mRNA_Ecto-sp13_S_contig65982.17440.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig65982.17440.1
Unique NamemRNA_Ecto-sp13_S_contig65982.17440.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: D7FHZ1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ1_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.480e-13
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 1 
Query:   19 MIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            MIEKDTMCLLDFYVHESVQRRG GL LFKSALK
Sbjct:    1 MIEKDTMCLLDFYVHESVQRRGLGLDLFKSALK 33
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A0S4IKU1_BODSA (Alpha-tubulin N-acetyltransferase n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IKU1_BODSA)

HSP 1 Score: 53.1 bits (126), Expect = 5.710e-7
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:   10 NGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALKV 120
            NGS++E D +C+LDFYVHES QR G+G  LF++ L++
Sbjct:   98 NGSLVEMDPLCVLDFYVHESEQRHGYGKVLFEAMLEL 134
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0CF38_PARTE (Alpha-tubulin N-acetyltransferase n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CF38_PARTE)

HSP 1 Score: 52.8 bits (125), Expect = 7.240e-7
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            +D NG++IE   +C+LDFYVHESVQRRG G  LF+  L+
Sbjct:  102 RDLNGAIIEIQPLCVLDFYVHESVQRRGIGKELFEEMLR 140
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A7K6DXM3_9PASS (ATAT acetyltransferase (Fragment) n=8 Tax=Passeriformes TaxID=9126 RepID=A0A7K6DXM3_9PASS)

HSP 1 Score: 51.2 bits (121), Expect = 1.090e-6
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            QD +GS +E + +C+LDFY+HES QRRG G  LF+  L+
Sbjct:    7 QDRDGSHVEVEPLCVLDFYIHESQQRRGLGRELFREMLQ 45
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A7K9NSM4_9CORV (ATAT acetyltransferase (Fragment) n=1 Tax=Edolisoma coerulescens TaxID=2585810 RepID=A0A7K9NSM4_9CORV)

HSP 1 Score: 51.2 bits (121), Expect = 1.120e-6
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            QD +GS +E + +C+LDFY+HES QRRG G  LF+  L+
Sbjct:    9 QDRDGSHVEVEPLCVLDFYIHESQQRRGLGRELFREMLQ 47
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A8J6ENT1_ELECQ (Alpha-tubulin N-acetyltransferase 1 n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6ENT1_ELECQ)

HSP 1 Score: 51.2 bits (121), Expect = 1.810e-6
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    4 DDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALKV 120
            D  GS IE + +C+LDFY+HES+QR GFG  LF   L++
Sbjct:  104 DRKGSHIEAEPLCILDFYIHESLQRHGFGKELFGFMLRI 142
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A8J6JY27_ELECQ (N-acetyltransferase domain-containing protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6JY27_ELECQ)

HSP 1 Score: 51.6 bits (122), Expect = 2.030e-6
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALKV 120
            +D  GS IE + +C+LDFY+HES+QR GFG  LF   L++
Sbjct:   47 KDRKGSHIEAEPLCILDFYIHESLQRHGFGKELFGFMLRI 86
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A7L2N5S5_9PASS (ATAT acetyltransferase (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7L2N5S5_9PASS)

HSP 1 Score: 49.7 bits (117), Expect = 2.270e-6
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            Q+ +GS +E + +C+LDFY+HES QRRG G  LF+  L+
Sbjct:   10 QERDGSHVEVEPLCVLDFYIHESQQRRGLGRELFREMLQ 48
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: A0A7L3EG20_9PASS (ATAT acetyltransferase (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7L3EG20_9PASS)

HSP 1 Score: 49.7 bits (117), Expect = 2.400e-6
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            Q+ +GS +E + +C+LDFY+HES QRRG G  LF+  L+
Sbjct:   13 QERDGSHVEVEPLCVLDFYIHESQQRRGLGRELFREMLQ 51
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BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Match: UPI001293B8C5 (alpha-tubulin N-acetyltransferase 1 n=1 Tax=Lonchura striata domestica TaxID=299123 RepID=UPI001293B8C5)

HSP 1 Score: 51.2 bits (121), Expect = 2.660e-6
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 QDDNGSMIEKDTMCLLDFYVHESVQRRGFGLHLFKSALK 117
            QD +G+ +E + +C+LDFYVHES QRRG G  LF+  L+
Sbjct:  104 QDQDGAHVEVEPLCVLDFYVHESQQRRGLGRELFREMLQ 142
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65982.17440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ1_ECTSI2.480e-1393.94N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0S4IKU1_BODSA5.710e-756.76Alpha-tubulin N-acetyltransferase n=1 Tax=Bodo sal... [more]
A0CF38_PARTE7.240e-758.97Alpha-tubulin N-acetyltransferase n=1 Tax=Parameci... [more]
A0A7K6DXM3_9PASS1.090e-653.85ATAT acetyltransferase (Fragment) n=8 Tax=Passerif... [more]
A0A7K9NSM4_9CORV1.120e-653.85ATAT acetyltransferase (Fragment) n=1 Tax=Edolisom... [more]
A0A8J6ENT1_ELECQ1.810e-653.85Alpha-tubulin N-acetyltransferase 1 n=1 Tax=Eleuth... [more]
A0A8J6JY27_ELECQ2.030e-652.50N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7L2N5S5_9PASS2.270e-651.28ATAT acetyltransferase (Fragment) n=3 Tax=Passerif... [more]
A0A7L3EG20_9PASS2.400e-651.28ATAT acetyltransferase (Fragment) n=2 Tax=Passerif... [more]
UPI001293B8C52.660e-653.85alpha-tubulin N-acetyltransferase 1 n=1 Tax=Lonchu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65982contigEcto-sp13_S_contig65982:449..574 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score66.6
Seed ortholog evalue2.7e-09
Seed eggNOG ortholog2880.D7FHZ1
Model size126
KEGG koko:K19573
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0019799,GO:0032886,GO:0033043,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0051128,GO:0051493,GO:0061733,GO:0065007,GO:0070507,GO:0071704,GO:0071929,GO:1901564
Exons1
EggNOG free text desc.alpha-tubulin acetylation
EggNOG OGsKOG4601@1,KOG4601@2759
Ec32 ortholog descriptionAcyl-CoA N-acyltransferase
Ec32 orthologEc-12_006430.1
EC2.3.1.108
Cds size108
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463908.9872525-CDS-Ecto-sp13_S_contig65982:448..5561681463908.9872525-CDS-Ecto-sp13_S_contig65982:448..556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig65982 449..556 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463909.0009763-UTR-Ecto-sp13_S_contig65982:556..5741681463909.0009763-UTR-Ecto-sp13_S_contig65982:556..574Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig65982 557..574 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65982.17440.1prot_Ecto-sp13_S_contig65982.17440.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig65982 449..556 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig65982.17440.1

>prot_Ecto-sp13_S_contig65982.17440.1 ID=prot_Ecto-sp13_S_contig65982.17440.1|Name=mRNA_Ecto-sp13_S_contig65982.17440.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
MIEKDTMCLLDFYVHESVQRRGFGLHLFKSALKVG*
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mRNA from alignment at Ecto-sp13_S_contig65982:449..574-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig65982.17440.1 ID=mRNA_Ecto-sp13_S_contig65982.17440.1|Name=mRNA_Ecto-sp13_S_contig65982.17440.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=126bp|location=Sequence derived from alignment at Ecto-sp13_S_contig65982:449..574- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGACGATAACGGATCAATGATCGAGAAGGACACCATGTGCCTCCTAGA
TTTCTATGTGCACGAGAGTGTGCAAAGGCGGGGCTTTGGCCTCCATCTAT
TCAAGTCGGCTCTGAAGGTGGGGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig65982:449..574-

>mRNA_Ecto-sp13_S_contig65982.17440.1 ID=mRNA_Ecto-sp13_S_contig65982.17440.1|Name=mRNA_Ecto-sp13_S_contig65982.17440.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig65982:449..574- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCGAGAAGGACACCATGTGCCTCCTAGATTTCTATGTGCACGAGAG
TGTGCAAAGGCGGGGCTTTGGCCTCCATCTATTCAAGTCGGCTCTGAAGG
TGGGGTAA
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