mRNA_Ecto-sp13_S_contig6600.17447.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A6H5JJB5_9PHAE (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJB5_9PHAE) HSP 1 Score: 699 bits (1805), Expect = 7.790e-249 Identity = 345/363 (95.04%), Postives = 356/363 (98.07%), Query Frame = 2
Query: 35 MSTAADEGKPKVAATTPPSSTSTRRKTALDFNLPKGDNFFLNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVVTRGTPDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDWGAARLEAGAQQLT 1123
M T AD GKPK+A TTPPSSTSTRRKTALDFNLPKGDNFF+NSRKQRLHLRTFLPE+GVEMKALLFWYHGYAAHI+GPTFREFAEGM+A GYAVIAVDQHGHGYSDGATVL+NDYKHLLEDNIAILDVVTRGTPDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVM NCPAIRANPPKEPVLFLLKHV+APLFPSRQIP+FMEKVS+PELVWLK EH+EMGALDK+GQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDWGAARLEAGAQQLT
Sbjct: 1 MRTVADGGKPKIATTTPPSSTSTRRKTALDFNLPKGDNFFINSRKQRLHLRTFLPESGVEMKALLFWYHGYAAHISGPTFREFAEGMAADGYAVIAVDQHGHGYSDGATVLINDYKHLLEDNIAILDVVTRGTPDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMTNCPAIRANPPKEPVLFLLKHVIAPLFPSRQIPKFMEKVSLPELVWLKPEHIEMGALDKIGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDWGAARLEAGAQQLT 363
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A835Z2I8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I8_9STRA) HSP 1 Score: 239 bits (610), Expect = 9.650e-69 Identity = 138/339 (40.71%), Postives = 190/339 (56.05%), Query Frame = 2
Query: 113 TALDFNLPKGDNFFLNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVVTRGTPDGERSNLGLDPDIRD---KMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDWGAARLEAGAQQL 1120
TA +N P ++F ++R +RLH+R FLP++ ++K ++ + HGY AH+N T R F + M+A G V D GHG+S G + +Y +ED + +L +V D S L D + + +PF GQSLGGGL + + P +R LG N P VLF L++V A LFP RQ+P +E+V +P L+W+ LD+ G PGGLGW MR GTG QL+DML ++ S + +V FPF V+HDPEDG+V FEGTQ LL AST V RG+E+ E+ GLKHDLL+NA ++ T W RLE A L
Sbjct: 46 TAYYYNAPDSGHWFTSTRGERLHVRRFLPDSPADLKCVVLFLHGYGAHVNSTTPRAFGKAMAAAGVGVFMYDYVGHGHSQGERAYVANYLDWVEDAVLLLKMVVESGCDVPESQACLGADAAEWGPALKAVPFAIMGQSLGGGL-------IAQGSALPT--SRFLG----------NTPHPVVLFFLRNVAARLFPLRQLPDSLERVQIPSLIWVSEADQVRTKLDQWGLPGGLGWGHNMRLGTGLQLLDMLDDIRSNVEKVAFPFAVIHDPEDGVVLFEGTQLLLARASTAEGVYRGRELYELRGLKHDLLTNAGPAVVDFVTQWLRDRLEHSASDL 365
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A7S2UYI4_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYI4_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.490e-65 Identity = 128/362 (35.36%), Postives = 190/362 (52.49%), Query Frame = 2
Query: 113 TALDFNLPKGDNFFLNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVVTRGTPDGERS---------------------------NLGLDPDIRDKMT--QLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGA-LDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADV-PRGKEVKEMLGLKHDLLSNATTQMLAAYTDWGAARLEA 1105
T + N P+ F+N+R Q++H+R +LPE+ +++ ++ W HGY HIN P E MS G A+I +D HGHGYS+G + D+ H ++D + L++V P G R+ NLG+ D +K+ ++PFF G+SLGGGL++LMA Q+ ++ +R G PA+ PP PV++LL+H+V P FP +P+ +E V+ P L+W E ++ D GQPG L W MRF TG LI M + S L EV PF ++HDP+DG+ F G+Q L D A T A R K + G HD+L N T + ++ + W L+A
Sbjct: 5 TDISLNAPQSGFSFVNNRNQKIHVRHYLPESPKKVRGVVLWIHGYGGHINDPKGTTLGESMSKKGLAIITMDLHGHGYSEGERAYLEDWNHFVDDELQFLEMVC--LPPGSRACKNKEGSSXXXXXXXXXXXASQLDSGENLGIPADFLEKLQSPEIPFFLAGESLGGGLAVLMATQMSGHA---HLASRFKGFAVIAPAVVGKPPPYPVVWLLQHLVLPFFPKTLVPQMIEPVNDPNLLWKSPEIIKRNTEQDTWGQPGALAWGHNMRFATGFSLIRMTEHIRSILPEVTCPFYIVHDPDDGVCEFSGSQMLFDLAKTDATKWARAKVLDPFTGSLHDILWNETEEAISRISSWCLEALDA 361
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: D8LTQ2_ECTSI (Putative phospholipase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ2_ECTSI) HSP 1 Score: 231 bits (588), Expect = 5.490e-63 Identity = 129/337 (38.28%), Postives = 191/337 (56.68%), Query Frame = 2
Query: 128 NLPKGDNFFLNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVV-------TRGTPD--GERSNLGLDPDI-------RDKMTQLPFFFGGQSLGGGLSLLMAMQL--KNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDW 1084
NLP+ + +F+N R + +H R++LP++ E+KA++ + HGY AH N P + M G + +D GHGYS G + DY H ++D +L++V +RG P G+ + G+ P + R ++ ++PFF G+SLGG LS+L+ + L N + P R G + PAI+ NPP ++ L+H+V PL P QIP +E V+ PE+ L+ + D +G PGGLGW G MRF TG LID+ E+ RL V FPFL++HDPED IVRF+ +++L ASTP PRG+E++ M G H LL+N + DW
Sbjct: 74 NLPQSEEYFINERGRVIHFRSYLPQSADEIKAVVLFSHGYGAHCNSPRKHQMGMSMPEKGLCMYQMDLEGHGYSGGERAYIEDYNHWVDDYRQLLELVAGDRIDTSRGGPSRAGDEA-AGVVPHVLTATAAQRKRLQEVPFFVAGESLGGALSILLGLSLHESNHSLLP----RFKGQVLLAPAIKGNPPPAMLVAALRHLVVPLVPRWQIPSCLESVNRPEMCVLEVDERRHANHDVLGYPGGLGWGGNMRFRTGLNLIDLTAEVSRRLEHVKFPFLIMHDPEDSIVRFDSSKELTYRASTPHGSPRGRELRPMKGWLHCLLTNCPEIAIQHLQDW 405
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A7S3YBG7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBG7_HETAK) HSP 1 Score: 196 bits (499), Expect = 8.920e-54 Identity = 109/287 (37.98%), Postives = 167/287 (58.19%), Query Frame = 2
Query: 128 NLPKGDNFFLNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVVTRGTPDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKN-DTTRPNVGA--RLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEAST 979
N P+ + FFLN + +L +R LP + + A + + HGY AH+N A+ + G A ++ DQ HGYSDG VL+ + + D + L + G D + L + DI K+ ++PFF G+S GG L++L +++L++ + P+ G + PAI ANPP PV++LL++ VA FP+ +P F+E V PEL W + E ++ ALD + GGLGW RF +G ++ L + +RL +V FP+L LHDPEDGIVRFEG+++L +EA+T
Sbjct: 21 NAPRPEGFFLNRQGLKLSVRCTLPSSPEKCWAAVLYLHGYCAHMNSKPKILLAQEFAEKGIAFLSYDQAAHGYSDGERVLLPSHVEYVADALQFLSMTVGGEQDSQDGELVIPKDILFKLREVPFFIAGESFGGSLAILTSLELQDRKESSPDYAEFQNYAGTILLAPAIVANPPPAPVVWLLENTVARWFPAACVPSFLESVHRPELNWKRQEDIDRVALDSQ-ENGGLGWGRNTRFQSGLNMLRALAAVRARLRDVRFPYLALHDPEDGIVRFEGSRRLHEEAAT 306
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: D8LIE5_ECTSI (Putative phospholipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE5_ECTSI) HSP 1 Score: 191 bits (485), Expect = 2.740e-52 Identity = 104/263 (39.54%), Postives = 146/263 (55.51%), Query Frame = 2
Query: 305 GYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVVTRGT-PDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQL--KNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDW 1084
G A + +D GHGYS+G Y H ++D +L+ + G L +++ +P F G+SLGGGLSL + L + P R GV PAI+ NPP PV+ L++VVAP+ P QIP +E V P VW E D+ G PG LGW M+F G ++DM+G +YSRLS+V FPFL++HDP D IV+F ++L+++A+TP D PR +E+KEM G HDLL+N ++ TDW
Sbjct: 5 GIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAIAGGGFTSPAAGKFSLSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLP----RFKGVCLMAPAIQGNPPPAPVVAFLRYVVAPVIPKWQIPNALESVKNPTQVWKTEEDRAKADRDQWGNPGALGWGHNMKFNMGLNMMDMVGVVYSRLSDVKFPFLIMHDPGDAIVQFGPARELMEKAATPKDDPRARELKEMDGWLHDLLTNCPDLIIGHLTDW 263
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A836C8U6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8U6_9STRA) HSP 1 Score: 191 bits (484), Expect = 3.390e-51 Identity = 106/305 (34.75%), Postives = 169/305 (55.41%), Query Frame = 2
Query: 194 LPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAIL----DVVTRGTPDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADV----PRGKEVKEMLGLKHDLLSNATTQMLAAYTDW 1084
+PE +KA++F++HGY H + + + + +S G AV+ D GHGYS+G +N ++H ++D+ ++ D +G NLG R + ++P+F G+SLGG ++ + ++L+++ V R G P I+ NPP +PV+ L++++APL P R+IP+ ++ V +PE WL+ E E D G LGW MRF G ++D + S L +V FPFL LHDPED IV +EG+Q L ++A+TP D R +E++ M G HD+L+NA + DW
Sbjct: 1 MPEDASSIKAVVFFFHGYGGHNSYISKLWYGKYLSERGMAVVMPDLVGHGYSEGTRAYVNSWQHWIDDHRMLIGLVCDAAATAAANGTEFNLGFTEQQRSALARVPYFLTGESLGGAQAIALGLRLQDEEA--GVARRFAGACVIAPGIKGNPPPKPVVAALRYLIAPLVPYREIPKALDSVFLPEKAWLRPEDREGCLQDGWGS---LGWGKQMRFRMGLNMLDQAQYVESSLHKVRFPFLSLHDPEDVIVLYEGSQLLSEKAATPPDEGGAPSRSRELQPMKGCLHDMLTNACLLVSERVHDW 300
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A7R9U9R1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9R1_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.510e-49 Identity = 112/338 (33.14%), Postives = 190/338 (56.21%), Query Frame = 2
Query: 122 DFNLPKGDNFFLNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVVT--RGTPDGE---RSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKN-------DTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEKVSVPELVWLKSEHVEMGALDKVGQPGGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDWGAARL 1099
D+ P N+F NSR QR+H R +LPE + K+LLF +HG +H N P F FAE + A G ++++D HGHGYS+G L+ D HL E+ +++ + R E L D + +++ LP+ G S+G G ++ + +++++ + R V RL GVM PA++A P E V+++L++++APL P Q+P F++K + L+W ++ +D L + R+ T + L+ + ++ L +VDFPF++LHDP+D IV +EG++ L++ + T AD K ++ GL+HD++SN T+ +L + A+RL
Sbjct: 31 DWPTPATRNYFRNSRGQRIHFRYYLPEG--QPKSLLFVFHGLTSHCNTPIFDTFAERLGASGVVLVSLDFHGHGYSEGERCLIWDGAHLDEEAFSVVALFAGPRALAPAEYNLEEPLSHDAEQLRRLSLLPYALAGGSMGAGAAMNVGLKIRSLSRSAASEVERDFVD-RLYGVMFIAPALKAFLPPESVVWILRNLIAPLVPRAQLPAFIDKATDDALIWADETVIKANQVDP------LRYQDRQRYATAAALVPWIQQIERSLEQVDFPFMILHDPQDQIVAYEGSELLMEVSQTAADQ---KSLRVCEGLRHDIISNDTSLVLEEAEKFIASRL 356
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A813HDC7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HDC7_POLGL) HSP 1 Score: 164 bits (414), Expect = 4.990e-41 Identity = 105/327 (32.11%), Postives = 175/327 (53.52%), Query Frame = 2
Query: 122 DFNLPKGDNFF-LNSRKQRLHLRTFLPETGVEMKALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVV-TRGTPDGERSNLGL-DPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEK-VSVPELVWLKSEHV-EMGALDKVGQP-GGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDW 1084
++ LP +FF + +RLH+R LP ++ +F+ HGY AHIN P ++ + ++A GYA+ +VD GHGYS G + +++ L + + +V T T G + G+ + + Q PFF G+S+GG L+L+ + +++ D+T + A G + PA++ + P + V++L++H V PL PS +P F+ K SVP ++ E + E D G+ GG+GW MR+ T + ++ L +S + P LVLHDP+D I F G+++L+ E S D K + +M +HD+ SN A T+W
Sbjct: 58 NYTLPPTTHFFTFEAGCKRLHVRNTLPAYPHLVQGSIFFVHGYGAHINRPMLNQWLQRLAAAGYAIFSVDFPGHGYSPGERAYVENFEEFLSAYMEFVHLVRTTSTSKGSTFDFGVANEGLLQAARQKPFFIMGESMGGLLALVTSQRIRKDST---LAASFRGTVLMAPALKVDLPPDAVVYLIRHAVVPLMPSSIMPAFLSKSASVPVSAIIRDEKLAEKVTQDNWGEAKGGIGWRNGMRWVTANAFTLLMANLPEVMSSAEGPMLVLHDPQDLICHFGGSERLM-ELSPSTD----KTLIKMEDARHDIASNEPDTSAAHITEW 376
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Match: A0A813IDT2_POLGL (Hypothetical protein n=4 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IDT2_POLGL) HSP 1 Score: 155 bits (393), Expect = 5.190e-38 Identity = 101/328 (30.79%), Postives = 173/328 (52.74%), Query Frame = 2
Query: 122 DFNLPKGDNFF-LNSRKQRLHLRTFLPETGVEM-KALLFWYHGYAAHINGPTFREFAEGMSAGGYAVIAVDQHGHGYSDGATVLMNDYKHLLEDNIAILDVV-TRGTPDGERSNLGLDPD-IRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMANCPAIRANPPKEPVLFLLKHVVAPLFPSRQIPRFMEK-VSVPELVWLKSEHV-EMGALDKVGQP-GGLGWPGTMRFGTGSQLIDMLGELYSRLSEVDFPFLVLHDPEDGIVRFEGTQKLLDEASTPADVPRGKEVKEMLGLKHDLLSNATTQMLAAYTDW 1084
++ LP +FF + +RLH+R LP + + +F+ HGY AHIN P ++ + ++A GYA+ + D GHGYS G + D++ L + + +V T T G + G+ + + Q PFF G+S+GG L+L+ + +++ D T + A G + PA++ + P E V++L++H V PL PS +P F+ K SVP ++ E + + D G+ GGLGW MR+ T + ++ L +S + P LVLHDP+D I F G+++L++ + + + K + +M +HD+ SN + +W
Sbjct: 55 NYTLPPTPHFFSFEAGSKRLHVRNTLPACNPHLVRGSIFFLHGYGAHINHPMLHQWLQRLAAAGYAIFSFDFPGHGYSPGERAYVKDFEEFLSAYMEFVHLVRTTPTSKGSTFDFGIAIEGLLQAARQKPFFIIGESMGGLLALVTSQRVRRDIT---LAASFGGSVLLAPALKVDMPPEAVIYLIRHAVVPLMPSSIMPAFLSKSASVPISAIIRDEEMADKVQKDNWGEAKGGLGWRNGMRWVTINAFTLLMQNLPEVMSSSEGPMLVLHDPQDAIAHFGGSERLMELSPS-----KDKALIKMEDARHDIASNEPETSASHVIEW 374 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6600.17447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6600.17447.1 >prot_Ecto-sp13_S_contig6600.17447.1 ID=prot_Ecto-sp13_S_contig6600.17447.1|Name=mRNA_Ecto-sp13_S_contig6600.17447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp MSTAADEGKPKVAATTPPSSTSTRRKTALDFNLPKGDNFFLNSRKQRLHLback to top mRNA from alignment at Ecto-sp13_S_contig6600:1125..8117+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6600.17447.1 ID=mRNA_Ecto-sp13_S_contig6600.17447.1|Name=mRNA_Ecto-sp13_S_contig6600.17447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6600:1125..8117+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6600:1125..8117+ >mRNA_Ecto-sp13_S_contig6600.17447.1 ID=mRNA_Ecto-sp13_S_contig6600.17447.1|Name=mRNA_Ecto-sp13_S_contig6600.17447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6600:1125..8117+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |