mRNA_Ecto-sp13_S_contig673.17632.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: D7G769_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G769_ECTSI) HSP 1 Score: 557 bits (1436), Expect = 3.350e-196 Identity = 287/297 (96.63%), Postives = 290/297 (97.64%), Query Frame = 1
Query: 4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQDQHILLKSIKPPLGG 894
VENYLMKGLPRHELE SIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTR+ELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSE GVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFR SRQAEGLAKVAGL+ADEFTRKLGDE RAKKEGDD +FSTKDTLRDVMRETFPELEARQLHALESLADQR DGRWGFANIEKWGFRTLQEVQDQHILLKSIKPP GG
Sbjct: 207 VENYLMKGLPRHELENSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRQELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEAGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRASRQAEGLAKVAGLSADEFTRKLGDEFRAKKEGDDETFSTKDTLRDVMRETFPELEARQLHALESLADQRGDGRWGFANIEKWGFRTLQEVQDQHILLKSIKPPRGG 503
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A7S3XPU0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPU0_HETAK) HSP 1 Score: 152 bits (383), Expect = 1.760e-39 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 1 QVENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLG------ASECLYNAGLGLRYVQVPAIMSAV 441
+ YL+KG+P+ ELE +I+E+F ADGDG+G LDRAEF+RCLKESGLGFTRRELN++LT++D+NGDG++ Y+EF+P+C SM+VE+++ ++QE P +E L + N + G A L LGL VQ+ A++S+V
Sbjct: 201 EAREYLLKGMPQQELEQAIREVFAQADGDGNGTLDRAEFLRCLKESGLGFTRRELNIILTMVDQNGDGLVQYEEFIPICLSMLVELVAHQLQETPPDEAQLGRLIAEEFAAQNAASPKRAAEGRIHLKDAMAALQKLDLGLTKVQIHAVLSSV 353
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A5A8CPR3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPR3_CAFRO) HSP 1 Score: 140 bits (353), Expect = 2.470e-34 Identity = 97/298 (32.55%), Postives = 165/298 (55.37%), Query Frame = 1
Query: 1 QVENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQE--IPEEEMALRERVYSILVEANG-GDEHMTSLGASECLYNAGLGLRYVQVPAIM-SAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDE---LRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQDQHILLKS 873
+ E YL+ G+PR +LE +++++F AD DGSG L R EF L+ESGLG TR+E+N++L +DE+ DG IDY+EFLPVCF+++VEI+S ++++ IP+EE+ LR+ S+ +A+ G+ + L +A +GL VQ+ A+M AV + G+V A AG++ + +++ ++AE +R+ L+ VAG++ FT L L + +G + L D+ LE ++ + L D DG + ++ F ++ V +QH+L ++
Sbjct: 165 ETEAYLLHGMPREKLENTLRDMFNRADADGSGKLSRTEFQTALRESGLGLTRQEVNVLLAEVDEDEDGEIDYEEFLPVCFNVLVEIVSKQLEDRRIPKEEVDLRDFFVSLFRDADSEGEGRLAPAVIKATLQSADIGLSIVQLTALMVEAVPDDDSGLVEYSSFAAVAAGIVSRMLAVQTSSDKAAE------LSEARETGELSLVAGMDRAAFTEALNHAIGLLDPQAQGVAPAAEVGGALADMG------LEDHEVAVILQLGDLG-DGSVDLDYVGRFAFDSIAAVAEQHMLAEA 449
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A836CFN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFN6_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.150e-32 Identity = 77/198 (38.89%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 QVENYLMKGLPRHELETSIQE-------------IFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQ----------EIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVS-EDGVVAAKEVADAVAGVMCALKQL 522
+ +++L+KGLP+ ELE SI+ +FRG D DG+G LDRAEF++CL++SGLGFTRRELNL++T++D N DGVIDY+EF+PV F+M++++++ ++Q ++P V ++L + ++ A +C+ A LGL VQV A MS +G +E+A+AVAG++ A+ +L
Sbjct: 212 EAKDFLLKGLPKGELEASIRXXXXXXXXXXXXXXVFRGVDVDGNGTLDRAEFLKCLRDSGLGFTRRELNLMMTVVDRNNDGVIDYEEFVPVAFNMLLDMVARQLQLREETALCDHDVPRXXXXXXXXVRAVL--RADEQQRISHTDAIQCIMGANLGLPLVQVHAAMSECKEDPSEGTFNCEELAEAVAGMVMAISEL 407
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A1Y1HXM2_KLENI (Troponin C n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXM2_KLENI) HSP 1 Score: 115 bits (288), Expect = 3.190e-25 Identity = 88/296 (29.73%), Postives = 148/296 (50.00%), Query Frame = 1
Query: 4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGG-DEHMTSL-------GASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPE---LEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQDQH 858
V+ L+ G+PR ELE ++ +FR AD +G LDR EF CL+ + +G TR+E+NL+L D NGDG I Y+EFLP+CF+++VE SD++ + E++ + + +LV+A D T L G L GLGL +QV +MS E+G V + A A ++ +L + + +A E + SR A G+ ++ L+ D L + RA E + + + +V++E L R ++ L + ++ +G + + + F LQ + +
Sbjct: 170 VQTQLLHGMPRAELEAMMRGVFRAADVNGDRRLDRKEFKNCLRHADVGLTRQEINLLLAKADRNGDGSISYEEFLPLCFNILVERFSDEL--VREKQARSADDIEVLLVQAFAAEDRERTGLLLQRQIKGVLTDLSREGLGLTRMQVLTLMSEAEPDEEGYVNYRRFASGAAHMIHSLVDVSHQADRAAAIESL-----SRSA-GVQQLRNLSRDAVRGILEEAFRAADEQGAGALERSEVI-EVLQELASSQLGLTPRDVNCLMAALEENSEGAIEYEQLISFTFDVLQHLDREE 456
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A830HGW7_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HGW7_9CHLO) HSP 1 Score: 112 bits (281), Expect = 3.740e-24 Identity = 82/284 (28.87%), Postives = 144/284 (50.70%), Query Frame = 1
Query: 13 YLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAG---LGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEG--DDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGRWGFANIEKWGFRTLQEVQ 849
YL++G+ R +LE + +FR AD DGSG LDR+EF CLK + LG T++++N+++ +D +GDG I Y EF+P+CF+++VE D + I + + + S+LV+A G D + CL + LGL +Q+ +IMS ++D +V + A A A ++ ++ E++ ++E + GL++ + F + D A K G D A T + + T L ++ A+ + D+ EDGR + + + L ++
Sbjct: 167 YLLRGMSREQLEQMMANVFRAADSDGSGYLDRSEFRNCLKSAELGLTKKDINMLMAEVDIDGDGKITYDEFVPLCFNVLVERFKDNI--IQDRAYNSTDGLESLLVDAFG-DGFASIKELRSCLEDLSYEILGLTNMQIFSIMSMAEKNDDNLVDCLKFAKAAANMIYSMIDNEAQSKRMEAIRAMSESDAAHLMRGLSQESVKEIMAFAFEQAD---ADKSGYLDRAEMMT---CLESLGSTDLALRPHEIRAIANAIDENEDGRVSYKELLDFMLDILMHIE 441
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A7S0D1Q4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D1Q4_MICPS) HSP 1 Score: 111 bits (278), Expect = 1.400e-23 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKV 273
V+ +L+ G+PR ELE ++ +F AD DGSGALDR EF RCL+ + LG TR+E+NL+LT +DENGDG+I Y+E P+CF+++VE D V
Sbjct: 250 VQMHLLHGMPRDELEDMMRNVFEAADVDGSGALDRKEFSRCLRSAELGLTRKEINLLLTEVDENGDGLISYEEITPLCFNILVERFKDDV 339
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: C1EEG1_MICCC (Radial spoke protein 7 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEG1_MICCC) HSP 1 Score: 109 bits (273), Expect = 4.170e-23 Identity = 61/164 (37.20%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 4 VENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGAS-------------ECLYNAGLGLRYVQVPAIMSAVTVSED 456
VE +L+ G+PR +LE + +F AD DGSGALDR EF RCLK + LG TR+E+NL+L+ +D +GDG++ Y EF+P+CF+++VE D V + E+ + + + L+E + + GA+ + + LGL +Q+ +IMS V E+
Sbjct: 173 VEMHLLHGIPREQLEQMMFSVFNAADTDGSGALDRKEFARCLKSAELGLTRKEINLLLSEVDADGDGMVTYDEFVPLCFNILVERFKDDV--LAEQALNSYDDLTQTLLEEFQTVDEDDNAGAATGRLKFRRIRHVLDAMSEEMLGLSRLQIASIMSEAKVDEE 334
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A061SBG2_9CHLO (Radial spoke protein 7 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SBG2_9CHLO) HSP 1 Score: 109 bits (272), Expect = 4.510e-23 Identity = 90/283 (31.80%), Postives = 137/283 (48.41%), Query Frame = 1
Query: 1 QVENYLMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKV--QEIPEEEMALRERVYSILVEANGGDEHMTSLGAS-----------ECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDV------MRETFPELEARQLHALESLADQREDG 792
+VE +L+ G+PR +LE + IF+ AD DGSG L+R EF CLK + LG TR+E+N +LT +DE+ DG + Y EF+P+CF+++VE D+V E+ L + S L + DEH GA E L LGL Q+ A+M +G++ + A+ AG++ + L + ++ + Q EG + GL+ DE L RA +E D T TL ++ M L R ++A+ S D E+G
Sbjct: 159 EVEEFLLHGMPRQQLEAMMMNIFQRADADGSGKLNRTEFRDCLKAAELGLTRKEINAILTEVDEDHDGQVSYSEFMPLCFNILVERFKDEVLSNEVLRSTDELERELVSTLSQY---DEH----GAGKLPQRLIKRVLEDLSFQFLGLSTFQILAVMGEADPDSEGMIEITKFAEMAAGMIYTMVDL------AGQNLRIAAVGQLSQTEGARYLRGLSLDETRETL---QRAFQEADADGNGTL-TLAEIVHVLNAMGTDQLHLTQRDINAIMSAIDDDENG 424
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Match: A0A1V9Z952_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z952_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.170e-22 Identity = 79/289 (27.34%), Postives = 138/289 (47.75%), Query Frame = 1
Query: 16 LMKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEAN-GGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEDGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRTSRQAEGLAKVAGLNADEFTRKLGDELRAKKEGDDASFSTKDTLRDVMRETFPELEARQLHALESLADQREDGR-WGFANIEKWGFRTLQEVQDQHILLKSI 876
L GL R E E+ ++EI R D D G++ RAEF+ CL++ +G TR+E+NLV+ + +NGD I Y E LP F +++ ++ + E P E A+ ++ + G +++ L AGLGL +Q A++S E+ V + A +A ++ + +++ +A R+ R +E V G+N EF L A EG+ S D + + ++ FP + + L +L +L D + + GF+ LQ +Q+ +L +
Sbjct: 176 LFHGLLRDEFESLMREILRHIDLDNIGSVSRAEFLSCLQDGDVGLTRKEVNLVMYSVPDNGDNAIVYAEVLPELFDILLHAHANDLLETPRSEEAVETQLNKAFASGDEDGTGYLSFSALKTTLRLAGLGLTRIQTVALLSQAVEEEEDSVNYESFAKRIAPMVLRMVDYDTQTQIAAA------VRSYRSSEDYFTVQGMNQHEFANALTIAFEAIDEGERGCLSRHD-ITEAIQNAFPGISRQHLSSLVALTDTNHASMDLEYGPVVHNGFQALQWLQEYAVLSAQV 457 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig673.17632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig673.17632.1 >prot_Ecto-sp13_S_contig673.17632.1 ID=prot_Ecto-sp13_S_contig673.17632.1|Name=mRNA_Ecto-sp13_S_contig673.17632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp MKGLPRHELETSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNback to top mRNA from alignment at Ecto-sp13_S_contig673:228..2960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig673.17632.1 ID=mRNA_Ecto-sp13_S_contig673.17632.1|Name=mRNA_Ecto-sp13_S_contig673.17632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2733bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:228..2960+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig673:228..2960+ >mRNA_Ecto-sp13_S_contig673.17632.1 ID=mRNA_Ecto-sp13_S_contig673.17632.1|Name=mRNA_Ecto-sp13_S_contig673.17632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:228..2960+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |