mRNA_Ecto-sp13_S_contig6641.17499.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6641.17499.1
Unique NamemRNA_Ecto-sp13_S_contig6641.17499.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A6H5L8Y3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Y3_9PHAE)

HSP 1 Score: 1387 bits (3591), Expect = 0.000e+0
Identity = 723/790 (91.52%), Postives = 746/790 (94.43%), Query Frame = 2
Query:    2 DTHEKLREATRNGAKRKARVLSKHHAVLARWTASPLTGVNPRRQQHNGANGCSTSDSPAAPRYPGTRSSEDIPPVDAVAHLSEEVRVQNDIVSPLLSLASTDSVGRHVVAGGGSGAGAIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEITGPVSLCPACGRVAFCGRACSTAALQEWHGSECLDASSCTPLEPALSGISPTCMVALRAYKRARRQGGQLPKRTDSGKGDTGVAVTVTEMQGACQNRFGSVTSSPPRGGGENVKWPKVKLGNLQEHYVARSARERDLLETEAAVTAVLASGFGSGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIACYPPPEETATTPSRRSRVSEGDDERQLTDRDKEGRAIEATFSKRTDFACTEAESGGCPGTLRVGVSPXXXXXXXXXXXXXTTQGCINSGVESSNVPSPCINRVQAVASPSSTSPTPRRIEVVVLWCDHCGSRVPPDLADALLKEDKEDRRLWEEAKVAMSSSDKGAERSGGGDDGELKSMPPPTRSRPNTGERSCISSTTEDGSVNAGPFPGSSASSDALSLVVERIRWRDLYLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRRYSPEDRELGIEFLKLAELCFNAGWTDKCTAACVKARESLGICLQPGDEQLEALNTLQALCAAVYRR 2371
            DTHEKLREATRNGAKRKARVLSKHHAVLARWTASP TGVNPRRQQHNGANGCST DSPAAPRY GTRSSEDIP VDAVA  SEEVRVQN+IVSPLLSLASTDSVGRHVVAGGGSGAG IPAGTVLLRETPFAWSLHPEFNGEFCAHCLCE+ GPV+LCP C RVAFCGR CSTAALQEWHGSEC+DASSCTPLEPALSG+SPTCMVALRAYKRARRQGGQLPKRTDSG+GD GVAVTVTE QGACQNRFG++ SSPPRGGGE+V WPKVKLGNLQEHY ARSARERDLLETEAAVTAVLA+GFGS  DLDADSLG SGSGRCATRTSTEACELVAAELATTLVKVSTNAFT+SSLRCSD RAGHN+RPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIE GEPVTISYGPLASK+SS SERQAYLSR YFFRCECIAC+P  EETATTPSRRSR SEG DERQLTDRDKEG+AIEATFSKRTDFACTEAESGGCPGTL VGV PXXXXXXXXXXXX TTQGCINSGVESSNVPSPCINRVQAVAS SSTSP+PRR+EVVVLWCD CGSRVPPDLADALLKEDKEDRRLWEEAK AMSSS+KGA RSGG DDGELKSM PP RSRPNTGER C SSTTEDGSVNA P PGS ASSDALSLV+ERIRWRD YLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRR+SPED+ELGIEFLKLAELCFNAGWTDKCTAACVKA+ESLG+CLQPGDEQLEALNTLQALCAAVY R
Sbjct:   27 DTHEKLREATRNGAKRKARVLSKHHAVLARWTASPATGVNPRRQQHNGANGCSTGDSPAAPRYSGTRSSEDIPHVDAVADRSEEVRVQNNIVSPLLSLASTDSVGRHVVAGGGSGAGVIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEVRGPVTLCPECRRVAFCGRGCSTAALQEWHGSECVDASSCTPLEPALSGVSPTCMVALRAYKRARRQGGQLPKRTDSGQGDAGVAVTVTETQGACQNRFGNIASSPPRGGGEDVAWPKVKLGNLQEHYAARSARERDLLETEAAVTAVLANGFGSDIDLDADSLGRSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTISSLRCSDSRAGHNVRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIERGEPVTISYGPLASKMSSTSERQAYLSRAYFFRCECIACHPLSEETATTPSRRSRGSEGGDERQLTDRDKEGKAIEATFSKRTDFACTEAESGGCPGTLCVGVPPXXXXXXXXXXXXSTTQGCINSGVESSNVPSPCINRVQAVASTSSTSPSPRRMEVVVLWCDRCGSRVPPDLADALLKEDKEDRRLWEEAKAAMSSSEKGAGRSGGDDDGELKSMSPPRRSRPNTGERWCKSSTTEDGSVNAAPSPGSFASSDALSLVMERIRWRDRYLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRRFSPEDQELGIEFLKLAELCFNAGWTDKCTAACVKAKESLGVCLQPGDEQLEALNTLQALCAAVYHR 816          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: D7FV15_ECTSI (Set and mynd domain containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV15_ECTSI)

HSP 1 Score: 978 bits (2529), Expect = 0.000e+0
Identity = 523/586 (89.25%), Postives = 538/586 (91.81%), Query Frame = 2
Query:  614 MVALRAYKRARRQGGQLPKRTDSGKGDTGVAVTVTEMQGACQNRFGSVTSSPPRGGGENVKWPKVKLGNLQEHYVARSARERDLLETEAAVTAVLASGFGSGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIACYPPPEETATTPSRRSRVSEGDDERQLTDRDKEGRAIEATFSKRTDFACTEAESGGCPGTLRVGVSPXXXXXXXXXXXXXTTQGCINSGVESSNVPSPCINRVQAVASPSSTSPTPRRIEVVVLWCDHCGSRVPPDLADALLKEDKEDRRLWEEAKVAMSSSDKGAERSGGGDDGELKSMPPPTRSRPNTGERSCISSTTEDGSVNAGPFPGSSASSDALSLVVERIRWRDLYLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRRYSPEDRELGIEFLKLAELCFNAGWTDKCTAACVKARESLGICLQPGDEQLEALNTLQALCAAVYRR 2371
            MVALRAYKRARRQGG LPKRT SGKG   VAVTVTE +GAC +RFGSV SSPPRGGG++V WP VKLGNLQEHY ARSARERDLLETEAAVTAVLASGFGSGTDL             ATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDP AGHN+RPLKHATVAVGLYLVASM+NHSCRPNALASFHGGEMRVVATRAIE GEPVTISYGPLASKISSASERQAYLSR YFFRCECIAC+PPPEETATTPS RSR SEG DERQLTDR+KEGRA EATFSKRTDFACTEAESG CPGTLRVGVSPXXXXXXXXXXXX TTQGC+ SG ESSNVPSPC NRVQAVAS SSTSP+PRR+EVVVLWCD CGSRVPPDLADALLKEDKEDRRLWEEAK AMSSS+K A R GGGDDGELKSMPPP RSRPNTGERSC SSTTEDGSVNA PFPGSSASSD LSLVVERIRWRD YLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRR+SPED+ELGIEFLKLAELCFNAGWTDKCTAACVKARESLG+CLQPGDEQLEALNTLQALCAAVY R
Sbjct:    1 MVALRAYKRARRQGGPLPKRTGSGKGGADVAVTVTETRGACHDRFGSVASSPPRGGGDDVAWPNVKLGNLQEHYAARSARERDLLETEAAVTAVLASGFGSGTDLXXXXXXXXXXXXXATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPPAGHNVRPLKHATVAVGLYLVASMMNHSCRPNALASFHGGEMRVVATRAIERGEPVTISYGPLASKISSASERQAYLSRAYFFRCECIACHPPPEETATTPSGRSRGSEGGDERQLTDREKEGRATEATFSKRTDFACTEAESGACPGTLRVGVSPXXXXXXXXXXXXSTTQGCLISGAESSNVPSPCFNRVQAVASLSSTSPSPRRMEVVVLWCDRCGSRVPPDLADALLKEDKEDRRLWEEAKAAMSSSEKEAGRCGGGDDGELKSMPPPRRSRPNTGERSCKSSTTEDGSVNAAPFPGSSASSDTLSLVVERIRWRDRYLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRRFSPEDQELGIEFLKLAELCFNAGWTDKCTAACVKARESLGVCLQPGDEQLEALNTLQALCAAVYHR 586          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A6J1TBV3_FRAOC (SET and MYND domain-containing protein 4 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TBV3_FRAOC)

HSP 1 Score: 104 bits (259), Expect = 2.420e-19
Identity = 106/351 (30.20%), Postives = 143/351 (40.74%), Query Frame = 2
Query:  314 GRHVVAGGGSGAGAIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEITGPVSLCPACGRVAFCGRACSTAALQEWHGSEC-LDASSCTPLEPALSG-ISPTCMVALRAYKRARRQGGQLPKRTDSGKGDTGVAVTVTEMQGACQNRFGSVTSSPPRGGGENVKWPKVKLGNLQEHYVARSARERDLLE---TEAAVTAVLASGFGSGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIAC 1351
            GRH+VA     A  IPAG+ ++ E P+AWSL  E     C HC   +  P+  CP C  VAFCG  C  AAL  +H  EC L      P      G ++P  ++A R   RA R G             TG      E     +    +      R  G ++         +  H  AR+    DLL+   T A +T  L +    G  L  D                   +L+ A     L   S NA+ VS  RC    AG  +R  +   +    Y   S++NH+C PN     HG    V A R I  G  V  +YGP   ++ +  ER+A LS+ Y F C+C AC
Sbjct:  282 GRHLVA-----AQNIPAGSAIIVERPYAWSLALEEMATHCLHCCSPVLAPLP-CPLCSNVAFCGEDCRRAALSSYHRLECPLLRQLVAPQGQGGGGDLTPMALLAFRIVARAARLGEV-----------TGGPRLPQEFVDLYRRDEDAGKKKRRRNKGGHLDGYGPVFAQVT-HSEARTPA--DLLKRAVTSAYLTCCLEAVLPDGV-LPEDE-----------------AQLLTAAFLRHLQSCSCNAYQVSEHRCGG--AG-GVRASRGVELGGACYPTVSLVNHACHPNVARHSHGSVCVVRAVRLIPEGSEVLDNYGPHFLELET-EERRAALSKQYMFHCDCDAC 590          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A6P9A4N2_THRPL (SET and MYND domain-containing protein 4-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9A4N2_THRPL)

HSP 1 Score: 101 bits (252), Expect = 1.680e-18
Identity = 104/379 (27.44%), Postives = 146/379 (38.52%), Query Frame = 2
Query:  314 GRHVVAGGGSGAGAIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEITGPVSLCPACGRVAFCGRACSTAALQEWHGSECLDASSCTPLEPALSGISPTCMVALRAYKRARRQGGQLPKRTDS----------------GKGDTGVAVTVTEMQGACQNRFGSVTSSPPRGGGENVKWPKVKLGNLQEHYVARSARERDLLETEAAVTAVLASGFGSGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIAC---YPPPEETATTPSRR 1393
            GRH+VA        IPAG+ ++ ETPFAWSL  E     C HC   +   V  C  C    FCGRAC  AAL  +H +EC       P  P    +SP  ++A R   +A     Q+  RTD+                G+G         + +      F  VT S  R   + +K               RS     L     AV  V  +  G   D                    E   ++ A     L   S NA+ +S  R     AG ++R  +   +    Y   S++NH+C PN     HG    V  TRA+  G  +  +YGP   +     ER+A L + Y F+C C+AC   +P  E+    P ++
Sbjct:  261 GRHLVA-----TQHIPAGSAVIAETPFAWSLSLEETPTHCLHCCAPVLASVP-CAFCSDAVFCGRACRDAALPAYHLAECGMLGQLVPPRPDAE-LSPMALLAYRIVVQAAGLAAQVAARTDAVVLPRAFVELHQDHQDGEGRKKKGRRRKKEEDGYDAVFAQVTHSDRRTPADLLK---------------RSLTAAFLTCCLEAVLQVRLAPRGEVLDXXXXXXXXE-----------EQRVVLTAAFLRHLQGCSCNAYQISEHRL----AGGSVRAARGVELGGACYPTVSLVNHACSPNVARHSHGNVCVVRTTRAVAKGAELLDNYGPHFLE-HDLEERRAALEKQYMFQCACVACANDWPSLEDLEPHPQQK 601          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A835YRX0_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX0_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.180e-13
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2
Query: 1043 NAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIAC 1351
            N+FT+S++      A      ++H  + V +YL  + +NHSCRP A   F G  + V AT+AI  G+PVTISYGPLA +      R+A+L R Y F C C+AC
Sbjct:   44 NSFTISAV-ADTTEAASAFVDVEHVKLGVVVYLHGAAMNHSCRPTAAVHFEGTTLVVTATQAIAEGDPVTISYGPLAWR-DPLDRRRAHLLRRYCFVCCCVAC 144          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A1X2HR13_SYNRA (SET and MYND domain-containing protein 4 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HR13_SYNRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.150e-12
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2
Query: 1106 LKHATVAVGLYLVASMINHSCRPNALASFHGGE---MRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIAC 1351
            ++   + V LY VASM NH CRPNA+A F   +   MR+  T  ++ GEP+ +SYGPLA+K +S +ERQ  L + YFF C C +C
Sbjct:  207 IEKKVIGVSLYHVASMFNHDCRPNAVALFDPAQPALMRIRLTDPVKAGEPIHVSYGPLAAK-NSRAERQEQLRQGYFFDCTCHSC 290          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A507DF50_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DF50_9FUNG)

HSP 1 Score: 81.3 bits (199), Expect = 2.170e-12
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 2
Query: 1043 NAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCE-CIAC 1351
            N+F++     SD    + +     A V VG+Y+ AS+INHSC PN++  F G  ++V A + I  G+ VTISYGPLA++  S SERQ Y  +T+ F+C  C  C
Sbjct:  192 NSFSIKHTISSD---SNGIVECTDAKVGVGVYVHASLINHSCTPNSVVEFIGSRIQVRAAQTIAAGDEVTISYGPLAAR-QSKSERQEYFDQTWAFKCHRCTTC 291          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: A0A1X2ILQ5_9FUNG (SET domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2ILQ5_9FUNG)

HSP 1 Score: 80.1 bits (196), Expect = 5.390e-12
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 2
Query: 1058 SSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIACYPPPE 1366
            SS R S+ R    +  +K  TVA  +Y++AS  NHSC+PN LA F G ++++ A R I  G+P+ ISYGPLA+  S   +RQ  L   YFF C C AC   P+
Sbjct:  239 SSRRDSEDRP---VLDVKMDTVATSIYILASKFNHSCQPNVLALFIGTQLQLRAIRPILPGQPLYISYGPLAAN-SPLLKRQEQLLEHYFFECHCQACQVVPD 337          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: UPI001C4899A3 (SET and MYND domain-containing protein 4-like n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C4899A3)

HSP 1 Score: 80.1 bits (196), Expect = 1.010e-11
Identity = 94/386 (24.35%), Postives = 145/386 (37.56%), Query Frame = 2
Query:  233 VAHLSEEVRVQNDIVSPLLS---LASTDSVGRHVVAGGGSGAGAIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEITGPVSLCPACGRVAFCGRACSTAALQEWHGSECLDASSCTPLEPALSGISPTCMVALRAYKRARRQGGQLPKRTDSGKGDTGVAVTVTEMQGACQNRFGSVTSSPPRGGGEN-----VKWPKV--KLGNLQEHYVARSARERDLLETEAAVTAVLASGFGSGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIACYPP 1360
            V H    ++ ++ +V  + S   L   D  GRH+VA        +  G+V+  E P+A  L PE++   C  C    T PV  C  C  V FC   C     Q+WH  EC                                  G L   +  G     V V +      C +    V      G G+N       W +    + +L  H+  +   E  L    AA+  +L +     TD    S     + R       E  E  +A +   + ++ +NA  V+ +  S       +  +    VA  +Y  AS++NHSC+PN + SFH   + +     ++ G+ +   YGP   +  +  ERQ  L R YFF C+C  C  P
Sbjct:  219 VLHDPSIIKGESSVVKYMTSAFELRVNDKYGRHIVASDD-----VSKGSVVFMEKPYAAILLPEYHNSHCHTCFTPATNPVP-CKDCRDVIFCKEECRDLG-QKWHQYEC----------------------------------GILHILSSVGIAHLAVRVILVSGWKLCSDIRDEVIEGRVAGVGKNGVYNGTDWAEGYRAVYHLMPHF-NKCLPEDQLQYCLAAI--LLTNAVYDKTDFRKHSEDVMKNDRL------EIAEFASA-IMRHIAQLVSNAHAVTQIMASSCGEKSKVEQVTQKRVASAIYPTASLMNHSCKPNIINSFHKNMLIIRTVEDVKPGDQIHNCYGPHYCR-QTRGERQESLKRQYFFTCKCAPCTQP 552          
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Match: UPI0005CF4576 (SET and MYND domain-containing protein 4-like n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CF4576)

HSP 1 Score: 78.2 bits (191), Expect = 3.530e-11
Identity = 90/377 (23.87%), Postives = 145/377 (38.46%), Query Frame = 2
Query:  242 LSEEVRVQNDIVSPLLSLASTDSVGRHVVAGGGSGAGAIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEITGPVSLCPACGRVAFCGRACSTAALQEWHGSECLDASSCTPLEPALSGISPTCMVALRAYKRARRQGGQLPKRTDSGKGDTGVAVTVTEMQGACQNRFGSVTSSPPRGGGENVKWPKVKLGNLQEH-------YVARSARERDLLETEAAVTAVLASGFGSGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIAC 1351
            L+ E   +   +S  + +A +   GRH+VA       +   G+++L+E PFA+ ++ E +   C HCL      +S CP C    +C   C T+A +  H  EC       P+   +S +       +R   +  R    L   T +G     +   +   +     R    T+      G + +       NL          +   SA    LL TE+         FG     D            A ++  + C  +        + VS+N+F++             L P     V  GLY+ AS++NHSC PN    F    M   A   I+ G+ +   YG    +  S  ERQ+ + + YFF C+C+AC
Sbjct:  230 LAYETSDEAPALSKGVRIAYSKKYGRHLVA-----TRSFKPGSIILKENPFAYIIYTEKHYTHCHHCLARSYNLIS-CPKCPIAQYCSEICKTSAWKMAHRIEC-------PIHAVMSKLFNVDTDKIRMLTKIIRL---LIIATKNGSAIDELRKDIQVAEQNSDKRTAGFTNDQMMFDGSSARCALSLATNLTTRPFPDISAFACISALATVLLATESEF-------FGKKYAFDELE-------HLAEQSDVKFCGTLVFR---NCLIVSSNSFSIQ------------LEP--GIKVGSGLYVTASLLNHSCAPNTFRHFDSLTMITRALEPIKEGDQIFTCYGG-GYQYMSRPERQSKMMQDYFFNCDCLAC 558          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6641.17499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Y3_9PHAE0.000e+091.52SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FV15_ECTSI0.000e+089.25Set and mynd domain containing protein, putative n... [more]
A0A6J1TBV3_FRAOC2.420e-1930.20SET and MYND domain-containing protein 4 n=1 Tax=F... [more]
A0A6P9A4N2_THRPL1.680e-1827.44SET and MYND domain-containing protein 4-like n=1 ... [more]
A0A835YRX0_9STRA4.180e-1342.72SET domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A1X2HR13_SYNRA2.150e-1247.06SET and MYND domain-containing protein 4 n=1 Tax=S... [more]
A0A507DF50_9FUNG2.170e-1242.31Uncharacterized protein n=2 Tax=Synchytrium endobi... [more]
A0A1X2ILQ5_9FUNG5.390e-1244.66SET domain-containing protein n=1 Tax=Absidia repe... [more]
UPI001C4899A31.010e-1124.35SET and MYND domain-containing protein 4-like n=1 ... [more]
UPI0005CF45763.530e-1123.87SET and MYND domain-containing protein 4-like n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6641contigEcto-sp13_S_contig6641:1787..5636 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score984.6
Seed ortholog evalue2.1e-284
Seed eggNOG ortholog2880.D7FV15
Model size2410
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
Cds size1761
