mRNA_Ecto-sp13_S_contig673.17636.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: A0A6H5JIQ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIQ1_9PHAE) HSP 1 Score: 1100 bits (2845), Expect = 0.000e+0 Identity = 654/702 (93.16%), Postives = 665/702 (94.73%), Query Frame = 2
Query: 194 PVLRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVSGDNNGGLLAPYQDGVNGSKVVGLNEHLRGESTTLNKDEVECVDVFMQNINSFLPLTTIDTVKRAAKATAPAVGGGXXXXXXXXXXXTETEERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAAREEIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNDIISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAGVPSSSNPAACQERVLNILSYVLLAIHNRSSRSNLAGNPAMSTGDWDPKAMTEHIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIVITEPLADLVADNPLVLHLPIVWSLVGCVRVLLDGADRTIAVERLQSAMAPLANHLGFSTDESLVEQELMSVFNGKQGLIKRKGATTAPSXXXXXXXXXXXXXQDLAATTGDILVRSSRAQTSSLNVTAQDYSHRGRSAINMLALEPSPAPRRRGLPASATRQGVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SRAGALTRLPAARGGSLSIPAPFVPKQSMLQLDMPFMGSSFLNNNPPAAAQPGTDGVSVMIKRDLGLPQQGGKAAXXXXXGEPRERDETLLDKLDASRAQMMREQREQQQSFSADAPVPSLDEATGEGDGVGLEDEDGR 2296
PVLRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGV DNNGGLLAPY DGVNGSK+VGLNEHLRGE TTLNKDEVECVDVFMQNINSFLPLTTIDTV RAAKATAP XXXXXXXXXXX EERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAAR++IKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSN+IISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAG+PSSSNPAACQERVLNILSYVLLAIHNRSSRSNLAGNPAMSTGDWDPKAMT+HIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIVITEPLADLVADNPLVLHLPIVWSLVGCVRVLLDGADRTIAVERLQSAMAPLANHLGFSTDESLVEQELMSVFNGKQGL KRKGATTAP XXXXXXXXXXXXX TGDILVRSSRAQTSSLNVTAQDYSHRGRSAINMLALEPSPAPRRRGLP SATRQGVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SRAGALTR+PAA G SLSIPAPFVPKQSMLQLDMPFMGS FLNNNPPAA QPGTDG+SVMIK DLGLPQQGG AA GEPRERDE LL+KL ASRAQ+MREQREQQQSFSADAPVPSLDEA GEG+GVGLEDEDGR
Sbjct: 25 PVLRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVPVDNNGGLLAPYPDGVNGSKLVGLNEHLRGEPTTLNKDEVECVDVFMQNINSFLPLTTIDTVMRAAKATAPXXXXXXXXXXXXXXXXXX-EERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAARDQIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNNIISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAGIPSSSNPAACQERVLNILSYVLLAIHNRSSRSNLAGNPAMSTGDWDPKAMTDHIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIVITEPLADLVADNPLVLHLPIVWSLVGCVRVLLDGADRTIAVERLQSAMAPLANHLGFSTDESLVEQELMSVFNGKQGLTKRKGATTAPXXXXXXXXXXXXXXXXXX--TGDILVRSSRAQTSSLNVTAQDYSHRGRSAINMLALEPSPAPRRRGLPTSATRQGVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAGALTRVPAAHGRSLSIPAPFVPKQSMLQLDMPFMGSCFLNNNPPAAVQPGTDGLSVMIKGDLGLPQQGGHAAAAGE-GEPRERDEALLNKLVASRAQIMREQREQQQSFSADAPVPSLDEAAGEGNGVGLEDEDGR 722
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI) HSP 1 Score: 160 bits (405), Expect = 4.350e-37 Identity = 127/449 (28.29%), Postives = 211/449 (46.99%), Query Frame = 2
Query: 200 LRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVSGDNNGGLLAPYQDGVNGSKVVG-LNEHLRGESTTLNKDEVECVDVFMQNINSFLPLTTIDTVKRAAKATAPAVGGGXXXXXXXXXXXTETEERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAAREEIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNDIISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAGVPSSSNP---AACQERVLNILSYVLLAIHNRSSRSNLAGN------PAMSTGDWDPKAMTEHIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIV--ITEPLADLVADNPLVLHLPIVWSLVGCVRVLLDGADRTIAVERLQSAMAPLANHLGFSTDESLVEQELMSVFNGK 1510
