mRNA_Ecto-sp13_S_contig6639.17496.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A6H5L155_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L155_9PHAE) HSP 1 Score: 582 bits (1499), Expect = 1.970e-203 Identity = 333/353 (94.33%), Postives = 337/353 (95.47%), Query Frame = 1
Query: 1 MHGSITTVQCGLLVLVLLSSPFSPTHGAHAFVSTPSAGVATVSRQAHTASSLTPSPSAITMVQPRRWTPAAFSRSRLENQQAVIETSTTVVQRSASGEGCQGATRHQGGTGVSPKKRARRIRKGIAMLAR-GPFREGMSNAGASEGLPKMGDRSACGNDGGEGTRDRALLLLPRLARWALLPSLALAGFAPAXXXXXXXXXXXXXXGAATALSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 1056
MHGSITT+QCGLLVLVLLSS P+HGAHAFVSTP AGVA VSRQAHTA SLTPSPSAITMVQP RWTPAA SRSRLENQQAVIETSTT VQRSASGE CQGATRHQGGTGVSPKKRARRI KGIAMLAR GPFRE MSNAGASEGLPKMGDRSACG+DGGEGTRDRALLLLPRLARWALLPSLALAGFAPAXXXXXXXXXXXX GAATALSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVG+IPA SPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV
Sbjct: 1 MHGSITTIQCGLLVLVLLSSSLWPSHGAHAFVSTPLAGVAAVSRQAHTALSLTPSPSAITMVQPCRWTPAALSRSRLENQQAVIETSTTAVQRSASGEDCQGATRHQGGTGVSPKKRARRITKGIAMLARRGPFRESMSNAGASEGLPKMGDRSACGDDGGEGTRDRALLLLPRLARWALLPSLALAGFAPAXXXXXXXXXXXXT-GAATALSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGIIPAASPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 352
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: D8LIU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU9_ECTSI) HSP 1 Score: 492 bits (1267), Expect = 2.290e-169 Identity = 278/293 (94.88%), Postives = 281/293 (95.90%), Query Frame = 1
Query: 181 MVQPRRWTPAAFSRSRLENQQAVIETSTTVVQRSASGEGCQGATRHQGGTGVSPKKRARRIRKGIAMLAR-GPFREGMSNAGASEGLPKMGDRSACGNDGGEGTRDRALLLLPRLARWALLPSLALAGFAPAXXXXXXXXXXXXXXGAATALSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 1056
MVQPRRWTPA+FSR R ENQQAVIETST QRSASGEGCQG TRHQGGTGVSPKKRARRI KGIAMLAR GPFR GMSNAGASEGLPKMGDRSACGNDGGEGTRDRALLLLPR+ARWALLPSLALAGFAPA XXXXXXXXXXXX GAATALSTLLTNRWYVWAVL+ASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPA SPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV
Sbjct: 1 MVQPRRWTPASFSRPRFENQQAVIETSTAAKQRSASGEGCQGTTRHQGGTGVSPKKRARRITKGIAMLARRGPFRGGMSNAGASEGLPKMGDRSACGNDGGEGTRDRALLLLPRVARWALLPSLALAGFAPAAXXXXXXXXXXXXTGAATALSTLLTNRWYVWAVLIASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPAASPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 293
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A835YW30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW30_9STRA) HSP 1 Score: 193 bits (491), Expect = 7.560e-55 Identity = 93/134 (69.40%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 655 WYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 1056
WY+W LM +SS GLWSE T+WGAA+SSPLVTML+TIT CN+GV+P SP Y VN+ VPLAVPLLL+DADL++V++++GTL+ACF++GA GTV+GT AA +VPLG+G DGWKIA+ALA+RHIGGAVNYVAV
Sbjct: 6 WYLWTFLMWASSFGLWSENTKWGAALSSPLVTMLITITACNIGVLPTASPVYTCVNKYLVPLAVPLLLYDADLKRVMKYSGTLMACFMLGAVGTVLGTVVAAKLVPLGMGADGWKIAAALASRHIGGAVNYVAV 139
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A7S4D9J7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9J7_HETAK) HSP 1 Score: 173 bits (438), Expect = 9.430e-48 Identity = 85/142 (59.86%), Postives = 113/142 (79.58%), Query Frame = 1
Query: 631 LSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 1056
LSTL + WY+W LM S++ GLWSERT+ GA +SSPLVTM +TI +CN+G++P+ + AYD +N+ VPLAVPLLLFDA+++ VLR G+++A F++GA GT++GT A +VPLGLG D WK+ +AL ARHIGGAVNYVAV
Sbjct: 89 LSTLHGDPWYIWTALMGSATFGLWSERTKLGATLSSPLVTMAVTILMCNLGLLPSHNAAYDVINKTLVPLAVPLLLFDANIKMVLRSTGSMMAAFLLGALGTIVGTLVGARLVPLGLGEDSWKVVAALCARHIGGAVNYVAV 230
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A7S3XZE0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZE0_HETAK) HSP 1 Score: 173 bits (438), Expect = 2.850e-46 Identity = 85/142 (59.86%), Postives = 113/142 (79.58%), Query Frame = 1
Query: 631 LSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 1056
LSTL + WY+W LM S++ GLWSERT+ GA +SSPLVTM +TI +CN+G++P+ + AYD +N+ VPLAVPLLLFDA+++ VLR G+++A F++GA GT++GT A +VPLGLG D WK+ +AL ARHIGGAVNYVAV
Sbjct: 89 LSTLHGDPWYIWTALMGSATFGLWSERTKLGATLSSPLVTMAVTILMCNLGLLPSHNAAYDVINKTLVPLAVPLLLFDANIKMVLRSTGSMMAAFLLGALGTIVGTLVGARLVPLGLGEDSWKVVAALCARHIGGAVNYVAV 230
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: W7TV24_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TV24_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.340e-37 Identity = 80/149 (53.69%), Postives = 113/149 (75.84%), Query Frame = 1
Query: 622 ATALSTLLTNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLG----LGGDGWKIASALAARHIGGAVNYVAV 1056
AT ++++ T+ W+VW++L+ +S+ G+ +ERT+ GAA+SSPL+TM + + CN+G +P+ +PAY +VN+ VPLA+PLLL DA+L KVL G LL FV+G+ GTV+GT AA VPLG G +GW IA+ALA+RHIGGAVN+VAV
Sbjct: 92 ATLMASMQTSPWWVWSMLLLASTTGVAAERTKIGAALSSPLITMAVALVACNLGFLPSAAPAYTSVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFVLGSIGTVLGTLIAAWFVPLGSLGAAGKEGWMIAAALASRHIGGAVNFVAV 240
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A7R9XXU4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XXU4_9VIRI) HSP 1 Score: 148 bits (374), Expect = 2.580e-37 Identity = 80/138 (57.97%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 646 TNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPL-GLGGDGWKIASALAARHIGGAVNYVAV 1056
T+ W VW +L+ + GLWSERT G A+S PLV+ LL + L N V+P ++ AY TVN +PLA+P+LL AD++KVLR G LL F +G+ GTV+GT AA AV PL LG DGWK+ASALAARH+GGAVNYVAV
Sbjct: 49 TDPWGVWTMLLVCGAGGLWSERTAAGKALSGPLVSTLLALALSNARVLPTSAAAYGTVNSALLPLAIPMLLLSADMRKVLRSTGRLLLAFGVGSLGTVVGTLAAYAVAPLRALGEDGWKVASALAARHVGGAVNYVAV 186
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A7S0QX31_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QX31_9CRYP) HSP 1 Score: 144 bits (363), Expect = 4.140e-36 Identity = 79/138 (57.25%), Postives = 104/138 (75.36%), Query Frame = 1
Query: 646 TNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPL-GLGGDGWKIASALAARHIGGAVNYVAV 1056
T+ W +W VL++ ++AGL +ERT+ GAA+SSPLVTMLLT+ LCN+G IP +P Y +VN+ VP+AVPLLLF ADL++V+ G LLA F +GA +V T AAA +P+ GL G WK A+AL +RHIGGA+NYVAV
Sbjct: 157 TDTWSLWLVLLSCATAGLMAERTKLGAALSSPLVTMLLTLALCNIGAIPFDAPLYSSVNRFLVPMAVPLLLFGADLRRVVADTGRLLAAFFVGAFASVASTVIAAAFIPMRGLDGA-WKFAAALCSRHIGGAINYVAV 293
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: L1IR25_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IR25_GUITC) HSP 1 Score: 140 bits (352), Expect = 1.160e-35 Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 655 WYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAV 1056
W +W ++A + GL +E+TR GAA+SSPLVTM +++ L N GV+P ++PAY+TVN+ VPLAVPLLLF ADL+KV++ G+LL F IGA T+ T AAAV P+ WKIA+AL +RHIGGA+NYVAV
Sbjct: 47 WAMWTAMLACACVGLRAEKTRVGAALSSPLVTMFISLILVNCGVLPTSAPAYNTVNKFLVPLAVPLLLFSADLRKVMKDTGSLLLAFFIGAFATLASTVLAAAVFPMNGVEGAWKIAAALCSRHIGGAINYVAV 180
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Match: A0A2K1JBS3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JBS3_PHYPA) HSP 1 Score: 142 bits (358), Expect = 8.130e-35 Identity = 77/138 (55.80%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 646 TNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPATSPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPL-GLGGDGWKIASALAARHIGGAVNYVAV 1056
T+ W W VL+A+ + GLWSE+T+WG+A+S LV+ L+ + NVG+I + +PAY VN+ +PLAVPLLLF AD+++VL G LL F IG+ TV+GT AA +VPL LG DGWKI +AL +RHIGGAVNYVAV
Sbjct: 99 TDSWGTWTVLLAAGAFGLWSEKTKWGSALSGALVSTLVGLFASNVGIIASEAPAYVIVNKFLLPLAVPLLLFGADMRRVLGSTGRLLGIFCIGSVATVLGTLAAMVMVPLKSLGPDGWKIGAALMSRHIGGAVNYVAV 236 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6639.17496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6639.17496.1 >prot_Ecto-sp13_S_contig6639.17496.1 ID=prot_Ecto-sp13_S_contig6639.17496.1|Name=mRNA_Ecto-sp13_S_contig6639.17496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp MHGSITTVQCGLLVLVLLSSPFSPTHGAHAFVSTPSAGVATVSRQAHTASback to top mRNA from alignment at Ecto-sp13_S_contig6639:454..3786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6639.17496.1 ID=mRNA_Ecto-sp13_S_contig6639.17496.1|Name=mRNA_Ecto-sp13_S_contig6639.17496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3333bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6639:454..3786- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6639:454..3786- >mRNA_Ecto-sp13_S_contig6639.17496.1 ID=mRNA_Ecto-sp13_S_contig6639.17496.1|Name=mRNA_Ecto-sp13_S_contig6639.17496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1056bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6639:454..3786- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |