mRNA_Ecto-sp13_S_contig6608.17455.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6608.17455.1
Unique NamemRNA_Ecto-sp13_S_contig6608.17455.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A6H5L6U2_9PHAE (PKS III protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U2_9PHAE)

HSP 1 Score: 566 bits (1460), Expect = 2.450e-200
Identity = 302/317 (95.27%), Postives = 302/317 (95.27%), Query Frame = 2
Query:   53 MALLPTWLSLQGLGPLHVLFSLFAGLCGCWLVAARRRRTKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            M LLPTWLS Q LG  HVLFSL AGLCGCWLVAARRRRTKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAG       LGEELREDDAAIQAMLAESIL XXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLAT VAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV
Sbjct:    1 MVLLPTWLSWQELGRFHVLFSLLAGLCGCWLVAARRRRTKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGXXXXXXXLGEELREDDAAIQAMLAESILXXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATRVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 317          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: D7G1Y6_ECTSI (Polyketide Synthase III n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y6_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 6.100e-102
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 2
Query:  527 LRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            LRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV
Sbjct:   18 LRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 176          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: D8LJ35_ECTSI (Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LJ35_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 5.000e-61
Identity = 111/280 (39.64%), Postives = 158/280 (56.43%), Query Frame = 2
Query:  164 RTKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            +   D + ++ VI G++ GNP+YR ++ +A   A+      S I  VL+R+Y NSRI +RYF VPD     A                                      G  +FYP DGS +V  D R  +F E A+PL + VA+RA++E G+   D+ ++VVV+STG  GPGLD EL+K++GL  SV+R ++ F GC A +NG R A+ Y   +PG+ AL++ VEL S+H    D +NDAILHAIF DGCA AV+ G        G+LA++DN +WL+
Sbjct:   33 KKSKDEQTVYPVIAGMAIGNPQYRCTQNEALAVASKCPGLES-IKPVLERIYGNSRIGSRYFAVPDFTPGRA------------------------------------AKGDPLFYPADGSYQVPVDVRLDKFKEKAVPLVSDVARRAIKEAGLNVEDISKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDYVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGARKSECPKGTLAIVDNHAWLM 275          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A836CMD8_9STRA (Polyketide synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.160e-61
Identity = 119/308 (38.64%), Postives = 170/308 (55.19%), Query Frame = 2
Query:  113 SLFAGLCGCWL-----------VAARRRRTKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            ++ A L G WL           +A    R +   E ++ VI+G++TGNP YR +++QA   A       S +  VL+R+Y NSRI +RYF VPD     A             DD                          +FYP DGS +V    R  +F ECA+PL   VA+RA+ E G+ P D+ ++VVV+STG  GPGLD E++K + +  SV+R ++ F GC A +NG R+A+ Y   HPG+ AL++ VEL S+H    D +NDAILHAIF DGCA  V++G TA +A  G+LA++D+ + L+
Sbjct:   13 AVIAQLAGVWLPMVVASALTLVLALLVVRGRKREETMYPVIIGLATGNPPYRCTQKQALAIAQKVPGCES-VKPVLERIYGNSRIASRYFAVPDFTPDVAS-----------PDD-------------------------PLFYPADGSFQVPVSARLDKFRECAVPLVCSVARRAIMEAGLHPEDLDKLVVVSSTGFLGPGLDCEIIKRLRMKRSVDRSLIGFMGCAAAMNGFRIANDYVRCHPGKFALMLCVELSSVHTTFEDNINDAILHAIFADGCAACVLSGETASSAAKGTLAIVDDHAELM 283          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK)

HSP 1 Score: 204 bits (518), Expect = 7.810e-59
Identity = 109/280 (38.93%), Postives = 160/280 (57.14%), Query Frame = 2
Query:  170 KNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIAR--VLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            K+     + VI+G++TGNP Y+V++E+A + A     P+ P  R  V++R+Y N+RIN+RYFC+PD     A                                      G  +F+ ED   R   ++R  +F E A+PL T V + A+ + GV   D+ ++VVV+STG  GPGLD EL+KS+GL+  V+R ++ F GC A +NG R+ + Y   +PG+LALL  VEL S H    +  ND+ILHAIFGDG A AV++G T   A PG+LA++D+ +WL+
Sbjct:   31 KSSQSKRYPVIIGMATGNPAYKVTQEEACKIACSV--PALPKDRIPVVERIYGNTRINSRYFCIPDFTPEKA------------------------------------LPGDALFFDEDRMFRKPVEQRLDKFREKAVPLVTEVCRNAINQAGVAIDDIHKLVVVSSTGFLGPGLDCELIKSLGLSRGVDRSLIGFMGCAAAMNGFRVCNDYVKANPGKLALLCCVELSSPHTTFNNDTNDSILHAIFGDGAAAAVISGETKETAAPGALAIVDDHAWLM 272          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.310e-58
Identity = 111/275 (40.36%), Postives = 159/275 (57.82%), Query Frame = 2
Query:  182 EALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEP-GSLAVLDNRSWLV 1003
            + L   I+G++TGNP YR S+EQA + A    + +S I  VL R+Y NSRI+ RY  VPD              + L  DD                           F+ +D + R+  ++R  +F E A+PL T V  RAL++ GV  +++G++VVV+STG  GPGLD  L+K++GL  SV+R ++ F GC A +NG R+A+ YA +HPG+LAL+V VE+ S+H    D VNDAILHAIF DGCA AV++G    +A+  G   ++D   WL+
Sbjct:   42 QKLIPTIMGMATGNPPYRASQEQALQVAESCPECTS-IKPVLARIYGNSRIDYRYMAVPDFTPE----------QRLEGDD--------------------------NFFDDDLNFRMPVEKRLDKFREVAVPLVTDVCARALKDAGVQASEIGKLVVVSSTGFLGPGLDCSLIKTLGLERSVDRSLIGFMGCAAAMNGFRVANDYAASHPGKLALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAKAKGKFGIVDTHGWLM 279          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A7S3NPW3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPW3_9STRA)

HSP 1 Score: 201 bits (512), Expect = 6.370e-58
Identity = 113/280 (40.36%), Postives = 161/280 (57.50%), Query Frame = 2
Query:  167 TKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAG-RTARNAEPGSLAVLDNRSWLV 1003
            TK+  + ++ VILG++TGNP YRVS+++A   A    D  S I  VL R+Y NSRI+ RY  VPD                        QA+                 G E+F+P+D S ++  ++R   F E A+PL T V K AL +  + P  +G++VVV+STG  GPGLD EL+K++GL+ SV+R ++ F GC A +NG R+A+ YAV +PG+LAL+  VE+ S+H    D VNDAILHAIF DGCA AV++G +       G   ++D  + L+
Sbjct:   32 TKSGQDKVYPVILGMATGNPPYRVSQQEALAIAESCPDCGS-IKPVLARIYGNSRIDYRYMAVPDFTPE--------------------QAI----------------KGDEIFFPKDKSFKMPVEKRLDMFREKAIPLVTRVCKAALEDAKIAPELIGKLVVVSSTGFLGPGLDCELIKTLGLSRSVDRSLIGFMGCAAAMNGFRVANDYAVANPGKLALMCCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGAPRAKGKFGIIDTHACLM 274          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A6T7DYK4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DYK4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.380e-56
Identity = 108/288 (37.50%), Postives = 163/288 (56.60%), Query Frame = 2
Query:  152 ARRRRTKNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYP--EDGS--LRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            A + +  +  E  + +ILG +TGNPEY+V + +A + A  +   S     VLDR+Y NS+I +RY CVPD + +            L+ DD                          +FYP  +DGS   ++  + R  +F E A+PL + V K+A+ + G+   D+G++VVV+STG  GPGLD  +++ IGL+  V+R ++ F GC A +NG R+   Y  +H  + AL+  VEL S+H    D +ND+ILHAIFGDGCA AV+ GRTA  A  G+ A++D+ +WL+
Sbjct:    5 AMQPKKASGSETKYPIILGFATGNPEYKVMQTEALKVAKTSPGGSQIAPGVLDRIYGNSKITSRYLCVPDFSPS------------LKRDD------------------------DPLFYPPTDDGSDWYKIPVNVRLDKFREKAVPLVSAVCKKAVDDAGISMEDIGKLVVVSSTGFLGPGLDCAIIEEIGLSRGVDRALIGFMGCAAAMNGFRVGMDYVRSHE-KAALVCCVELSSVHTTFDDNINDSILHAIFGDGCAAAVLGGRTATEAPKGAFAIIDDHAWLM 255          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A7S4D871_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D871_HETAK)

HSP 1 Score: 187 bits (476), Expect = 2.560e-54
Identity = 104/268 (38.81%), Postives = 149/268 (55.60%), Query Frame = 2
Query:  170 KNDGEALFAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIAR--VLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPG 967
            K+     + VI+G++TGNP Y+V++E+A + A     P+ P  R  V++R+Y N+RIN+RYFC+PD     A                                      G  +F+ ED   R   ++R  +F E A+PL T V + A+ + GV   D+ ++VVV+STG  GPGLD EL+KS+GL+  V+R ++ F GC A +NG R+ + Y   +PG+LALL  VEL S H    +  ND+ILHAIFGDG A AV++G T   AE G
Sbjct:   31 KSSQSKRYPVIIGMATGNPAYKVTQEEACKIACSV--PALPKDRIPVVERIYGNTRINSRYFCIPDFTPEKA------------------------------------LPGDALFFDEDRMFRKPVEQRLDKFREKAVPLVTEVCRNAINQAGVAIDDIHKLVVVSSTGFLGPGLDCELIKSLGLSRGVDRSLIGFMGCAAAMNGFRVCNDYVKANPGKLALLCCVELSSPHTTFNNDTNDSILHAIFGDGAAAAVISGETKETAEIG 260          
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA)

HSP 1 Score: 192 bits (487), Expect = 8.220e-54
Identity = 105/281 (37.37%), Postives = 157/281 (55.87%), Query Frame = 2
Query:  164 RTKNDGEAL-FAVILGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFCVPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAXXXXXXXXXXGAEMFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIVVVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 1003
            ++ + GE   + VI+G++TGNP Y+ ++++A    A        +  VL R+Y NSRI  R+F VPD                    D A+                    G EMF+P D S +V  + R  +F E A+PL T +A+ A+    V  +D+ ++VVV+STG  GPGLD EL+  +GL  SV+R ++ F GC A +NG R+A+ Y   + G+ ALLV VE+ S+H    D +ND+ILHAIF DGCA AV++G T  +   G+LA++D+ +WL+
Sbjct:   71 KSSSSGEKKRYPVIIGMATGNPPYKCTQQEALA-VAQKVPGIEKVQAVLPRIYGNSRIGTRHFAVPDFTP-----------------DRALP-------------------GDEMFFPADHSFKVPVETRLAKFKEVAVPLVTRIAREAIENANVAISDIHKLVVVSSTGFLGPGLDCELINQLGLARSVDRSLIGFMGCAAAMNGFRIANDYCKANAGKYALLVCVEISSVHTTFDDDINDSILHAIFADGCAAAVLSGETKDSIPKGTLAIVDDHAWLM 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6608.17455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6U2_9PHAE2.450e-20095.27PKS III protein n=1 Tax=Ectocarpus sp. CCAP 1310/3... [more]
D7G1Y6_ECTSI6.100e-102100.00Polyketide Synthase III n=1 Tax=Ectocarpus silicul... [more]
D8LJ35_ECTSI5.000e-6139.64Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID... [more]
A0A836CMD8_9STRA6.160e-6138.64Polyketide synthase III n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RDH2_HETAK7.810e-5938.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SDG4_9STRA1.310e-5840.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NPW3_9STRA6.370e-5840.36Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6T7DYK4_9STRA2.380e-5637.50Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4D871_HETAK2.560e-5438.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V1U6_9STRA8.220e-5437.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6608contigEcto-sp13_S_contig6608:333..4886 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score210.7
Seed ortholog evalue1e-51
Seed eggNOG ortholog2880.D8LJ35
Model size1003
KEGG rclassRC00004,RC02726,RC02970
KEGG koko:K00660,ko:K13234,ko:K21384
KEGG ReactionR01613,R06568,R07987,R07988,R07989,R08808,R08810
KEGG Pathwayko00941,ko00945,ko01100,ko01110,ko04712,map00941,map00945,map01100,map01110,map04712
KEGG ModuleM00137
Hectar predicted targeting categorysignal peptide
GOsGO:0000325,GO:0001101,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0006810,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009611,GO:0009628,GO:0009629,GO:0009705,GO:0009719,GO:0009725,GO:0009733,GO:0009753,GO:0009812,GO:0009813,GO:0009889,GO:0009914,GO:0009926,GO:0009962,GO:0010033,GO:0010224,GO:0010817,GO:0012505,GO:0016020,GO:0019222,GO:0031090,GO:0031537,GO:0031540,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0060918,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0098588,GO:0098805,GO:1901576,GO:1901700
Exons5
EggNOG free text desc.naringenin-chalcone synthase activity
EggNOG OGs2S4A6@2759,COG3424@1
Ec32 ortholog descriptionPolyketide Synthase III
Ec32 orthologEc-07_003670.2
EC2.3.1.177,2.3.1.208,2.3.1.217,2.3.1.74
Cds size951
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01008
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6608.17455.1prot_Ecto-sp13_S_contig6608.17455.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6608 333..4834 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463910.3075445-CDS-Ecto-sp13_S_contig6608:332..4671681463910.3075445-CDS-Ecto-sp13_S_contig6608:332..467Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6608 333..467 -
1681463910.3200965-CDS-Ecto-sp13_S_contig6608:1276..14741681463910.3200965-CDS-Ecto-sp13_S_contig6608:1276..1474Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6608 1277..1474 -
1681463910.3309143-CDS-Ecto-sp13_S_contig6608:1914..20591681463910.3309143-CDS-Ecto-sp13_S_contig6608:1914..2059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6608 1915..2059 -
1681463910.3450692-CDS-Ecto-sp13_S_contig6608:2723..30411681463910.3450692-CDS-Ecto-sp13_S_contig6608:2723..3041Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6608 2724..3041 -
1681463910.3559053-CDS-Ecto-sp13_S_contig6608:4679..48341681463910.3559053-CDS-Ecto-sp13_S_contig6608:4679..4834Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6608 4680..4834 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463910.3710012-UTR-Ecto-sp13_S_contig6608:4834..48861681463910.3710012-UTR-Ecto-sp13_S_contig6608:4834..4886Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6608 4835..4886 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6608.17455.1

>prot_Ecto-sp13_S_contig6608.17455.1 ID=prot_Ecto-sp13_S_contig6608.17455.1|Name=mRNA_Ecto-sp13_S_contig6608.17455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
MALLPTWLSLQGLGPLHVLFSLFAGLCGCWLVAARRRRTKNDGEALFAVI
LGISTGNPEYRVSKEQAFRHAAGATDPSSPIARVLDRVYNNSRINNRYFC
VPDLAAAGADGGGSGLGEELREDDAAIQAMLAESILAEEEGGGGAAAGAE
MFYPEDGSLRVNTDRRFQRFAECALPLATGVAKRALREVGVGPADVGRIV
VVTSTGVCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYA
VTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTAR
NAEPGSLAVLDNRSWLV
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mRNA from alignment at Ecto-sp13_S_contig6608:333..4886-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6608.17455.1 ID=mRNA_Ecto-sp13_S_contig6608.17455.1|Name=mRNA_Ecto-sp13_S_contig6608.17455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4554bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6608:333..4886- (Ectocarpus species13 EcNAP12_S_4_19m)
ACCGGGCTGAGAGCCAGCACTCGGAACAGAGGCAGAGACAGAGCGAGCGG AAATGGCGCTACTACCGACATGGTTGTCGTTGCAGGGACTCGGCCCTTTG CACGTGCTGTTCTCGTTGTTTGCCGGCTTGTGCGGCTGTTGGCTTGTGGC AGCAAGGAGACGGCGCACGAAAAACGACGGGGAGGCCTTGTTCGCTGTGA TACTTGGGTAAGAGGTTCAGAGAGAGCACAGCAGGCCAGGCTTCTAACAC ACAGAACCAGCTAGCTGGTAGACGCGTGTTTGGTTGACTGCTGCTGTTCA TCGCCTACTTGCGGGATAATTTATTTGCTAGCATGTCCTCTGTTCGGCAG CGGTAGCCGTCGCGACGCCACAGAGATATGATGCGGTTTCTCGCGACAAA AGCGCGAGGCAACCGGAGATCAAAATTCAATTTTCAAATCCAGCCGGTTT TCCTCCACTCACTGAAAAGACTCCACCACATCCCGTTCGACTGTGGGTAT ATCTCGAATGGGTAGTCTTTCTGTGCGTGTATTTATTTCTCCTTAATGAT TTTCGACCTCTGTCGGTGGGCGACATATGCGTAAGATACCACACCCCCTG GACGGATTTTCAAAGCTCGACTACTCCACGAAGAAAAGGATTCATTAACC AAGCAATACGTTTTCGGAAAGATCTCGACGAGACGGTTCCATTCCGCCAT GTATATTCGGCAGTCACTCTTCTACTCTAAGGTATATATAATAGGAGTAG TCGATCTTAGAAAATCGGTGCAGGGGGTGCGGTATCTTGTGTCACCTACT GCTGCAAGTTTAGTCTACATACGGTCGGCGGAGACACAAGCAAGCGTACA GCACCGTGTCTTGTTCGTGTGTGCATGCACGGATTAGGACCAAAACGGGA CTAGCTAAACGGGACTGTGTTTTGTGGTGTCGCTGATAGGAACTGATCGT TACCCTGGGTTGGGATAATGGTTGATCCACGGTGCTCGGGGCTGTGAGAA TGAACGCAGCGTGTTCACTCTCTCTTCCGCCACCTTGTGTCTGAGTCTTG GTTTCCTCTACTGTCCTCAATACAAATGATACGCAAGCAGTTCAACACAC ACCAGACTTTTACGAACACGTGTGTCCCCGCTCAACATGTGTGATTGGAT ATGTCACCTCAACATGCGCATTGGCCACCCACCCTCGGAGTATCTTGGGT CGTCCAGCGGTAGCGAGCTAGTAGTCGGTGTCTTGTCGACATCCATGGCA TGCAAGCCAAAGGTTCCTTCGGACCCGAAGCTCTCTCGCCGTCTCTCAGT AACAACCCATCGTTATCTAACAGAGTCAAACCTGATGCGTACGGCCGTCA TTGCTGCTGCGGCTGTTGTTGTTGTGATTCGCTCGGTGGTACTTGGTGCC AAACATACGCTCCAAGTGACAAAATCAGTATGTATGCAAATCCGGGGCGG GCGAGATGTTATCCCAACCCTCTTCTCCACGCCGCTGACTGCTGTGGATA AGTAACAGGGCCGAAAAGGTCCCATTTCGAGGGCCGCGATACGTGTGGGA CGTCTGTGTTCTCTGTCCCGTCATCGGTGGTCGAGGCAGAGGGGAGGGAG CGGACCACCCATACGGCTTCCAGTACCAGCCGAATTTTTTTATTGGCACG CCTCTCCTTTCGCCGCCCCCCCCCCGCTCCTAACCCACCCCCGTAGGATT GGGGTCAAGTTTCATTGCCGTCGTGCTCTGCACATAGCTTATCCACCTGT AGTTGTTGGTTTGATGCAGCATCCATCAACCCCCACCTCCCATTTGCTGG CGGTTTACTCTTCTTTTTTTTTCCTACTCCGATCCCAACAACAAGCATTT CGACGGGAAATCCCGAGTATCGGGTTTCCAAGGAGCAGGCGTTTCGGCAC GCGGCGGGCGCGACCGATCCGTCGAGCCCCATCGCGCGCGTCCTCGATCG GGTCTACAACAACTCCCGGATCAACAATCGGTATTTCTGCGTACCCGACC TGGCGGCAGCGGGAGCGGACGGGGGGGGATCAGGGCTGGGCGAGGAGCTG CGGGAGGATGACGCCGCCATCCAAGCGATGCTCGCGGAAAGCATTCTAGC GGAAGAGGAGGGGGGGGGGGGAGCAGCGGCGGGGGCGGAGATGTTTTACC CCGAGGATGGCAGGTGAAGGGAATGAAGGGCTGCTCTAGGTTGTCGGAGG TCAACTCTTGCACTAGGTTGAACGTGGTGTATTGTAGGGGGCAGCTTACG ACCGCCCTTCGACTCTTTAAGTTGCTAAGCTCGTCCGTTCAGTTCACTGT ACGGCCATGGTCATCGTGGTGCAAAACCGCTGCACGTGCCTCTGCCGAAA AGGGGAGAACGAGAGAGAGAGAGAGAGCTAGTGCATAATGCACCCTTCTG CTAATATTCTCCGGTTGCTGGGAACCCTCCCTCGTCCCCTCCCTTCGCCG CGGCCGTTCTCCGTGTATTCCGGCGCGTTGGTGCAAGCATCACGCCCTCA TGGTTCGCGGAAACCCGAAGCGCCACTACCGTGCTGCGTCGTCCCCATTC CAGAGGGATGTCCCGCCGTTTTGCGAGAGATGCAAGGGTCCAAGGGTCTA GGCTATGCTCTGGAGACAGCAGTGGCAATGCACACATGATAGGGAGAGTC CCCCCCTCCTCTCTTCGGTCCTTCCCTTGATGTTCGTTGGCGTTCTTTAT GTCTCGCCGCATATAGCGAGTACCCCCGACCCTCCACACCCCCTTCGTGC AGTCCGGCCCTTCTTTGTTTGATATTCTGTGCTGCTGGCGTTTTCCTTTT TTTTTCTTTGTTTCGTCACCAAATCAGCTTGAGGGTTAACACCGACCGAC GATTCCAGCGGTTCGCCGAGTGCGCGTTGCCTCTGGCCACGGGGGTCGCC AAGAGGGCTCTGAGAGAGGTCGGCGTGGGACCCGCGGATGTCGGGAGGAT CGTGGTCGTCACGTCCACGGGGGTGCGTGACAGTGCCGAGGCGACGGTTC CAACCACACCTGCTTCCTTCCATCCGCACTTGCTTCCATCCACACACTTG CGTGTCACATTGTCCGAGAAAAGCTTTGTCTCATCGGATAAGGAATGAAA GGGGGGTGGATCATGCGACCGTCTCCCTCGCAATGTGTATGGCACGACAT CGTATCTTTTTGTTTATGGCACGATACCGTATCCCTCAGTACACCTTTTG CCTCCGAGGAGAGCATGTATCCTTCAAAAATGGCGAGCCCACCCGGAAGA GTTTTCCGTTTCCGCACCAGATCAAGGCGTCTTCTTGCTACCCACGATGT TCCCATCGGTTTTCGTGACCCCCAACGCCTCAATAATAGGCACCCAATCG CCGCTATTTAGTTGTCGCCACCAACCTGTTGGTTATCGTCCTACTGGTTG GGGACCTTAAAGGTGTGCGGGCCGGGGCTTGACGGGGAGCTCGTCAAGAG CATCGGGCTCAACCACTCGGTGGAGAGGGAGGTGGTGTCCTTCCAGGGGT GCGGCGCCGGGATCAACGGCCTACGCCTGGCCTCGCAGTACGCGGTGACG CACCCCGGGCGGCTGGCACTGCTAGTCTCGGTGGAACTCCCCTCCTTGCA CATGCACAAGGTGCGTGTGATTGGGTGTTTTCAGAACATGTAAACACAAT CGCAGAAAGACTGGCGGTACGCCCGTTCTAGATATAACCACATCGAAGGG GATGTGTTGAAGTCTTTGCGATGCATAGCAAACAAACCGACTGGATATTG GGCTTATTTCGGGTCTAATTATGCTTGTACACAGAGTTATGATCAGCGAT GTGATGCCTACTAGTACTAACGTAGTCGCAAGAACATCTGAGAAGGTTTA AATTCCGTAACAAAAATGACCTTGTCAGATTTGTGGAGTGCACACGCAAG CCCTACATGCCCGCGGGGAGGTGGTTGCATGCGCGAAAGTGTCAGCACGT ACTTGCTCCACGACGTCGAATGTTGGCAGCTCTTCGCAAGCGATGGCAAT CAAGCGGAAGCTTCCCCTGGAAGGCTTCGTCGCACATTTTGATGGCTGTG GAAATGATCAGTTTTTTTTTTTAGACCACGGGGAGAGTTTTGAACGATCT TACGCCGGCCGCGACTGGTCAAATTTTTGGTGCACAAACCCTCGATTGCA GCGCTCTCTGCCCTCCCTGTGCCGGGTGCCATGTAGCAGTAGACAACGAT ACTTGGCAGCTTTCCGCCACAACCACAAACCACGACTTTCCCCCGATGTA GCTTTCACTATCTACAGCAGTGCCTCTTCGCCCTTGCCGCAAGAAGACAA CGCCGTCCAGACTACTCCCGCTTTGTTTATCGCTCCACGCCACACCGCTG TGTTTTTGCCTGTTGCGTTTCATTCTCACAACTGGGGCTGCCGTAAATGT AACGGCAAAACGAATGCAGGGGGACACGGTGAACGACGCGATCTTGCACG CGATCTTCGGGGACGGGTGTGCGGTGGCGGTGGTGGCCGGGCGGACGGCA AGAAACGCCGAGCCGGGGTCCTTGGCGGTCCTGGACAACCGATCCTGGCT GGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6608:333..4886-

>mRNA_Ecto-sp13_S_contig6608.17455.1 ID=mRNA_Ecto-sp13_S_contig6608.17455.1|Name=mRNA_Ecto-sp13_S_contig6608.17455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6608:333..4886- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGCTACTACCGACATGGTTGTCGTTGCAGGGACTCGGCCCTTTGCA
CGTGCTGTTCTCGTTGTTTGCCGGCTTGTGCGGCTGTTGGCTTGTGGCAG
CAAGGAGACGGCGCACGAAAAACGACGGGGAGGCCTTGTTCGCTGTGATA
CTTGGCATTTCGACGGGAAATCCCGAGTATCGGGTTTCCAAGGAGCAGGC
GTTTCGGCACGCGGCGGGCGCGACCGATCCGTCGAGCCCCATCGCGCGCG
TCCTCGATCGGGTCTACAACAACTCCCGGATCAACAATCGGTATTTCTGC
GTACCCGACCTGGCGGCAGCGGGAGCGGACGGGGGGGGATCAGGGCTGGG
CGAGGAGCTGCGGGAGGATGACGCCGCCATCCAAGCGATGCTCGCGGAAA
GCATTCTAGCGGAAGAGGAGGGGGGGGGGGGAGCAGCGGCGGGGGCGGAG
ATGTTTTACCCCGAGGATGGCAGCTTGAGGGTTAACACCGACCGACGATT
CCAGCGGTTCGCCGAGTGCGCGTTGCCTCTGGCCACGGGGGTCGCCAAGA
GGGCTCTGAGAGAGGTCGGCGTGGGACCCGCGGATGTCGGGAGGATCGTG
GTCGTCACGTCCACGGGGGTGTGCGGGCCGGGGCTTGACGGGGAGCTCGT
CAAGAGCATCGGGCTCAACCACTCGGTGGAGAGGGAGGTGGTGTCCTTCC
AGGGGTGCGGCGCCGGGATCAACGGCCTACGCCTGGCCTCGCAGTACGCG
GTGACGCACCCCGGGCGGCTGGCACTGCTAGTCTCGGTGGAACTCCCCTC
CTTGCACATGCACAAGGGGGACACGGTGAACGACGCGATCTTGCACGCGA
TCTTCGGGGACGGGTGTGCGGTGGCGGTGGTGGCCGGGCGGACGGCAAGA
AACGCCGAGCCGGGGTCCTTGGCGGTCCTGGACAACCGATCCTGGCTGGT
G
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