mRNA_Ecto-sp13_S_contig666.17531.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig666.17531.1
Unique NamemRNA_Ecto-sp13_S_contig666.17531.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 873 bits (2255), Expect = 0.000e+0
Identity = 448/475 (94.32%), Postives = 453/475 (95.37%), Query Frame = 1
Query:    1 MLRRGSAPAQLWSIAGLKAAGAKFWGPLTNVVTPQKLFLFLLFQARPLTPAFPRFASLSQIVYRRLLRVLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMTSVLYVDMNNPAPIGKVSLAGMINSAQNKGVAQSGLPKAVASPKDLNPKGAEGAAKEEDDPRPINGTGVSGGSSVQKSRRVKKPRGGTV 1425
            MLRRGSAPAQLWSIAGLKAAGA+FWGPLTNVVTPQKLFLFLLFQ                IVYRRLLR+LYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLR LSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIK ALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGA+ATMTSVLYVDMNNPAPIGKV LAGMINSAQNKGVAQSGLPK VA+PKDLNPKGAEGA+ EED PRPINGTGVSGGSSVQKSRRVKKPRGGTV
Sbjct:    1 MLRRGSAPAQLWSIAGLKAAGARFWGPLTNVVTPQKLFLFLLFQ----------------IVYRRLLRLLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNPAPIGKVPLAGMINSAQNKGVAQSGLPKVVAAPKDLNPKGAEGASIEEDGPRPINGTGVSGGSSVQKSRRVKKPRGGTV 459          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 355 bits (910), Expect = 5.070e-114
Identity = 191/413 (46.25%), Postives = 265/413 (64.16%), Query Frame = 1
Query:  175 SQIVYRRLLRVLYRLQVQVWRLVRKHD-PQPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMT-SVLYVDMNNPAPIGKVSLAGMINSAQN-KGVAQSGLPKAVASPKDLNPKGAEGAAKEED-------DPRPINGTGVSGGSSV 1383
            ++++YR+  R L+     +W+     D P+ YE SVLGF+EP+L  L+  + V Y +   + +LI  GW      A++++ ++Y  Y  YFV+E K+ +L  W+PSL+ D+R+ +I +RS SV+ W + + +  E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + E++  IK AL+ +P +D+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E+TRVV            ++D+ +   +G+  + G+++     + VA SG           N    +GA ++ D        P PIN     GGSSV
Sbjct:   21 TRLLYRKACRALHAFHHFLWKRAGILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKE-LGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDISVGFNVPPNPINPLNSGGGSSV 432          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.000e-111
Identity = 190/413 (46.00%), Postives = 265/413 (64.16%), Query Frame = 1
Query:  175 SQIVYRRLLRVLYRLQVQVWRLVRKHD-PQPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMT-SVLYVDMNNPAPIGKVSLAGMINSAQN-KGVAQSGLPKAVASPKDLNPKGAEGAAKEED-------DPRPINGTGVSGGSSV 1383
            ++++YR+  R L+     +W+     D P+ YE SVLGF+EP+L  L+  + V Y +   + +LI  GW      A++++ ++Y  Y  YFV+E K+ +L  W+PSL+ D+R+ +I +RS SV+ W + + +  E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + E++  IK AL+ +P +D+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E+TRVV            ++D+ +   +G+  + G+++     + VA SG           N    +GA ++ D        P PIN     GG+SV
Sbjct:  211 TRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKE-LGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDFSVGFNVPPNPINPLNSGGGNSV 622          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 327 bits (837), Expect = 1.860e-102
Identity = 175/387 (45.22%), Postives = 234/387 (60.47%), Query Frame = 1
Query:   79 PLTNVVTPQKLFLFLLFQARPLTPAFPRFASLSQIVYRRLLRVLYRLQVQVWRLVRKHDPQP-YEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMTSVLYVDMNNPAPIGKVSLAGMINSA 1236
            PL  ++ P+ L  +L+F+                  Y R LR+ Y LQ  + RL++K  P P Y Q+VLGF+EPR   LSR   + Y +   +  +     N  P L ++ + + Y  YAGYF++E +RF  P W P L  DKR+ +I +RS SV  W+I ++ + + IS +  +P++S+LA GG+GG+AIGLA KDV+SNF GGLMLL+ EPF PGD +TF   G    G+VERVGWYQTR+R RDTRP YVPN  F +TMVTNMDRITHRKFES F ++     +V  +L  IK AL+  P +DLLSPFR +L+     GL+ +V+CYFATKS DEFL LQQ   LEV R V+    T              IG + + GM+  A
Sbjct:   77 PLRVLMRPRDLLAYLIFRT----------------CYSRALRLGYLLQTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLIDLNIRPGLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSNFVGGLMLLITEPFTPGDFITFLYQGQWMIGKVERVGWYQTRIRNRDTRPVYVPNAFFVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLTWAFPRRTIDVRAREIGSLMVEGMMEDA 447          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.020e-79
Identity = 131/276 (47.46%), Postives = 180/276 (65.22%), Query Frame = 1
Query:  334 YALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLS-PFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATM 1158
            Y +K    + I    +  P    +++ V Y  Y   F D  K  FL +++P+L A++R+ ++  RS SV+ W + +L   E++S YL++P++STLAFGG GGLA+GL+ +DV +NF GG++LL  EPF PGDMVTF+ G     GRVERVGW QTR+RGRDTRPTYVPN  F  T VTNM+RITHRKFE+   LRY D   +++++  IK  L+ +P +D ++ PFR   V      L I V CYF+TKS DEFL LQQ A LE+ + V   NA++
Sbjct:    5 YLIKLLNLLFILMNLSVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAANFLGGILLLFNEPFTPGDMVTFRSGNTELLGRVERVGWGQTRIRGRDTRPTYVPNSHFVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASL 280          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 2.790e-77
Identity = 129/165 (78.18%), Postives = 133/165 (80.61%), Query Frame = 1
Query:  475 VWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGK-------------------------------DVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMD 876
            +WIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGK                               DVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMV++ +
Sbjct:    1 MWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKEALFVACVGIHGPRSPPLRSSLAVVCSVAKKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVSSRE 165          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA)

HSP 1 Score: 249 bits (637), Expect = 7.000e-71
Identity = 131/258 (50.78%), Postives = 165/258 (63.95%), Query Frame = 1
Query:  181 IVYRRLLRVLYRLQVQVWRLVRKHDP-------QPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKR----------------FFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRIT 885
            +VY++ LRV+Y LQ +  R +            +P+EQS LGF+EPRLR L+R +   Y     +  L   G+   P     +S VV   YAGYF+DE KR                F+LPV  P L+ D RK FIYNR+ SVLTW++  L + +VISA+L IP+ ST+AFGG GG+A G A K +  NFFGGL LLL+EPF+PGDMV F+ GG   EGRVERVGWYQTRLRGRDTRPTY+PN +F   +VTNMDRI+
Sbjct:  222 LVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSWLGFLEPRLRSLTRVMAGLYVANGALGGLANLGYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFENFFGGLTLLLSEPFVPGDMVHFEYGGEVMEGRVERVGWYQTRLRGRDTRPTYIPNNVFLSNLVTNMDRIS 479          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A2U2AKE7_9GAMM (Mechanosensitive ion channel protein MscS n=2 Tax=Ignatzschineria TaxID=112008 RepID=A0A2U2AKE7_9GAMM)

HSP 1 Score: 156 bits (394), Expect = 2.770e-39
Identity = 93/253 (36.76%), Postives = 135/253 (53.36%), Query Frame = 1
Query:  496 ADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQ--GAN-ATMTSVLYVDMNNPAPIGKVSLAGMINSAQNK 1245
            ADK    I  R L ++ + I LL   E    +  + ++  + FGGIGG+AIG A KDVLSNFF G+ML    PF  GD +       + EG V+ +GW  T++   D RP Y+PN +FS   V N  R+T+R+  +   LRY D+ KVA ++  I+  L+  P IDL     V+  DF +S L I + C+  T  + E+L  QQ   L++  +V   GA+ A  T +LY+D N  A   ++     I  A N+
Sbjct:  124 ADKTSAKIITRVLKIVIFLIVLLLFGE----HFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDSDKVAAVVNDIRTMLQQNPKIDLTQTLLVYFNDFGDSSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLDNNEGALQVQIKEDPAITPAMNR 370          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A2U2AKG0_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Ignatzschineria indica TaxID=472583 RepID=A0A2U2AKG0_9GAMM)

HSP 1 Score: 152 bits (383), Expect = 1.370e-38
Identity = 90/236 (38.14%), Postives = 126/236 (53.39%), Query Frame = 1
Query:  496 ADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQ--GAN-ATMTSVLYVDMNNPA 1194
            ADK    I  R L +  + I LL   E    +  + ++  + FGGIGG+AIG A KDVLSNFF G+ML    PF  GD +       + EG V+ +GW  T++   D RP Y+PN +FS   V N  R+T+R+  +   LRY DA KV  ++  I+  L+  P IDL     V+   F ES L I + C+  T  + E+L  QQ   L++  +V   GA+ A  T +LY+D N  A
Sbjct:   48 ADKTSAKIITRVLKIAIFLIVLLLFGE----HFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDADKVNAVVNDIRTMLQQNPKIDLTQTLLVYFNAFGESSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLDNNEGA 277          
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A316FRM7_9GAMM (MscS family membrane protein n=1 Tax=Pleionea mediterranea TaxID=523701 RepID=A0A316FRM7_9GAMM)

HSP 1 Score: 152 bits (385), Expect = 4.030e-38
Identity = 109/362 (30.11%), Postives = 182/362 (50.28%), Query Frame = 1
Query:  229 VWRLVRKHDPQPYEQSVLGFVEPRLRMLSR-------TLVVAYALKSG-------VRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATM---TSVLYVDMNNPAPIGKVSLAGMINSAQNKGVAQSG 1263
            +WR V     +  EQS   + +   + LS         L + +A+++        +  +   G   + Q++ V+   ++ W+   F++E++R  +    PS + + +       ++S L     ++TV  VI   + + I++ LAFGGIGG+AIG A KD+LSNFFGGLM+ +  PF  GD V      +  EG VE++GW QTR+R  D RP YVPN +F++  V N  R+THR+   +  +RY D   +  I + +K+ L++   ID       +   F+ S +   V  Y     + +F  L+Q  LL+V  +++   A +   TS L+V+M NP       LAG+ +S  +   +  G
Sbjct:   34 IWRRVHIRLSKKVEQSNTFWDDALFKALSSPVTWAIWVLGIGFAIETSQSDYLIELLTIDLKGEAKSVQVSNVILIGLFGWFLNRFINESERQIIDKQ-PSKERNDQIDQTTIEAISKLLRVSVMITVVLVILQTIGVSISAVLAFGGIGGIAIGFAAKDLLSNFFGGLMIYMDRPFAVGDWVRSPDRDI--EGVVEKIGWRQTRIRTFDKRPLYVPNAVFNNIAVQNPSRMTHRRIFETVGIRYDDVGVMKPITEKVKSMLQEHDKIDQNQALITNFNAFSSSSVDFFVYAYTHITDWIKFHELKQEILLKVAEIIEQEGAEIAFPTSTLHVNMKNP------QLAGLESSTSDNNESSGG 386          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R0_ECTSI0.000e+094.32Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A4D9D8J2_9STRA5.070e-11446.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA2.000e-11146.00Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A6U0TNP3_9STRA1.860e-10245.22Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0SR49_9STRA1.020e-7947.46Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5L1M0_9PHAE2.790e-7778.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZID6_9STRA7.000e-7150.78Mechanosensitive ion channel-domain-containing pro... [more]
A0A2U2AKE7_9GAMM2.770e-3936.76Mechanosensitive ion channel protein MscS n=2 Tax=... [more]
A0A2U2AKG0_9GAMM1.370e-3838.14Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A316FRM7_9GAMM4.030e-3830.11MscS family membrane protein n=1 Tax=Pleionea medi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig666contigEcto-sp13_S_contig666:6581..11109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score149.1
Seed ortholog evalue5.4e-33
Seed eggNOG ortholog1440052.EAKF1_ch0102
Preferred nameynaI
Model size1428
KEGG koko:K16052
KEGG TC1.A.23.4
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944
Exons10
EggNOG free text desc.Belongs to the MscS (TC 1.A.23) family
EggNOG OGs1MXD2@1224,1RNUB@1236,3XNAZ@561,COG0668@1,COG0668@2
Ec32 ortholog descriptionSmall Conductance Mechanosensitive Ion channel
Ec32 orthologEc-22_002670.1
Cds size1428
COG Functional cat.M
Best tax levelEscherichia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig666.17531.1prot_Ecto-sp13_S_contig666.17531.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig666 6581..11109 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463916.6349943-CDS-Ecto-sp13_S_contig666:6580..70911681463916.6349943-CDS-Ecto-sp13_S_contig666:6580..7091Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 6581..7091 -
1681463916.6523619-CDS-Ecto-sp13_S_contig666:7280..73361681463916.6523619-CDS-Ecto-sp13_S_contig666:7280..7336Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 7281..7336 -
1681463916.663754-CDS-Ecto-sp13_S_contig666:7783..78861681463916.663754-CDS-Ecto-sp13_S_contig666:7783..7886Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 7784..7886 -
1681463916.675048-CDS-Ecto-sp13_S_contig666:8188..82831681463916.675048-CDS-Ecto-sp13_S_contig666:8188..8283Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 8189..8283 -
1681463916.6864336-CDS-Ecto-sp13_S_contig666:8513..86971681463916.6864336-CDS-Ecto-sp13_S_contig666:8513..8697Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 8514..8697 -
1681463916.6987035-CDS-Ecto-sp13_S_contig666:9040..91171681463916.6987035-CDS-Ecto-sp13_S_contig666:9040..9117Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 9041..9117 -
1681463916.7095835-CDS-Ecto-sp13_S_contig666:9652..97361681463916.7095835-CDS-Ecto-sp13_S_contig666:9652..9736Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 9653..9736 -
1681463916.7219214-CDS-Ecto-sp13_S_contig666:10158..103221681463916.7219214-CDS-Ecto-sp13_S_contig666:10158..10322Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 10159..10322 -
1681463916.7331831-CDS-Ecto-sp13_S_contig666:10657..107721681463916.7331831-CDS-Ecto-sp13_S_contig666:10657..10772Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 10658..10772 -
1681463916.7423928-CDS-Ecto-sp13_S_contig666:11070..111091681463916.7423928-CDS-Ecto-sp13_S_contig666:11070..11109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 11071..11109 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig666.17531.1

>prot_Ecto-sp13_S_contig666.17531.1 ID=prot_Ecto-sp13_S_contig666.17531.1|Name=mRNA_Ecto-sp13_S_contig666.17531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=476bp
MLRRGSAPAQLWSIAGLKAAGAKFWGPLTNVVTPQKLFLFLLFQARPLTP
AFPRFASLSQIVYRRLLRVLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPR
LRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVD
EAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRI
PITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRG
GVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFE
SSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKI
NVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMTSVLYVDMNNPAPI
GKVSLAGMINSAQNKGVAQSGLPKAVASPKDLNPKGAEGAAKEEDDPRPI
NGTGVSGGSSVQKSRRVKKPRGGTV*
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mRNA from alignment at Ecto-sp13_S_contig666:6581..11109-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig666.17531.1 ID=mRNA_Ecto-sp13_S_contig666.17531.1|Name=mRNA_Ecto-sp13_S_contig666.17531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4529bp|location=Sequence derived from alignment at Ecto-sp13_S_contig666:6581..11109- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCCGACGAGGGTCCGCTCCTGCACAGTTGTGGTCGGTGAGAACTCA AAGAAACGATTGTCGAAACGATATGTGCGGTCGAACTGTTTGCTACACAG TTGTTACACAGCTCACGATGTGGTGAATAACACGACCCATGGACGTCGGC ATGCAAGCAGATCTGCACGCACAGACTGCAACAGCAACAACAGGGGTCCC GCGCCATATTCATCGTGATGCATGTCTGGCCCATGTCACCAGCTCTCGGT TCGCGATGGCTAACTGAACTCTGATGTATGTGATGTTGCGTTATCTCTAG ACCCCCCTCTTGTCTTTGTCGTGGCGACTCCCATCAGATCGCAGGACTCA AAGCAGCCGGCGCGAAATTCTGGGGGCCGCTGACAAATGTCGTCACACCC CAGAAGCTTTTCCTCTTCCTGCTGTTTCAGGCGAGACCTCTGACACCTGC ATGTATTGATGCTCTATCTCAGCAATACTTCATTTAGTCGATTTATTCCT TTGCTCAGTAGTGATGTTTGCTTTGCACTCACGACACCCCGAACGTTTCT CACGAAAAAGAACGTCTATTGAAACTGAAGACATGCCTTCGATTGAGGCA TTTTCTCGAACGGGTATTTCTGTTGTTGCATGCATTATCATACCTGCGAA AAGAACACCGCGCGTTTCGCAAACGCAGGGCCTCAACGTAGGATGCAAAC GACAATCGCATGTGCCCTTGTACGAAATATCTCACTTCGGAGTAGTACCC TCGCGCGTCCCTCATCTTCTCTCAAATGATCCCTAAGTTCCCCGCTTTGC CTCCCTTTCGCAGATTGTGTACAGAAGGTTGCTCCGAGTACTGTACAGAC TGCAGGTGCAGGTGTGGCGACTCGTGCGAAAACACGACCCCCAACCTTAC GAGCAATCTGTTCTGGGCTTTGTGGAGCCCAGATTGAGAATGCTCAGCAG GGTGAGCCGTTTGTTGCTTGGGTTGACGTGTCTCGCGTGTGACTGCGTGA CTGCAGTTGCCTGGTTTCAGGCTTTGGTGTATATCCAACTCCGCATCACC TTTGTTGGCGTGGATTAGTGCAGCACTGCTAGTAAGGCTAGATTTGCTAT TGCAGAAGACGACGTCATGCACCGTCGTCTCGTTTCAACATGTGCCTGTG TGATGCACCTCGTATGTTTTGGTGCCTTTTTAGAGCACAACTGTACGGTT GACCTTTATGTATTCGTTTCACTGCAAAGTGTTGCAAATGTGGAAGAGAG AGGGTGCGGCGTTTCCGGAGAGTGCCATTTCATGGTCAAGCGAAATTGCT TGTGGACATGCCACCTCCACTCTACAAGATGTTATCCCTCCACTGCTTCA CGCCCCACATGCACAACGGTCAGACTTTAGTGGTGGCATACGCGTTGAAG AGCGGCGTCAGGGTGCTGATTGCGAGCGGATGGAACGCCAACCCCCAGCT GGCAAAGGTGGGCATGGACATCGTAGATGAGACTCTAGACGGCAGTCTAT AGACTCTTGACTGCTTGCGTCTCGTCGTTCCTTCCCATCTGCGTCTATGT ATGTATCTGCCTGGCTTCATGAGCATGACATCGTGTGCGTACCTTCTTGG CGAAGCTTTGGATGCTCTGTTTCTCCAAGTTTCTACGCTGCTGCGACAAT TCTTCCCATTTCAGTCAATCTGCTGCATATACGAAACATCGTTTCTTGTC CCAAAATAAGTTCGACTTTCAGCTCGGACTCGGCATGCTGGAGCAGTTAA GTTACGGTGGAGCATGCGCCCTTGTGACGCTTGTGCATGATAGTGCAAGA TTAGTGAACCGGTGCCATCTGTGTCACTTTTTTCTAGTACAAAGTACACG TAGCATCTGAGCTGTGCGCCGCAATTGACGAAGGTGTGCCCTCTCTCAGC CGCCCGAAGTTCCGACAGGCGAAATCGACAAAGCTTAAAATCGTGAGAAC CGCGTGACTGTTGCTTTTTCCCGGCCATACCTTTTCCGACAGGTTCTATC CGATGTGGTGTACTGCTGGTATGCAGGCTATTTTGTGGACGAGGCGAAGC GTTTCTTTCTCCCTGTCTGGTACGTGGGAATGAGGCTTGATGTATGTCAC CGACTCTGAAAGATTGGGGCACTGTGCACCAAATTGTTGGGCATGTGATT GCCTGTCGAACTATGCGGGTGCAGATTGCTACCGGGCTCGTGTTTGATAT CCCTTTTTATCAATGGTAGAGCTGCGGCACTCTAGGAGATAGCGCAGAAG CAGATCCACCACATTTCCTTGCTTTTGCCCGACCCTGACCACCGTCCGTG GGTAGCCCACACATCATGGCACCTATGAAACGGCGCTGTCTCGACTTCTC AAACACCGGCACGATCTGAACTAGCTGCCCTACGTTGCGTCTGCTCTAAC TCTACATGACAGGATACCTTCACTAAAGGCTGACAAGCGAAAAGGCTTCA TTTACAACCGATCCTTATCGGTGCTTACATGGTCTATTTGTCTTCTCACC GTATCGGAGGTGATCTCGGCGTATCTCCGAATACCAATTACCTCCACGCT GGCTTTCGGGGGTATCGGTGGTCTCGCCATTGGTTTGGCCGGGAAGGTGA GGCGGTGTCATGCCTTATGTGTAGCGACTGAGGCATGCCGTTGTGCATGG TCGCATTCGCCGTGTTCCTGGTGGTTGTTGTATTTGGTAAATGCTGGGTT AGGTCGATTCTGTGGCGAACCCCTGCATAGTAGAAGGCCTTGTTCGTTGC TTGTGTTGGTATTCACGGCCCCCGGTCGCCTCCTCTCCGCTTGTCTCTTG CTGTTGTCGGTTCGGTGGCGAGAAAGGATGTTCTCTCCAACTTTTTCGGG GGCCTGATGCTCCTTCTCGCCGAGCCTTTCATTCCAGGAGATATGGTGAC GTTCCAGAGAGGCGGAGTAAGGTGACGGAGATGACTAGGTTTTGGTTTGT ATGATTGTCATCGATGTACATAGTTAGCCTTTTTTTACACAGGAGGTGGA GCTGCCCGTCCTGCCAGTAAAGAGTTGAAGTTCTCTCTTGCATGTATCTA CATTAGGAATTTTTGGTTTCTCTGTTTTGGCACCAAGGCTTACGTTGCGA CTCACGAACACTACACAAGAGAGGATACGCAAGCAGGTTGCCTGTACACA GAAGGGGATGCATTGGTCGCCTACAATTCCACATCCATGCTCCTACCTCG TGTATGCCGTCTTGTGGCGGCAGATGCGAAGGGCGTGTAGAGCGTGTGGG CTGGTACCAAACAAGGTTACGTGGGAGGGATACTCGTCCTACATACGTGC CTAACGGGATGTTTTCCGACACAATGGTGAGCTCCAGGGAGATTTGAGTT TTTTCTTTGCCGTAGGTGTCCCGCCTCCGGCGTACGTATTCGGCGTGCTC CGCGCTGATTTGTCACCATTGCGGTTCGGCTGAAATGGATGCCCCAGTTC CTCAGCTGAGTGGAAGTTCTCAGTCTCTTTGTAGGACACAAAGGCTCCGT ATGTGGACAAATTCGGTATACGAATATCTACGGGATGCACATGTGTCAGG TTTGATCGCTTGGGGATCGGTTTCTTGCAGTGCTCCGGTTGGAGTCATGC TAGACACCAACAGGGCTTGTTCTCCATCTGAGTTGGTGTGGAACGTGCCC CGTTTGTGGAGCGGAGGATGCCCACAATTCGGACACTCACGCAAACTTTG TTTCCGCGGGCGTTTACCCACATTTCCAGTCCTTTTTGCTTGTTGGTCTT CTCAATACTCACCACTGCAACAGGTGACCAACATGGATCGAATAACTCAT CGAAAGTTCGAATCCAGTTTCCAACTCCGGTGAGCCAAGAAACTTCACAA CATCAGCAGCGGTAGTATGCAGCGGTTTGAACTCGTTTGTTTTGCGTGTC CTCTCATCTCGTTGTAGGTCTTGAGCGTCTCCCAGTTGACCTTTCTCCCT TGTGCAAGTCTACAGCGAGGGAACCTTATCTGAAATCTGATGTTCCCCTT GTGCGCTTCTCTGGACAGGTACGCCGATGCGCCGAAGGTGGCAGAGATTT TGCAGGGGATCAAAGCTGCCCTCAAGGATGTCCCCAACATTGATTTACTC AGCCCGTTCCGCGTCCATTTGGTCGATTTTGCGGAAAGTGGCCTGAAGAT CAACGTAGTGTGCTACTTTGCCACGAAATCGTTTGACGAGTTCTTGTACT TGCAACAAGTAGCGCTCCTCGAGGTAACTCGCGTAGTTCAAGGCGCGAAT GCTACTATGACGAGCGTCTTGTATGTCGACATGAACAACCCTGCCCCGAT TGGGAAAGTGTCTTTAGCAGGAATGATCAACTCTGCCCAAAACAAGGGCG TGGCTCAGTCGGGATTGCCCAAAGCGGTGGCTTCACCAAAGGATTTGAAT CCAAAAGGCGCCGAGGGCGCAGCAAAAGAGGAAGACGACCCGCGGCCAAT AAACGGTACTGGTGTTAGCGGCGGTAGCAGTGTACAAAAAAGTAGACGTG TAAAGAAGCCCCGGGGTGGTACTGTATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig666:6581..11109-

>mRNA_Ecto-sp13_S_contig666.17531.1 ID=mRNA_Ecto-sp13_S_contig666.17531.1|Name=mRNA_Ecto-sp13_S_contig666.17531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp13_S_contig666:6581..11109- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCCGACGAGGGTCCGCTCCTGCACAGTTGTGGTCGATCGCAGGACT
CAAAGCAGCCGGCGCGAAATTCTGGGGGCCGCTGACAAATGTCGTCACAC
CCCAGAAGCTTTTCCTCTTCCTGCTGTTTCAGGCGAGACCTCTGACACCT
GCATTTCCCCGCTTTGCCTCCCTTTCGCAGATTGTGTACAGAAGGTTGCT
CCGAGTACTGTACAGACTGCAGGTGCAGGTGTGGCGACTCGTGCGAAAAC
ACGACCCCCAACCTTACGAGCAATCTGTTCTGGGCTTTGTGGAGCCCAGA
TTGAGAATGCTCAGCAGGACTTTAGTGGTGGCATACGCGTTGAAGAGCGG
CGTCAGGGTGCTGATTGCGAGCGGATGGAACGCCAACCCCCAGCTGGCAA
AGGTTCTATCCGATGTGGTGTACTGCTGGTATGCAGGCTATTTTGTGGAC
GAGGCGAAGCGTTTCTTTCTCCCTGTCTGGATACCTTCACTAAAGGCTGA
CAAGCGAAAAGGCTTCATTTACAACCGATCCTTATCGGTGCTTACATGGT
CTATTTGTCTTCTCACCGTATCGGAGGTGATCTCGGCGTATCTCCGAATA
CCAATTACCTCCACGCTGGCTTTCGGGGGTATCGGTGGTCTCGCCATTGG
TTTGGCCGGGAAGGATGTTCTCTCCAACTTTTTCGGGGGCCTGATGCTCC
TTCTCGCCGAGCCTTTCATTCCAGGAGATATGGTGACGTTCCAGAGAGGC
GGAGTAAGATGCGAAGGGCGTGTAGAGCGTGTGGGCTGGTACCAAACAAG
GTTACGTGGGAGGGATACTCGTCCTACATACGTGCCTAACGGGATGTTTT
CCGACACAATGGTGACCAACATGGATCGAATAACTCATCGAAAGTTCGAA
TCCAGTTTCCAACTCCGGTACGCCGATGCGCCGAAGGTGGCAGAGATTTT
GCAGGGGATCAAAGCTGCCCTCAAGGATGTCCCCAACATTGATTTACTCA
GCCCGTTCCGCGTCCATTTGGTCGATTTTGCGGAAAGTGGCCTGAAGATC
AACGTAGTGTGCTACTTTGCCACGAAATCGTTTGACGAGTTCTTGTACTT
GCAACAAGTAGCGCTCCTCGAGGTAACTCGCGTAGTTCAAGGCGCGAATG
CTACTATGACGAGCGTCTTGTATGTCGACATGAACAACCCTGCCCCGATT
GGGAAAGTGTCTTTAGCAGGAATGATCAACTCTGCCCAAAACAAGGGCGT
GGCTCAGTCGGGATTGCCCAAAGCGGTGGCTTCACCAAAGGATTTGAATC
CAAAAGGCGCCGAGGGCGCAGCAAAAGAGGAAGACGACCCGCGGCCAATA
AACGGTACTGGTGTTAGCGGCGGTAGCAGTGTACAAAAAAGTAGACGTGT
AAAGAAGCCCCGGGGTGGTACTGTATAA
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