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6641.17499.1prot_Ecto-sp13_S_contig6641.17499.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6641 1823..4819 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463914.023305-UTR-Ecto-sp13_S_contig6641:1786..18221681463914.023305-UTR-Ecto-sp13_S_contig6641:1786..1822Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6641 1787..1822 -
1681463914.0678298-UTR-Ecto-sp13_S_contig6641:4819..49811681463914.0678298-UTR-Ecto-sp13_S_contig6641:4819..4981Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6641 4820..4981 -
1681463914.078333-UTR-Ecto-sp13_S_contig6641:5185..56361681463914.078333-UTR-Ecto-sp13_S_contig6641:5185..5636Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6641 5186..5636 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463914.0360587-CDS-Ecto-sp13_S_contig6641:1822..29171681463914.0360587-CDS-Ecto-sp13_S_contig6641:1822..2917Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6641 1823..2917 -
1681463914.047796-CDS-Ecto-sp13_S_contig6641:3777..40231681463914.047796-CDS-Ecto-sp13_S_contig6641:3777..4023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6641 3778..4023 -
1681463914.0577095-CDS-Ecto-sp13_S_contig6641:4399..48191681463914.0577095-CDS-Ecto-sp13_S_contig6641:4399..4819Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6641 4400..4819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6641.17499.1

>prot_Ecto-sp13_S_contig6641.17499.1 ID=prot_Ecto-sp13_S_contig6641.17499.1|Name=mRNA_Ecto-sp13_S_contig6641.17499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=587bp
MVALRAYKRARRQGGQLPKRTDSGKGDTGVAVTVTEMQGACQNRFGSVTS
SPPRGGGENVKWPKVKLGNLQEHYVARSARERDLLETEAAVTAVLASGFG
SGTDLDADSLGSSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTVSS
LRCSDPRAGHNLRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRV
VATRAIEWGEPVTISYGPLASKISSASERQAYLSRTYFFRCECIACYPPP
EETATTPSRRSRVSEGDDERQLTDRDKEGRAIEATFSKRTDFACTEAESG
GCPGTLRVGVSPPPPPPFAPPTPPPTTQGCINSGVESSNVPSPCINRVQA
VASPSSTSPTPRRIEVVVLWCDHCGSRVPPDLADALLKEDKEDRRLWEEA
KVAMSSSDKGAERSGGGDDGELKSMPPPTRSRPNTGERSCISSTTEDGSV
NAGPFPGSSASSDALSLVVERIRWRDLYLTTTSMRRAVAHDMHARVLASR
EDFPGAADACARAVSVLKRRYSPEDRELGIEFLKLAELCFNAGWTDKCTA
ACVKARESLGICLQPGDEQLEALNTLQALCAAVYRR*
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mRNA from alignment at Ecto-sp13_S_contig6641:1787..5636-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6641.17499.1 ID=mRNA_Ecto-sp13_S_contig6641.17499.1|Name=mRNA_Ecto-sp13_S_contig6641.17499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3850bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6641:1787..5636- (Ectocarpus species13 EcNAP12_S_4_19m)
AGATACACACGAAAAGCTGCGCGAGGCAACACGCAATGGTGCCAAGAGGA AGGCCAGAGTGCTGTCCAAGCATCACGCCGTTTTAGCGCGGTGGACGGCA TCGCCGCTTACGGGTGTCAACCCCCGACGACAACAACACAACGGGGCGAA CGGTTGTAGCACGAGCGATTCTCCTGCTGCGCCGCGCTATCCCGGCACGA GGTCCAGTGAGGATATACCCCCCGTTGACGCGGTGGCCCATCTAAGCGAG GAGGTTCGAGTTCAAAACGACATCGTGTCGCCGCTGTTATCGTTGGCGTC CACGGATAGCGTCGGCCGGCACGTGGTGGCCGGGGGCGGTTCGGGGGCGG GAGCGATACCCGCGGGCACGGTTCTGCTTAGGGAGACCCCGTTTGCATGG AGTCTGCACCCAGAGTTCAATGGTGAATTCTGCGCCCACTGCCTTTGCGA GGTACGGGGTACATGGCACATGCGTATGATGGTTGCCGTTGCGCTAATCC GAAATTACTCATGTGTGGCCTCGAACGCCAATACCCGGCATGTGCGCTTA CGTTTCCCCTTGTGTTCTCGGTACAACGCGCCACGATGTGCTTTCGAGAC GACACGGGCGAGCTGATACGGTACGTACCTTGCCACCCGGCGTACACGTG TTCAGATAACAGGTCCGGTGAGTCTCTGCCCCGCGTGTGGACGTGTAGCT TTTTGCGGCCGCGCGTGCTCAACAGCCGCCCTCCAAGAGTGGCACGGCAG CGAATGCCTAGACGCATCTTCTTGTACTCCCCTCGAACCGGCACTGTCCG GCATATCCCCTACTTGCATGGTGGCACTACGAGCATACAAGCGAGCAAGA CGGCAAGGAGGCCAACTACCAAAGAGAACGGACTCTGGCAAGGGCGACAC GGGTGTCGCCGTTACCGTTACCGAGATGCAAGGTGCATGCCAAAATAGGT TTGGTAGCGTTACGTCGTCGCCGCCCAGGGGTGGTGGCGAAAATGTCAAG TGGCCGAAGGTAAAGCTGGGCAACCTGCAGGAGCACTACGTTGCGCGATC TGCGCGAGAAAGGGACTTGCTGGAGACTGAGGCGGCGGTTACAGCAGTTC TAGCCAGCGGCTTTGGCAGCGGCACAGATTTGGACGCAGACAGCCTTGGA AGCAGCGGTAGCGGACGATGCGCAACCCGAACAAGCACTGAGGCGTGTGA ACTGGTTGCTGCGGAACTAGCCACAACTCTGGTCAAGGTGGGGGGGGGCA GGGTACACTCCGCAGTGATGGGCGCCACTTCGTAGTCGTTTGGTTTGAAA GGAGGTAAATCATCGCCGTTCATGTTTTGTATCATCACTCGGTGTACATC TACACGTGCTCAATATTGCGATGCATCGCCTACAAGTTCGTCCCGTGGCC TGTTGTTGCCCGTGTCGTGTGCATCAAGTCTTACTCTAGTCAGCGTACCA CTCCCGAGGGAAGCATTGTTACAGCTTATGCAACGTTTTTTGCGTTCGGT CTTCCTCCCTGTTAGAACTCGCTTTGGTTCCGCTGCAAAGTGTATACTTG ACCTCAGACGAGCCGATGCCCTCCTCTGATTTGTGTGTAAACACGAAAAA TCACGCCACCCAGGTCAGCACCAACGCCTTCACCGTTTCATCGCTCCGGT GTTCAGACCCACGGGCCGGTCACAACTTGCGACCCTTGAAACACGCAACG GTAGCTGTGGGGCTTTACTTGGTTGCATCGATGATCAACCACTCTTGCCG TCCCAACGCCCTGGCAAGCTTTCATGGGGGAGAGATGAGAGTGGTGGCTA CCCGTGCGATCGAATGGGGGGAACCTGTTACCATTTCCTATGGGCCGCTA GCGTCAAAGGTAGGCAAGCCGGCACGTGTTGCAAGGGTGGCGGACAAATG GTCCGTACTTCTACCGAATGTTATCACTGAAACAGCACGCACGACGACTG CTATCCTCAAGTTGTGTAGCTCAGAGTTGGAGTTTGAGAGAGAGGCATTA AGTTCCCGCAGATAGAGAAACGTGATGGACCGAAAGTCCTTGGCCGGTGG GAGACGTCAACCAGGTCAAAACGTCATTTTTCGGTTCGGGAGATTCCACT GGTGTTCTGGTTTTTTTGCCCGATCGCCGCTCCAGCACTGTACATGACGA GCCAGATGAGCGCTGCCGAGCTTCTCACTTGAGAATTTCGTTTGTGTAAA GCTGTATGCATAGGGATGGTGTTTCGAAGTACAGGTGGTTCTGACCAACT CCTGCTGTGACGCTCGCTGCAAGCGTCCGTCATGATATGTTCTTAATATG CGGATGCAACGTACGAGATATCGCATGCACAGCTTGTGACGTGATCGAAG CGTCGTGGTTTCCCAACGAATTTCTTAACGCGCGCCTTATCAGCACATTC GGAAGTATGGCGTTGAGATTTCCACCGGCGCCCGGTGAACCGTACCGCCG ACTAGGGCACCCTTTGTTGGCCCAACGAAAAGCAGGAACTCTTTCTACTT TTTTTTCTATAATCCGTTTTTTAAACCAATCGATTCGTAGATTTTAGCGA CTATTTCGCGTTGCTTCTTCTTGGCCAGGGTTCCTCTTGTGCGTACCTTC TGCTTTTACCGCGACAGCAGTGGTTCAGCATGTTCCCTCAAGCAAAATAC CGCTCGCGAGGCTACTCCTGATGCCTGATTCTCCAGCTCGTCTGAACTTG CCGCTGACTGCCTCCACAGATATCGTCCGCTTCCGAGCGTCAGGCATACT TGAGCCGGACCTACTTTTTTCGGTGCGAATGCATAGCCTGCTACCCTCCC CCAGAAGAAACCGCCACCACCCCGTCCCGCCGCTCACGCGTCAGCGAGGG CGACGACGAACGGCAACTCACCGATCGAGACAAAGAGGGAAGAGCCATCG AGGCGACGTTTTCGAAACGGACCGATTTCGCTTGTACTGAAGCAGAGAGC GGTGGCTGTCCCGGCACGCTCCGTGTCGGAGTATCTCCTCCTCCACCTCC TCCTTTTGCACCACCCACGCCCCCGCCGACGACCCAGGGTTGCATCAACT CCGGTGTTGAAAGCTCTAATGTTCCAAGCCCCTGTATCAATCGTGTCCAA GCGGTTGCTTCGCCATCGTCGACGTCGCCGACCCCCAGGAGAATTGAGGT GGTGGTGTTGTGGTGTGACCATTGCGGGAGCCGCGTTCCGCCTGACCTGG CGGACGCGCTGCTGAAGGAGGACAAGGAGGACCGCCGGCTGTGGGAGGAG GCAAAGGTGGCGATGTCAAGCTCCGACAAGGGAGCTGAACGTAGTGGAGG TGGCGATGACGGGGAACTGAAAAGCATGCCGCCGCCAACGCGATCCCGTC CGAACACTGGGGAGCGGTCGTGCATATCCTCCACAACGGAGGATGGCTCG GTAAATGCGGGCCCTTTTCCGGGGTCTTCTGCCTCGTCCGATGCGTTGAG TCTTGTCGTGGAACGCATCCGATGGCGCGACCTCTACCTGACTACCACAT CGATGCGGAGAGCCGTCGCACACGACATGCACGCGCGCGTTCTCGCGAGC CGTGAAGACTTTCCCGGCGCCGCCGATGCTTGCGCAAGAGCGGTGAGCGT GTTGAAGCGGAGGTATAGCCCCGAAGACCGGGAGCTGGGCATCGAGTTTC TCAAGCTTGCGGAGCTGTGCTTCAATGCAGGCTGGACGGACAAATGTACC GCAGCTTGTGTGAAGGCTAGGGAGTCGCTCGGGATTTGTCTGCAACCCGG CGATGAGCAGCTGGAAGCGTTGAACACCCTACAGGCTTTGTGCGCGGCGG TCTACCGTCGTTGACCTAGGGCTGATGCTGCTTCTTATTACCGGGTGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6641:1787..5636-

>mRNA_Ecto-sp13_S_contig6641.17499.1 ID=mRNA_Ecto-sp13_S_contig6641.17499.1|Name=mRNA_Ecto-sp13_S_contig6641.17499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1761bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6641:1787..5636- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGCACTACGAGCATACAAGCGAGCAAGACGGCAAGGAGGCCAACT
ACCAAAGAGAACGGACTCTGGCAAGGGCGACACGGGTGTCGCCGTTACCG
TTACCGAGATGCAAGGTGCATGCCAAAATAGGTTTGGTAGCGTTACGTCG
TCGCCGCCCAGGGGTGGTGGCGAAAATGTCAAGTGGCCGAAGGTAAAGCT
GGGCAACCTGCAGGAGCACTACGTTGCGCGATCTGCGCGAGAAAGGGACT
TGCTGGAGACTGAGGCGGCGGTTACAGCAGTTCTAGCCAGCGGCTTTGGC
AGCGGCACAGATTTGGACGCAGACAGCCTTGGAAGCAGCGGTAGCGGACG
ATGCGCAACCCGAACAAGCACTGAGGCGTGTGAACTGGTTGCTGCGGAAC
TAGCCACAACTCTGGTCAAGGTCAGCACCAACGCCTTCACCGTTTCATCG
CTCCGGTGTTCAGACCCACGGGCCGGTCACAACTTGCGACCCTTGAAACA
CGCAACGGTAGCTGTGGGGCTTTACTTGGTTGCATCGATGATCAACCACT
CTTGCCGTCCCAACGCCCTGGCAAGCTTTCATGGGGGAGAGATGAGAGTG
GTGGCTACCCGTGCGATCGAATGGGGGGAACCTGTTACCATTTCCTATGG
GCCGCTAGCGTCAAAGATATCGTCCGCTTCCGAGCGTCAGGCATACTTGA
GCCGGACCTACTTTTTTCGGTGCGAATGCATAGCCTGCTACCCTCCCCCA
GAAGAAACCGCCACCACCCCGTCCCGCCGCTCACGCGTCAGCGAGGGCGA
CGACGAACGGCAACTCACCGATCGAGACAAAGAGGGAAGAGCCATCGAGG
CGACGTTTTCGAAACGGACCGATTTCGCTTGTACTGAAGCAGAGAGCGGT
GGCTGTCCCGGCACGCTCCGTGTCGGAGTATCTCCTCCTCCACCTCCTCC
TTTTGCACCACCCACGCCCCCGCCGACGACCCAGGGTTGCATCAACTCCG
GTGTTGAAAGCTCTAATGTTCCAAGCCCCTGTATCAATCGTGTCCAAGCG
GTTGCTTCGCCATCGTCGACGTCGCCGACCCCCAGGAGAATTGAGGTGGT
GGTGTTGTGGTGTGACCATTGCGGGAGCCGCGTTCCGCCTGACCTGGCGG
ACGCGCTGCTGAAGGAGGACAAGGAGGACCGCCGGCTGTGGGAGGAGGCA
AAGGTGGCGATGTCAAGCTCCGACAAGGGAGCTGAACGTAGTGGAGGTGG
CGATGACGGGGAACTGAAAAGCATGCCGCCGCCAACGCGATCCCGTCCGA
ACACTGGGGAGCGGTCGTGCATATCCTCCACAACGGAGGATGGCTCGGTA
AATGCGGGCCCTTTTCCGGGGTCTTCTGCCTCGTCCGATGCGTTGAGTCT
TGTCGTGGAACGCATCCGATGGCGCGACCTCTACCTGACTACCACATCGA
TGCGGAGAGCCGTCGCACACGACATGCACGCGCGCGTTCTCGCGAGCCGT
GAAGACTTTCCCGGCGCCGCCGATGCTTGCGCAAGAGCGGTGAGCGTGTT
GAAGCGGAGGTATAGCCCCGAAGACCGGGAGCTGGGCATCGAGTTTCTCA
AGCTTGCGGAGCTGTGCTTCAATGCAGGCTGGACGGACAAATGTACCGCA
GCTTGTGTGAAGGCTAGGGAGTCGCTCGGGATTTGTCTGCAACCCGGCGA
TGAGCAGCTGGAAGCGTTGAACACCCTACAGGCTTTGTGCGCGGCGGTCT
ACCGTCGTTGA
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