LRTTCDACT K+KC+G PC RC + +C Y KKRCGPKRRK S D++ DG +G G L E G ++++ E + F ++N F+PLT + ++ A V G +E EE + +HA KA+L G +A+GA F + + + A+ +K+CFDA PE+V+ +L++ +Y H +D SK+ RYIG A Q+ ++ S +V S+ + + + ++P + + +NP R++ + S+VLL ++ ++ R A P M+T + EA+ LL S P + ++ L+ YF + QA++ + P+A + +P VL+ P+ W++ CV L + + M PL L ++ V ++ V+ GK
Sbjct: 53 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSD------DDGSHGGSFAGHLGEGGAGVRVLTSREQ-EFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAA--------SEAEENT--YHARKAVLLGCVAVGAVFCGDQSSAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLVVGGHVRDSLRVLSTFLHVTCNKEIRP----QKVHLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMAT-------LGAMANEAELLL---SMMEDPGSFAVIVIKTLKGYFLLMKG-KEQAVLDAVAMPVAKALEADPAVLNFPLCWTMCQCVSSFLRRKGCHSVAASMDAIMQPLRMTLAYANACCGVALNVVGVYAGK 469
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.810e-34 Identity = 128/452 (28.32%), Postives = 206/452 (45.58%), Query Frame = 2
Query: 200 LRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVSGDNNGGLLAPYQDGVNGSKVVGLNEHLRGESTTLNKDEVECVDVFMQNINSFLPLTTIDTVKRAAKATAPAVGGGXXXXXXXXXXXTETEERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAAREEIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNDIISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAGVPSSSNP---AACQERVLNILSYVLLAIHNRSSRSNLAGN------PAMSTGDWDPKAMTEHIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIV--ITEPLADLVADNPLVLHLPIVWSL----VGCVRVLLDGADRTIAVERLQSAMAPLANHLGFSTDESLVEQELMSVFNGK 1510
LRTTCDACT K+KC+G PC RC + +C Y KKRCGPKRRK S D++ DG +G G G L E E + F ++N F+PLT + ++ A V G +E EE + +HA KA+L G +A+GA F + + + A+ +K+CFDA PE+V+ +L++ +Y H +D SK+ RYIG A Q+ ++ S V S+ + + + ++P RA +NP R++ + S+VLL ++ ++ R A P ++T + EA+ LL S P + ++ L+ YF + QA++ + P+A + +P VL+ P+ W++ CV L + + M PL L ++ V ++ V+ GK
Sbjct: 179 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSD------DDGSHGGNFAGHLGEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAA--------SEAEENT--YHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQTYRELAQSNKLGVGEYVRDSLRVLSTFLHVTCNNEIRPEEVDLRA----ETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLAT-------LGAMANEAELLL---SMMEDPGSFAVIVIKTLKGYFLLMKG-KEQAVLDAVAMPVAKALEADPAVLNFPLCWTMWVHACQCVSSFLRRKGCHSVAASMDAIMQPLRLTLAYANACCGVALNVVGVYAGK 599
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.380e-33 Identity = 121/402 (30.10%), Postives = 190/402 (47.26%), Query Frame = 2
Query: 203 RTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVSGDNNGGLLAPYQDGVNGSKVVG-LNEHLRGESTTLNKDEVECVDVFMQNINSFLPLTTIDTVKRAAKATAPAVGGGXXXXXXXXXXXTETEERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAAREEIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNDIISDSP-----GALVASLTFVSVILYDAKVVSSIGCLVK-PPGSSNRAGVPSSSNPAACQERVLNILSYVLLAIHNRSSRSNLAGN------PAMSTGDWDPKAMTEHIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIV--ITEPLADLVADNPLVLHLPIVWSLVG 1363
RTTCDACT K+KC+G PC RC + +C Y KKRCGPKRRK S D++ DG + V G L E G L E E + F ++N F+PLT + ++ A V G +E EE + +HA KA+L G +A+GA F + + + A+ +K+CFDA PE+V +L++ +Y H +D SK+ RYIG A Q+ ++ S G + SL +S L+ + C + P + G + R++ + S+VLL ++ ++ R A P M+T + EA+ LL S P + ++ L+ YF + QA++ + P+A + +P VL+ P+ W++ G
Sbjct: 56 RTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGPKRRKLSSRDDSD------DDGNHVGSVAGHLGEGGAG-FRVLTSREQEFLAKFYSSVNKFIPLTCVTVIRDAMNPLPLDVVPGLAA--------SEAEENT--YHARKAVLLGCVAVGAVFSGDQASAGAYMSRAQIHLKDCFDALIPEVVNCYLVMVVYHLHFLDRSKVYRYIGFAQQACRELAQSNKLGVGGHVRDSLRVLSTFLH-------VTCNKEIRPEEVDLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMAT-------LGAMANEAELLL---SMMEDPGSFAVIVIKTLKGYFLLMKG-KEQAVLDAVAMPVAKALEADPAVLNFPLCWTMRG 422
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: A0A2R5GJI5_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJI5_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.560e-6 Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 2
Query: 203 RTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGV 340
+ C+ACT AK KCNG++PC+RC KN+ C Y FK+R GP + + +
Sbjct: 12 KAACEACTKAKCKCNGKRPCLRCEKKNLVCVYAFKRRRGPPKNRAL 57
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: A0A2R5GHL8_9STRA (Xylanolytic transcriptional activator xlnR n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHL8_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.010e-5 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 2
Query: 197 VLRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVSGDN 352
+L+ +CDACTS+KVKC+G PCVRC +++ C Y K++ GP+ KG G N
Sbjct: 4 LLKGSCDACTSSKVKCSGGNPCVRCKARDVVCSYRPKRKRGPQ--KGSKGSN 53
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: A0A8G0PJ79_9HYPO (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Trichoderma simmonsii TaxID=1491479 RepID=A0A8G0PJ79_9HYPO) HSP 1 Score: 58.2 bits (139), Expect = 6.820e-5 Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 2
Query: 194 PVLRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCG 319
P LR+ CD C +AK++C G+ PC RC+ +N++C Y+FK + G
Sbjct: 18 PKLRSACDGCHAAKIRCTGDTPCARCARENLRCHYSFKAKIG 59
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Match: W6QQ20_PENRF (Zn(2)-C6 fungal-type DNA-binding domain n=1 Tax=Penicillium roqueforti (strain FM164) TaxID=1365484 RepID=W6QQ20_PENRF) HSP 1 Score: 55.1 bits (131), Expect = 9.580e-5 Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 2
Query: 200 LRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKR 328
LR+ CD C +AKV+C G PC RCS N++C Y+ K + G R
Sbjct: 36 LRSACDGCHAAKVRCTGNLPCARCSGDNLECHYSLKAKIGKPR 78 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig673.17636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig673.17636.1 >prot_Ecto-sp13_S_contig673.17636.1 ID=prot_Ecto-sp13_S_contig673.17636.1|Name=mRNA_Ecto-sp13_S_contig673.17636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=842bp MPPMQPGQQPKRRRRRRRPGEEEEPVLRTTCDACTSAKVKCNGEKPCVRCback to top mRNA from alignment at Ecto-sp13_S_contig673:11186..18874- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig673.17636.1 ID=mRNA_Ecto-sp13_S_contig673.17636.1|Name=mRNA_Ecto-sp13_S_contig673.17636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7689bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:11186..18874- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig673:11186..18874- >mRNA_Ecto-sp13_S_contig673.17636.1 ID=mRNA_Ecto-sp13_S_contig673.17636.1|Name=mRNA_Ecto-sp13_S_contig673.17636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2526bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:11186..18874- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |