mRNA_Ecto-sp13_S_contig673.17632.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig673.17632.1
Unique NamemRNA_Ecto-sp13_S_contig673.17632.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: D7G769_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G769_ECTSI)

HSP 1 Score: 557 bits (1436), Expect = 3.350e-196
Identity = 287/297 (96.63%), Postives = 290/297 (97.64%), Query Frame = 1
Query:    4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQDQHILLKSIKPPLGG 894
            VENYLMKGLPRHELE SIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTR+ELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSE GVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFR SRQAEGLAKVAGL+ADEFTRKLGDE RAKKEGDD +FSTKDTLRDVMRETFPELEARQLHALESLADQR DGRWGFANIEKWGFRTLQEVQDQHILLKSIKPP GG
Sbjct:  207 VENYLMKGLPRHELENSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRQELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEAGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRASRQAEGLAKVAGLSADEFTRKLGDEFRAKKEGDDETFSTKDTLRDVMRETFPELEARQLHALESLADQRGDGRWGFANIEKWGFRTLQEVQDQHILLKSIKPPRGG 503          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A7S3XPU0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPU0_HETAK)

HSP 1 Score: 152 bits (383), Expect = 1.760e-39
Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    1 QVENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLG------ASECLYNAGLGLRYVQVPAIMSAV 441
            +   YL+KG+P+ ELE +I+E+F  ADGDG+G LDRAEF+RCLKESGLGFTRRELN++LT++D+NGDG++ Y+EF+P+C SM+VE+++ ++QE P +E  L   +       N       + G      A   L    LGL  VQ+ A++S+V
Sbjct:  201 EAREYLLKGMPQQELEQAIREVFAQADGDGNGTLDRAEFLRCLKESGLGFTRRELNIILTMVDQNGDGLVQYEEFIPICLSMLVELVAHQLQETPPDEAQLGRLIAEEFAAQNAASPKRAAEGRIHLKDAMAALQKLDLGLTKVQIHAVLSSV 353          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A5A8CPR3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPR3_CAFRO)

HSP 1 Score: 140 bits (353), Expect = 2.470e-34
Identity = 97/298 (32.55%), Postives = 165/298 (55.37%), Query Frame = 1
Query:    1 QVENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQE--IPEEEMALRERVYSILVEANG-GDEHMTSLGASECLYNAGLGLRYVQVPAIM-SAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDE---LRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQDQHILLKS 873
            + E YL+ G+PR +LE +++++F  AD DGSG L R EF   L+ESGLG TR+E+N++L  +DE+ DG IDY+EFLPVCF+++VEI+S ++++  IP+EE+ LR+   S+  +A+  G+  +        L +A +GL  VQ+ A+M  AV   + G+V     A   AG++  +  +++   ++AE         +R+   L+ VAG++   FT  L      L  + +G   +      L D+       LE  ++  +  L D   DG      + ++ F ++  V +QH+L ++
Sbjct:  165 ETEAYLLHGMPREKLENTLRDMFNRADADGSGKLSRTEFQTALRESGLGLTRQEVNVLLAEVDEDEDGEIDYEEFLPVCFNVLVEIVSKQLEDRRIPKEEVDLRDFFVSLFRDADSEGEGRLAPAVIKATLQSADIGLSIVQLTALMVEAVPDDDSGLVEYSSFAAVAAGIVSRMLAVQTSSDKAAE------LSEARETGELSLVAGMDRAAFTEALNHAIGLLDPQAQGVAPAAEVGGALADMG------LEDHEVAVILQLGDLG-DGSVDLDYVGRFAFDSIAAVAEQHMLAEA 449          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A836CFN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFN6_9STRA)

HSP 1 Score: 135 bits (340), Expect = 9.150e-32
Identity = 77/198 (38.89%), Postives = 122/198 (61.62%), Query Frame = 1
Query:    1 QVENYLMKGLPRHELETSIQE-------------IFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQ----------EIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVS-EDGVVAAKEVADAVAGVMCALKQL 522
            + +++L+KGLP+ ELE SI+              +FRG D DG+G LDRAEF++CL++SGLGFTRRELNL++T++D N DGVIDY+EF+PV F+M++++++ ++Q          ++P         V ++L       + ++   A +C+  A LGL  VQV A MS       +G    +E+A+AVAG++ A+ +L
Sbjct:  212 EAKDFLLKGLPKGELEASIRXXXXXXXXXXXXXXVFRGVDVDGNGTLDRAEFLKCLRDSGLGFTRRELNLMMTVVDRNNDGVIDYEEFVPVAFNMLLDMVARQLQLREETALCDHDVPRXXXXXXXXVRAVL--RADEQQRISHTDAIQCIMGANLGLPLVQVHAAMSECKEDPSEGTFNCEELAEAVAGMVMAISEL 407          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A1Y1HXM2_KLENI (Troponin C n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXM2_KLENI)

HSP 1 Score: 115 bits (288), Expect = 3.190e-25
Identity = 88/296 (29.73%), Postives = 148/296 (50.00%), Query Frame = 1
Query:    4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGG-DEHMTSL-------GASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPE---LEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQDQH 858
            V+  L+ G+PR ELE  ++ +FR AD +G   LDR EF  CL+ + +G TR+E+NL+L   D NGDG I Y+EFLP+CF+++VE  SD++  + E++    + +  +LV+A    D   T L       G    L   GLGL  +QV  +MS     E+G V  +  A   A ++ +L  +  +   +A  E +     SR A G+ ++  L+ D     L +  RA  E    +    + + +V++E       L  R ++ L +  ++  +G   +  +  + F  LQ +  + 
Sbjct:  170 VQTQLLHGMPRAELEAMMRGVFRAADVNGDRRLDRKEFKNCLRHADVGLTRQEINLLLAKADRNGDGSISYEEFLPLCFNILVERFSDEL--VREKQARSADDIEVLLVQAFAAEDRERTGLLLQRQIKGVLTDLSREGLGLTRMQVLTLMSEAEPDEEGYVNYRRFASGAAHMIHSLVDVSHQADRAAAIESL-----SRSA-GVQQLRNLSRDAVRGILEEAFRAADEQGAGALERSEVI-EVLQELASSQLGLTPRDVNCLMAALEENSEGAIEYEQLISFTFDVLQHLDREE 456          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A830HGW7_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HGW7_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 3.740e-24
Identity = 82/284 (28.87%), Postives = 144/284 (50.70%), Query Frame = 1
Query:   13 YLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAG---LGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEG--DDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQ 849
            YL++G+ R +LE  +  +FR AD DGSG LDR+EF  CLK + LG T++++N+++  +D +GDG I Y EF+P+CF+++VE   D +  I +      + + S+LV+A G D   +      CL +     LGL  +Q+ +IMS    ++D +V   + A A A ++ ++   E++         ++E   +    GL++ +      F  +  D   A K G  D A   T     + +  T   L   ++ A+ +  D+ EDGR  +  +  +    L  ++
Sbjct:  167 YLLRGMSREQLEQMMANVFRAADSDGSGYLDRSEFRNCLKSAELGLTKKDINMLMAEVDIDGDGKITYDEFVPLCFNVLVERFKDNI--IQDRAYNSTDGLESLLVDAFG-DGFASIKELRSCLEDLSYEILGLTNMQIFSIMSMAEKNDDNLVDCLKFAKAAANMIYSMIDNEAQSKRMEAIRAMSESDAAHLMRGLSQESVKEIMAFAFEQAD---ADKSGYLDRAEMMT---CLESLGSTDLALRPHEIRAIANAIDENEDGRVSYKELLDFMLDILMHIE 441          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A7S0D1Q4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D1Q4_MICPS)

HSP 1 Score: 111 bits (278), Expect = 1.400e-23
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 1
Query:    4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKV 273
            V+ +L+ G+PR ELE  ++ +F  AD DGSGALDR EF RCL+ + LG TR+E+NL+LT +DENGDG+I Y+E  P+CF+++VE   D V
Sbjct:  250 VQMHLLHGMPRDELEDMMRNVFEAADVDGSGALDRKEFSRCLRSAELGLTRKEINLLLTEVDENGDGLISYEEITPLCFNILVERFKDDV 339          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: C1EEG1_MICCC (Radial spoke protein 7 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEG1_MICCC)

HSP 1 Score: 109 bits (273), Expect = 4.170e-23
Identity = 61/164 (37.20%), Postives = 96/164 (58.54%), Query Frame = 1
Query:    4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGAS-------------ECLYNAGLGLRYVQVPAIMSAVTVSED 456
            VE +L+ G+PR +LE  +  +F  AD DGSGALDR EF RCLK + LG TR+E+NL+L+ +D +GDG++ Y EF+P+CF+++VE   D V  + E+ +   + +   L+E     +   + GA+             + +    LGL  +Q+ +IMS   V E+
Sbjct:  173 VEMHLLHGIPREQLEQMMFSVFNAADTDGSGALDRKEFARCLKSAELGLTRKEINLLLSEVDADGDGMVTYDEFVPLCFNILVERFKDDV--LAEQALNSYDDLTQTLLEEFQTVDEDDNAGAATGRLKFRRIRHVLDAMSEEMLGLSRLQIASIMSEAKVDEE 334          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A061SBG2_9CHLO (Radial spoke protein 7 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SBG2_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 4.510e-23
Identity = 90/283 (31.80%), Postives = 137/283 (48.41%), Query Frame = 1
Query:    1 QVENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKV--QEIPEEEMALRERVYSILVEANGGDEHMTSLGAS-----------ECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDV------MRETFPELEARQLHALESLADQREDG 792
            +VE +L+ G+PR +LE  +  IF+ AD DGSG L+R EF  CLK + LG TR+E+N +LT +DE+ DG + Y EF+P+CF+++VE   D+V   E+      L   + S L +    DEH    GA            E L    LGL   Q+ A+M       +G++   + A+  AG++  +  L      + ++  +       Q EG   + GL+ DE    L    RA +E D     T  TL ++      M      L  R ++A+ S  D  E+G
Sbjct:  159 EVEEFLLHGMPRQQLEAMMMNIFQRADADGSGKLNRTEFRDCLKAAELGLTRKEINAILTEVDEDHDGQVSYSEFMPLCFNILVERFKDEVLSNEVLRSTDELERELVSTLSQY---DEH----GAGKLPQRLIKRVLEDLSFQFLGLSTFQILAVMGEADPDSEGMIEITKFAEMAAGMIYTMVDL------AGQNLRIAAVGQLSQTEGARYLRGLSLDETRETL---QRAFQEADADGNGTL-TLAEIVHVLNAMGTDQLHLTQRDINAIMSAIDDDENG 424          
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A1V9Z952_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z952_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.170e-22
Identity = 79/289 (27.34%), Postives = 138/289 (47.75%), Query Frame = 1
Query:   16 LMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEAN-GGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGR-WGFANIEKWGFRTLQEVQDQHILLKSI 876
            L  GL R E E+ ++EI R  D D  G++ RAEF+ CL++  +G TR+E+NLV+  + +NGD  I Y E LP  F +++   ++ + E P  E A+  ++       +  G  +++       L  AGLGL  +Q  A++S     E+  V  +  A  +A ++  +   +++   +A        R+ R +E    V G+N  EF   L     A  EG+    S  D + + ++  FP +  + L +L +L D         +  +   GF+ LQ +Q+  +L   +
Sbjct:  176 LFHGLLRDEFESLMREILRHIDLDNIGSVSRAEFLSCLQDGDVGLTRKEVNLVMYSVPDNGDNAIVYAEVLPELFDILLHAHANDLLETPRSEEAVETQLNKAFASGDEDGTGYLSFSALKTTLRLAGLGLTRIQTVALLSQAVEEEEDSVNYESFAKRIAPMVLRMVDYDTQTQIAAA------VRSYRSSEDYFTVQGMNQHEFANALTIAFEAIDEGERGCLSRHD-ITEAIQNAFPGISRQHLSSLVALTDTNHASMDLEYGPVVHNGFQALQWLQEYAVLSAQV 457          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G769_ECTSI3.350e-19696.63N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G769_ECT... [more]
A0A7S3XPU0_HETAK1.760e-3947.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5A8CPR3_CAFRO2.470e-3432.55Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A836CFN6_9STRA9.150e-3238.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Y1HXM2_KLENI3.190e-2529.73Troponin C n=1 Tax=Klebsormidium nitens TaxID=1052... [more]
A0A830HGW7_9CHLO3.740e-2428.87Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A7S0D1Q4_MICPS1.400e-2354.44Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C1EEG1_MICCC4.170e-2337.20Radial spoke protein 7 n=1 Tax=Micromonas commoda ... [more]
A0A061SBG2_9CHLO4.510e-2331.80Radial spoke protein 7 n=2 Tax=Tetraselmis sp. GSL... [more]
A0A1V9Z952_9STRA1.170e-2227.34Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig673contigEcto-sp13_S_contig673:228..2960 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score552.7
Seed ortholog evalue1e-154
Seed eggNOG ortholog2880.D7G769
Model size1000
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs29EMT@1,2RMSV@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_010840.1
Cds size879
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig673.17632.1prot_Ecto-sp13_S_contig673.17632.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig673 246..2857 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463925.5174842-UTR-Ecto-sp13_S_contig673:227..2451681463925.5174842-UTR-Ecto-sp13_S_contig673:227..245Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig673 228..245 +
1681463925.6015222-UTR-Ecto-sp13_S_contig673:2857..29601681463925.6015222-UTR-Ecto-sp13_S_contig673:2857..2960Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig673 2858..2960 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463925.5301046-CDS-Ecto-sp13_S_contig673:245..4051681463925.5301046-CDS-Ecto-sp13_S_contig673:245..405Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 246..405 +
1681463925.5404782-CDS-Ecto-sp13_S_contig673:947..10391681463925.5404782-CDS-Ecto-sp13_S_contig673:947..1039Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 948..1039 +
1681463925.5503714-CDS-Ecto-sp13_S_contig673:1296..14431681463925.5503714-CDS-Ecto-sp13_S_contig673:1296..1443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 1297..1443 +
1681463925.568646-CDS-Ecto-sp13_S_contig673:1965..21811681463925.568646-CDS-Ecto-sp13_S_contig673:1965..2181Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 1966..2181 +
1681463925.5834718-CDS-Ecto-sp13_S_contig673:2593..28571681463925.5834718-CDS-Ecto-sp13_S_contig673:2593..2857Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 2594..2857 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig673.17632.1

>prot_Ecto-sp13_S_contig673.17632.1 ID=prot_Ecto-sp13_S_contig673.17632.1|Name=mRNA_Ecto-sp13_S_contig673.17632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELN
LVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVY
SILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVA
AKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLN
ADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALES
LADQREDGRWGFANIEKWGFRTLQEVQDQHILLKSIKPPLGG*
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mRNA from alignment at Ecto-sp13_S_contig673:228..2960+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig673.17632.1 ID=mRNA_Ecto-sp13_S_contig673.17632.1|Name=mRNA_Ecto-sp13_S_contig673.17632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2733bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:228..2960+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGGAGAACTACCTCATGAAGGGACTGCCACGGCACGAGCTCGAAAC CTCCATACAGGAGATCTTCCGCGGAGCCGATGGTGACGGCAGCGGAGCTC TGGACCGCGCTGAGTTCATCCGGTGTCTCAAGGAGTCGGGCTTGGGCTTC ACGCGACGGGAGCTCAACCTTGTCCTGAGTGAGTCGGGTGGTTCGGATGG TTGTACGTTCGGAGAGCTGCAAACCACGTGTCAGTGAAACGTATGTGTGT TCAGGATACCCTTTCTCGTGTATTTGGTAGACGGTGACGACGTTTTTTGG TGCCGATCGCAAACGTCCACGGTTTGATTGGAGTCTACTGCAGGGGCAGA AAGAGGTATTACCCGGGGAGGTTGTTAAGCGAGGAAGGCGAGGTAGCATG GAAATGGCATGTTTCTTGAACTACGTCATACCGGGAAGCCCTTGAAGTAG TGGCCGGGAAATCGATCTTTCTTTTGATTAAACGTCTGAGAGGCGTGCGC AGACGAGTTGCTACCGATTCAGATCGCATGCCTTTTCTTTGTATCTTCTA CCAATTTGCATGTCTCTCCAACTACATGCGGCCGGATTCATCTCGTGCCG CAAGTACGTGCGGACGGTACGATCCTTGGTTGCTGCATGGTGCACATCCC CCACATCAATCTTTGAACTTTCCTCCGTGATCTTGTGTATTCCTTTGCAT GTACCGCTTGCGCCTGGCAGCTCTCATCGACGAAAACGGCGATGGGGTCA TAGACTACCAGGAGTTCTTGCCTGTGTGCTTCTCCATGATCGTCGAGATC CTAAGCGACAAGGTGCGTACCCTTTGATTGCTGGTGTTGTTTGTCGTCCG ATATTGTCGGCATCGGCTTCAGGTTCGTTCCTGCTCGTTTTGCGTCGCTA CATCTTCTGGCTGTCGGTCACTTCTAAATTCGACGCAAGAAAAACAGCAG ATTATCAACAAGAGCACCAGCTGTGCTTGAAGAGTCATCGAATCCAGCAC ACAATGACATCTGTTTTTCAAGGGGATGAACGTGACGGGGGTGTTGGCGC CATCACGTTATCGAGGCAGGTCCAAGAGATCCCCGAGGAAGAGATGGCAC TTCGCGAGCGCGTCTACAGCATCCTAGTCGAGGCCAACGGGGGCGACGAG CACATGACCTCCTTGGGTGCCTCGGAGTGCCTCTACAACGCCGGGCTAGG GCTGCGGTACGTGCAGGTGAAAATCCGGTTCGGGTGTCGGTTGCTACTGA AAGAGAGGAGGGCTATGTACGTGAAGGGTTGTGAGAGCGCCGTGGTGCTC GTGTGCCTTCTGTTGGTACTGCCGGCTGAGGGGAAGAGGCAACCAGATTT TGAGAGAGACTAGTCTTATCACCTTCCTGCGCAATCGTTGTTCTGTCTGG TCCTCCGGCGGAAAACCGCGCAAACAGAGATGGTCTTTTGGGCAAACGAT GGGGTCGGTTCTATTGAGCGGCCGAAAGAAAACAAAAGCATTTTCACCTC CACATTTCCCGTGTTGATCCTAAAGATAACGAAACGAATTTCAGTTCACA CGCGGAAAGTGCAAGAATGATTCCTCAACAATCAAATTAAAACCCAGAAA GAAGTGTGACACCCAGTTTCCCACACCTGACTGAAGAAACATGAACCGTT GCTAGGCAAACCCTCCGGCATCGTTGTCAACACCACCAATTTCTCTCGAA ACCTTCCCGCTCGGGGTCCGTCCGTACCACTTACGTAGGTGCCGGCGATC ATGTCCGCGGTCACCGTCAGCGAGGACGGAGTGGTGGCGGCGAAGGAAGT AGCCGACGCCGTGGCGGGGGTGATGTGCGCGCTGAAGCAGCTGGAGAGCC GACAGCACGAGAGCGCGGAAGACGAGTGCGTGACCGAGTTCAGGACCTCG CGGCAGGCCGAGGGCTTGGCCAAGGTTGCCGGTCTGAATGCGGACGAGTT TACGGTGAGAAGAGAGAATTCGAGCAGGACACGGACTCACTTGGAGTCGA GTTGTGTTTGAAACCTCTTTGTCGGCATGTAGCCTACTAGGGCGTCAAGG GATGGTTTTCTCGCACTTCTCAGGAGGGGATGGATTGCTGGTAGCATGCG TCTCCGCACTTATCCCACCGGAGTTTCCAAATATAAACCGCGGAATGTAC GTGTTTCGCACCCGGTCGACTGGGGGAAGCACGTCTCATGGACATCGCAC ATGAGTGGGGAGGAATCCCGCCTGGCATTGTGTATAGTTCATGTGTATCA TCACAATACCAGACACGAAACAGGAGGTCCGCTCGATCGCGTGTCAACGC GACAAAAATCCACAAGCTTCTGAACCCCAACCCCCTCCGGGCTGTTGTTC TTTCCACGCACCGCAGCGCAAGCTCGGAGATGAGCTTAGGGCGAAGAAAG AAGGCGACGACGCGAGTTTCTCAACAAAGGACACCCTCCGTGATGTCATG AGGGAGACGTTCCCGGAGCTCGAGGCGCGGCAGCTGCACGCGCTAGAGAG CCTGGCGGACCAGAGGGAAGACGGCCGCTGGGGCTTCGCGAACATCGAAA AGTGGGGCTTCAGGACTTTGCAAGAGGTCCAAGACCAGCACATCCTCTTG AAGTCGATCAAGCCGCCGCTAGGAGGGTAGGTAGAATTAGCATGATGCGA CGAGCGGCGGACAGGTGGGGGATGCGACAGAGATACAGATCGAGCGGGTA ATAAACAGAGGCAGAGGAGGAGAGAGATACACG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig673:228..2960+

>mRNA_Ecto-sp13_S_contig673.17632.1 ID=mRNA_Ecto-sp13_S_contig673.17632.1|Name=mRNA_Ecto-sp13_S_contig673.17632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:228..2960+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGGACTGCCACGGCACGAGCTCGAAACCTCCATACAGGAGATCTT
CCGCGGAGCCGATGGTGACGGCAGCGGAGCTCTGGACCGCGCTGAGTTCA
TCCGGTGTCTCAAGGAGTCGGGCTTGGGCTTCACGCGACGGGAGCTCAAC
CTTGTCCTGACTCTCATCGACGAAAACGGCGATGGGGTCATAGACTACCA
GGAGTTCTTGCCTGTGTGCTTCTCCATGATCGTCGAGATCCTAAGCGACA
AGGTCCAAGAGATCCCCGAGGAAGAGATGGCACTTCGCGAGCGCGTCTAC
AGCATCCTAGTCGAGGCCAACGGGGGCGACGAGCACATGACCTCCTTGGG
TGCCTCGGAGTGCCTCTACAACGCCGGGCTAGGGCTGCGGTACGTGCAGG
TGCCGGCGATCATGTCCGCGGTCACCGTCAGCGAGGACGGAGTGGTGGCG
GCGAAGGAAGTAGCCGACGCCGTGGCGGGGGTGATGTGCGCGCTGAAGCA
GCTGGAGAGCCGACAGCACGAGAGCGCGGAAGACGAGTGCGTGACCGAGT
TCAGGACCTCGCGGCAGGCCGAGGGCTTGGCCAAGGTTGCCGGTCTGAAT
GCGGACGAGTTTACGCGCAAGCTCGGAGATGAGCTTAGGGCGAAGAAAGA
AGGCGACGACGCGAGTTTCTCAACAAAGGACACCCTCCGTGATGTCATGA
GGGAGACGTTCCCGGAGCTCGAGGCGCGGCAGCTGCACGCGCTAGAGAGC
CTGGCGGACCAGAGGGAAGACGGCCGCTGGGGCTTCGCGAACATCGAAAA
GTGGGGCTTCAGGACTTTGCAAGAGGTCCAAGACCAGCACATCCTCTTGA
AGTCGATCAAGCCGCCGCTAGGAGGGTAG
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