +F++ PWI P A KD +++AK E C+ + DEV+PC KE S +YEL DG AYGSI DLR+ K+L+F N V + P YE +++ + D+L+SLE GL + + + + M + N H
Sbjct: 24 NLIGERHSGTNWINDHLQDCFG-DQIAVESEFTRFKHWFQF-DDSSVRNGE-----------------AVVIAMFRDPYDWVEAMRERPHHAHDHADCTDLECPDCECRSMDWKDFVSKPWIG-PRGP--ADKDLMVRAKAEGRKLEVEGCLAGYRFDEVIPCLPEDSVDKEGYSSYMYELMHDGSNRAYGSIIDLRREKLLNFLTVPRMNGVRAFFPQ----RYEGLVL-KGTGDFLKSLEEVTGLTAKCTPFEGTGVVKHKNVEPEFMEWMNEYH 273
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Match: B8BQL9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQL9_THAPS) HSP 1 Score: 107 bits (266), Expect = 6.960e-22 Identity = 68/199 (34.17%), Postives = 100/199 (50.25%), Query Frame = 1
Query: 214 EGPHHIKYISLIAERHSGSTWMTGFLNRYFRHSDVKVTPTLCTWKHWFQ-DRIHQDIRDGKRPCRQHQKCPACLDTEHTLVVAMWRNPYDWISGMHFNPHHAKAHRGVQDLSEFMTMPWIMQPENEERARKDALIKAKEELS---CIDNFLPDEVLPCKENDRSSI-------YELDRDG--HAYGSIYDLRKAKILDF 771
EGP + I+LI ERHSG+ W+T L F ++V +KHWFQ D H + + +V+AM+R+PYDW+ M PHHA H G++ +F+T PW+ +R R + + ++ + C+ + DEV+PC D +I YEL DG AYGSI DLR+ KI++F
Sbjct: 118 EGP--VTSINLIGERHSGTNWITDHLEDCFG-DQIQVQTNFTRFKHWFQFDDPH-------------------VRNDSAVVIAMFRDPYDWVEAMRERPHHAHDHIGME-WKDFVTKPWVGPRGPADRVRMEQSKRDRQPIEYAGCLAGYKFDEVIPCSTEDSVNIDGYSGYMYELMHDGSHRAYGSIVDLRREKIVNF 293 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6755.17673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6755.17673.1 >prot_Ecto-sp13_S_contig6755.17673.1 ID=prot_Ecto-sp13_S_contig6755.17673.1|Name=mRNA_Ecto-sp13_S_contig6755.17673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp MVNKFRRVAAVLLVLLARASPRDAKVAFAAAARNLSTEQLQTEEKQETSGback to top mRNA from alignment at Ecto-sp13_S_contig6755:3241..8007+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6755.17673.1 ID=mRNA_Ecto-sp13_S_contig6755.17673.1|Name=mRNA_Ecto-sp13_S_contig6755.17673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4767bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6755:3241..8007+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6755:3241..8007+ >mRNA_Ecto-sp13_S_contig6755.17673.1 ID=mRNA_Ecto-sp13_S_contig6755.17673.1|Name=mRNA_Ecto-sp13_S_contig6755.17673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6755:3241..8007+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |