mRNA_Ecto-sp13_S_contig66327.17494.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 222 bits (566), Expect = 2.410e-71 Identity = 106/154 (68.83%), Postives = 125/154 (81.17%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASLQ 462
G + + CL++L+VALNETC+G +WYTSTKELQ ASLEFC+ACRNY +HL VD QIPR LLA ADAP PHP+ LC TRVPRLRAR VTW+MR AAEL PIFA+TDVDCL+FG F GS+E V WPRRLK IEF +S FN+P+ L++WP SLQ
Sbjct: 8 GLTHNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQ 161
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 222 bits (565), Expect = 9.750e-69 Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRR 384
GPSRSSCLNALV+ALNETCNGE+WYTSTKELQLASLEFC+ACRNYQTLHL VDAQIPRRLLARADAP PHPELLCRTRVPRLRARRVTW MRKAAELSIPIFA+TDVDCLKFGE + ++ + W R
Sbjct: 107 GPSRSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFGETSLEALRL--WHGR 232
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 209 bits (533), Expect = 1.210e-63 Identity = 100/154 (64.94%), Postives = 124/154 (80.52%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASLQ 462
GP+R CL AL+VALNETC+G++WYTSTKELQLASL+FC+ACRN QT+HL VD QIPRRLLA ADAP PHP+ LC TRVPRLR+RRVTW+M AA+L PIFA+TD++ L+FG+ F S+E V WP L+T+EF S F++ + LV+WP LQ
Sbjct: 45 GPTRKFCLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQ 198
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 210 bits (534), Expect = 2.470e-62 Identity = 103/154 (66.88%), Postives = 120/154 (77.92%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASLQ 462
GP+RSSCL L VALNETC+G++WYTSTKELQLASLE CMACR+YQTLHL VDA PRRLLA ADAP PHP+ LC TRVPRLRARR TW++ A+ + IFA DVD L+FG+ F GS++ + WPRRLKTIEF SS N + V WPASL+
Sbjct: 130 GPTRSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLR 283
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.520e-59 Identity = 99/163 (60.74%), Postives = 122/163 (74.85%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIE---------FCLSSLFNEPVCLVEWPASLQ 462
GP+R SCLNA++VALNET +G++WYTSTKE QLASLEFC+ACRN+QTL L VD++ PRRLLA ADAP PHP+ LC TRVPRLRARRVTWD+ AA L I+++ D D L+F F S+E VAWPRRLKT+E F SLF++P+ V WP +L+
Sbjct: 6 GPARDSCLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLE 168
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 203 bits (517), Expect = 4.050e-59 Identity = 102/154 (66.23%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASLQ 462
GP+ ++CLNA+ VAL ET +G++WYTSTKELQLASLEFCMACR YQTLHL VD +IPR LLA AD P HP+ L R RVPRLRAR VTW+M AAEL PIFAL D+D L FG F GS+E V WPRRL++I F S FN P+ LV+WPASL+
Sbjct: 30 GPTSNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLK 183
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI) HSP 1 Score: 174 bits (441), Expect = 3.990e-51 Identity = 94/160 (58.75%), Postives = 113/160 (70.62%), Query Frame = 1
Query: 1 GPSRSSCLNALVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPEL-LCRTRVPRLRARRVTWDMRKAAELSIP----IFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASLQT 465
GP RSSCLNA+VVAL+ETC+G++WYTSTKELQLASL FC ACRN+QT+HL VD IPRRLLA ADAP P E + TR P + D+ A I +FA+TDVD L+FG DF G++E VAWPR LKTI+ S F +P+ L+EWP SLQT
Sbjct: 130 GPGRSSCLNAIVVALSETCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAP---THSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQT 286
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 176 bits (447), Expect = 5.740e-51 Identity = 89/135 (65.93%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 55 CNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASL 459
C+G+ WYTSTKELQ ASLEFC+ACR YQTL L VD Q PR LLA DAP PH + CRTRVPRLRARRV W+M A EL PIFAL DV L FG F GS+E VAWP+RLK I+F SLFN+P+ VE+P SL
Sbjct: 2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSL 136
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.420e-48 Identity = 90/144 (62.50%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 31 LVVALNETCNGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAPLPHPELLCRTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEFCLSSLFNEPVCLVEWPASLQ 462
L++ALNE C+G+ WYTSTKELQLASLEFC+ACR YQ L L VDAQ PR LLA DAP PH + CRTRVPRLRARRV W+M A EL +FAL DV+CL+FG F GS+E V WP LK I F SS FN+ ASLQ
Sbjct: 21 LILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIF-FSSEFNQXXXXXXXXASLQ 163
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Match: A0A6H5K4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE) HSP 1 Score: 113 bits (282), Expect = 5.100e-27 Identity = 67/136 (49.26%), Postives = 81/136 (59.56%), Query Frame = 1
Query: 13 SSCLNALVVALNETC-NGENWYTSTKELQLASLEFCMACRNYQTLHL*VDAQIPRRLLARADAP----LPHPELLC-RTRVPRLRARRVTWDMRKAAELSIPIFALTDVDCLKFGEDFVGSIEVVAWPRRLKTIEF 402
S CL A VAL +TC + E+WY ST +LQLASL FC+ACR+ TL L VD IPRRLLA P C R+RVPR AR VTW + ELS I+AL +VD F +I VAWPR+L+ +EF
Sbjct: 28 SRCLEAFRVALQQTCLDRESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEAVVAPAGPCQCGRSRVPRFHAREVTWHRQSCVELSASIYALAEVDFFILDGGFNRAIGAVAWPRKLRRLEF 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66327.17494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig66327.17494.1 >prot_Ecto-sp13_S_contig66327.17494.1 ID=prot_Ecto-sp13_S_contig66327.17494.1|Name=mRNA_Ecto-sp13_S_contig66327.17494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=115bp MLERPRRRFERDVQRGELVYVDQGAAAGVLGVLHGVQKLPDPPLVSRCTNback to top mRNA from alignment at Ecto-sp13_S_contig66327:136..601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig66327.17494.1 ID=mRNA_Ecto-sp13_S_contig66327.17494.1|Name=mRNA_Ecto-sp13_S_contig66327.17494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=466bp|location=Sequence derived from alignment at Ecto-sp13_S_contig66327:136..601+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig66327:136..601+ >mRNA_Ecto-sp13_S_contig66327.17494.1 ID=mRNA_Ecto-sp13_S_contig66327.17494.1|Name=mRNA_Ecto-sp13_S_contig66327.17494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=345bp|location=Sequence derived from alignment at Ecto-sp13_S_contig66327:136..601+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |