mRNA_Ecto-sp13_S_contig6597.17439.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI) HSP 1 Score: 856 bits (2212), Expect = 6.470e-311 Identity = 456/495 (92.12%), Postives = 458/495 (92.53%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXX-KEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQVGR 1482
MSSSLLERARGFHEDLEIYERGII+QLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDS+FEEAWEAGTLPGWTSGRAA XXXXXXXXX AAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKE APGHG D NANG A XXXXXXX KEERRKQLAALETKVKALLEVQTDTLESTKRQVDKK GALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ R
Sbjct: 1 MSSSLLERARGFHEDLEIYERGIIDQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSSFEEAWEAGTLPGWTSGRAAXXXXXXXXXXXXXAAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEXXXXXXXXAPGHGADPNANGPAXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKHTRTVEERDQEIQEEEQGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDAR 495
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA) HSP 1 Score: 540 bits (1390), Expect = 5.880e-186 Identity = 281/497 (56.54%), Postives = 343/497 (69.01%), Query Frame = 1
Query: 10 SLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKG--KKEGKGVSNGVAP----GHGGDA-NANG--TAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ 1473
SLLERAR FHED+E YE II++LE KP+T KERV QQHR+ANL + RS+ L IYED D SM++EVA+MRG+ + FYDR K +WSYH +P LPV GPN++ E E KV FSGEEL+GK FDLH ++ RWVN PQC DK+LDY +L L D+PE+ K R K YAG++ADL YL GFL RTQPLVD DE++ + ++ F++AWEAG + GW AA GG R LDL +H A++L LG+DRLKEAL+A+GLKCGGTL+QRA+RL +VKGKKP EID KL AKG +K S+G A G+G DA +A+G T G + R+ AA E +V+A LE +D E+T++QV+KK G LPE + D++GPIYNPLNLPLGWDGKPIP+WLYKLHGLGVE+KCEICGDFSY GRR FDRHFQE+RHAHGMRCLGIPNTKHFHDI LIQ
Sbjct: 2 SLLERARAFHEDIETYEMAIIKELEAKPKTNKERVYQQHRVANLLSQAVARSKELDAIYEDKDDSMKQEVAAMRGRDALKNFYDRAKSSWSYHARYPDLPVNTGPNIDEEKEPKVTFSGEELFGKHFDLHDLYARWVNSPQCSDKRLDYGAYLAGLAALGDVPERAK-RSKGYAGYVADLEAYLRGFLARTQPLVDADEIVKEAEAEFDKAWEAGRVKGWPRVSKAAPHKAAAP---GGGLTARHLDLSLYHAAEDLMPLGLDRLKEALEALGLKCGGTLQQRAERLMAVKGKKPSEIDPKLLAKGAGQKRNGPPSDGPAAKRQNGNGADAADASGAKTNGVPNGKSDGGDWRRSTAAAEARVRAFLEALSDVWEATRKQVEKKQTRTVEERDAEIADEEAGTLPEVGDADEEDSDDDGPIYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEFRHAHGMRCLGIPNTKHFHDITLIQ 494
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: A0A4D9DC70_9STRA (Matrin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC70_9STRA) HSP 1 Score: 399 bits (1026), Expect = 6.530e-131 Identity = 241/514 (46.89%), Postives = 307/514 (59.73%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVL-GDTD-----------SAFEEAWEAGTLPG-WTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXK--EERRKQLAALETKVKALL-EVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFN-------EXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ 1473
MS LERAR HED+E YE I+ LE KPRT KERV QQHR++NL + RS+ L IYED G+M+EE+A++RG+ +FY R+ YH HP +PV P ++ E E +V FSGEE++GK+ DL + + LPQ + DY +L L F +P +K A+A ++ +L YL F+ RTQPL++++E+L G+ D +AFE W+AG LPG W + G + +DL+ F A EL +GMDRLK L+A+G+KCGGTLE+RA RLF+ KGKK EEID KL A G G A G+G +N NG K E+ +KQ A E ++ L+ EV + +E+TK+ V+KK G LP XXXXXX GPIYNPLNLPLG+DGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHAHGMRCL IPNTKHFHDI I+
Sbjct: 1 MSGLTLERARANHEDIEAYEAAIVAILEDKPRTAKERVWQQHRVSNLIEQIQGRSKDLEGIYEDLHGTMKEELATLRGRDAFPSFYARVDHAKEYHQKHPDVPVKHHPPVQDEAEPRVCFSGEEVFGKYLDLQASHMEFYALPQTP--KWDYQTYLSRLADFSVVPAGKK--NAAWARYVHNLYNYLLSFIQRTQPLLNVEEILDGNVDGGEEGATKKAEAAFEALWQAGKLPGGWP-------VPAQGGGEEKGTENTKEVDLRGFRTAKELEVVGMDRLKAGLKALGMKCGGTLEERAARLFATKGKKKEEIDPKLLA-----GNGKKXSKAEGNGPTSNGNGQGVGTDKEGGKGGEDAKKQCARWEFRIDLLVKEVLREVVEATKKFVEKKQTRTKEETETELRQEEEGLLPGLRGEGXXXXXXXXXXXXXXGPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLKIPNTKHFHDITTIK 498
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: A0A7S2W3N3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3N3_9STRA) HSP 1 Score: 391 bits (1004), Expect = 5.750e-128 Identity = 226/501 (45.11%), Postives = 297/501 (59.28%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPE----------FNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ 1473
MSS+LLE+AR E E YE+ I EQL +KP+T K++V QQH IANL ++S E+ +D DGS +EE+ +M+G +FY+ LK+T Y+ P + +LEA+ E FSGEE++GK+ DLH + R N+ Q + Y +L A F +P K+ G AYA +L DL +YL F R QPLVD + + +AF+EAWE GT+PGW++G A AA R +D+ H A +L ALG+ RLKE L+A+G+KCGG+L RA+RLFSVKG ++I + L AK K+ K A GGD NG A +A E V ++E D +E+TKR V+K+ G + + ++ XXX ++GP+YNPLNLPLGWDGKPIP+WLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHAHGMRCLGIPNTKHFHDI LI+
Sbjct: 1 MSSTLLEQARQALEYSEAYEKAIGEQLSSKPKTTKQQVWQQHHIANLMTCIKKQSGTALEVVKDGDGSFKEELETMKGANAFGSFYESLKQTREYYMRFPNIKPQQALSLEADMECTTVFSGEEVFGKYLDLHALHERSCNMKQFGPTE--YLDYLAAFSDFSKVPSGAKM-GAAYAEYLKDLLDYLESFFQRAQPLVDFASISSERSTAFQEAWEKGTVPGWSAGSAGTEAASTSNT-----AAKRPVDMSSMHSAQDLEALGLQRLKEGLEALGMKCGGSLSDRAERLFSVKGVAQKDIPKNLLAKAAKKRKRD----AAETGGD---NGRA---------------VAEREFGVGFMVEQLLDVVEATKRHVEKRQTQLVEERAAELEEEEFGTMADQIAGEDGTGGLDDEEDXXXXDDGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIE 471
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: A0A7S2HV93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV93_9STRA) HSP 1 Score: 372 bits (956), Expect = 7.200e-121 Identity = 217/495 (43.84%), Postives = 291/495 (58.79%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQ-CKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXD---EEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ 1473
MS+SLLE+AR +E+ E YER I +QL+TKP+T K+RV QQH I NL +S+ + I++D D + ++E+ SM+G+ +FY+ L+ET YH +P L N++AE E K QFSG EL+GK+ DL R N+ + + ++YSQFL F +P + K R +Y + DL YL F+ RTQPLV L+E+ + D FE+AW+ T +G R+LDL KFH A E+ ALG+ RLK+ A+GLKCGG +RA+RL+ KG P++ K+ A K++ G S+ D A+ + R +A E ++ L + D L++ +R VDKK GAL ++ XXXX +EGP+YNPLNLPLGWDGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHA+GMRCL IPNTKHFHDI LI+
Sbjct: 1 MSASLLEQARSSYENTEAYERTIGKQLDTKPKTNKQRVWQQHHIKNLIKHIQVQSKVVVAIHQDADETFKDELESMKGRNAFGSFYESLRETKEYHQRNPYLMPQNELNMDAEMECKAQFSGPELFGKYLDLVPFHARATNMKKHFGPEPVEYSQFLLDFHEFSKVPAELK-RAASYVSYTKDLCAYLMAFMARTQPLVSLEEMATEADEVFEKAWKD------TEAEKVETENKASNYQEG-----RLLDLTKFHSAKEIEALGLARLKDGCLALGLKCGGGAGERAERLWRTKGLTPDQYPSKILASRKRKRDGKSD--------DKEAS-------------DSRHDVARAEFRISFLCDQMADVLDAPRRYVDKKQTQLVEERDAEFAEEESGALAALDDEEXXXXXXXXDEGPLYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGNMSYWGRRAFDRHFQEWRHAYGMRCLKIPNTKHFHDITLIE 462
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: A0A067DVA8_CITSI (Matrin-type domain-containing protein n=6 Tax=Citrus TaxID=2706 RepID=A0A067DVA8_CITSI) HSP 1 Score: 353 bits (905), Expect = 3.280e-113 Identity = 210/504 (41.67%), Postives = 290/504 (57.54%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQ-----KVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVK----VQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGW-TSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQVGR 1482
MSS+LLE R HE++E ER +++ L+T+P + K+R+ Q HR+ N+ D T+ ++ L EIY D D + ++E+A++ GQ V +FYDRLKE YH HP V + + E +K V+FSGEE YG++ DLH ++ +++N K+++YS +L R +IP + K+ + Y ++ L EYL F RT+PL DLD + + FEE W TL GW T G+ PA LDL + +EL +G +RLKE L A GLK GGTL+QRA+RLF K +++D+K AKG + GK NGVAP + K +A +E K+K L ++ ++T+E T + V KK XXX + DEE IYNPL LP+GWDGKPIPYWLYKLHGLG EFKCEICG++SY GRR F+RHF+EWRH HGMRCLGIPNTK+F++I I+ +
Sbjct: 1 MSSTLLEVTRAAHEEVERLERLVVKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLKEEPLVEFSGEEAYGRYLDLHELYNQYINSKF--GKEIEYSAYLDVFSRPHEIPRKLKMT-RQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQENGHV----------PAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGAR-GK-EQNGVAP-----------------ATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALTYEEMEAEREEXXXXXXXXXD-------DEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAK 465
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: D5ABE2_PICSI (Matrin-type domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ABE2_PICSI) HSP 1 Score: 348 bits (893), Expect = 1.890e-111 Identity = 217/503 (43.14%), Postives = 289/503 (57.46%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASM-----RGQKVMDTFYDRLKETWSYHTHHPGLPVTF--GPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQL-DYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPR-VLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQVGR 1482
MSS+LLE RG HE++E ER I++ L+ +P T KER+ Q HR+ N+ D +Q L E+YED+D S ++E+A++ GQ V FYDRLKE YH HP V P + E +V+FSGEE +G++ D+H ++ +VN K QL DY+ FL+ + +IP KL + Y + L EYL F RTQPL DLD++ ++ FEE W G + GW G P+ + +DL + DEL LG ++LK+AL A+GLK GGT++QRA+RLF K EE+D+K AKG + +A + K++A +E K+K L+E +TLE TK V+KK XXXXXX XXXX E+ IYNPL LP+GWDGKPIPYWLYKLHGLG EFKCEICG+ SY GRR F+RHF+EWRH HGMRCLGIPNTK+F++I I+ +
Sbjct: 1 MSSTLLEVTRGAHEEVERLERLIVKDLQREPETNKERMHQNHRVRNMVDAIMSTTQKLIEVYEDSDHSRKDEIAALGGQGVSGQNVFSAFYDRLKEIREYHRRHPIARVVDLEDPEELLKEEPRVEFSGEEAFGRYLDMHELYNEYVN---SKFGQLIDYAAFLEEFPQTHNIPRTHKLT-RQYKEYSRHLLEYLVSFFQRTQPLQDLDKIFSKVEAEFEEHWAGGMVQGWED----------KGLGNGQPSTIQDFIDLDYYSSVDELVELGPEKLKQALAALGLKTGGTVQQRAERLFLTKVTPLEELDRKHFAKGSRP--------------------SARRTDDEILQLTASKEVALMEVKMKRLVEFLHETLEETKANVEKKQALTYEEMEAEXXXXXXXXX-------XXXXXEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAK 462
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI) HSP 1 Score: 343 bits (881), Expect = 3.960e-111 Identity = 179/388 (46.13%), Postives = 231/388 (59.54%), Query Frame = 1
Query: 310 VTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ 1473
+ P E EV V FSGEE++GK+ DLH +V++ NLP +DY Q+L F IPE K KAY +++ L EYL F R QPLV+++++L + +AFE+ W G + GW R K G + L L F+ DEL ALG+DRLK A++A+GLKCGGTL RADRL+SV+G KP +I KLKAK K+ G ++G + RK+ A LE +++L + + + +T+R +K+ G LP+ E D+EGP+YNPLNLPLGWDGKPIP+WLYKLHGLGVEFKCEICG+ SY GRR FDRHFQEWRHAHGMRCLG+PNTKHFHDI LI+
Sbjct: 1 MDINPEESMEVEVHVAFSGEEIFGKYLDLHSFYVQYCNLPNIPSHDVDYLQYLDKFNSFFYIPENSKSH-KAYVQYISSLWEYLLDFFRRVQPLVEVEDLLAEWRAAFEKKWSVGDVSGWAPPR------------KSGGGDSQALRLGMFNSKDELEALGLDRLKGAMEALGLKCGGTLSDRADRLWSVRGVKPNDIPDKLKAKAKRAGSADNSG------------------------DSARKKTALLEYLIQSLCSLMAEIVTATRRHAEKQQTRTLEEKLALLEEEEYGTLPDVEEADDDE-DDEGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEFKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGVPNTKHFHDITLIE 350
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: UPI001263D485 (splicing factor SF3a60 homolog isoform X1 n=5 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263D485) HSP 1 Score: 347 bits (890), Expect = 5.830e-111 Identity = 212/505 (41.98%), Postives = 296/505 (58.61%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQ-----KVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVK----VQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGG--PAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQVGR 1482
MSS+LLE R HE++E ER +++ L+T+P + K R+ Q HR+ N+ D T ++ L EIYED D + ++E+A++ GQ V FYDRLKE YH HP V N E E +K ++FSGEE +G+F DLH +F +++N + ++YS +L + IP + K+ + Y ++ +L EYL F RT+PL DLD + ++ FEE W G +PGW + + G P+ V+DL + +EL +G ++LKEAL A+GLK GGT++QRA+RLF K E++D+K AKG + + NGVA + K +A +E K++ L ++ +T+E TK+ V+KK XXXX XXXXXDEE IYNPL LP+GWDGKPIPYWLYKLHGLG EFKCEICG++SY GRR F+RHF+EWRH HGMRCLGIPNTK+F++I I+ +
Sbjct: 1 MSSTLLEVTRAAHEEVERLERLVVKDLQTEPTSNKGRLFQTHRVRNMIDTITATTEKLVEIYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVV-DANEEYENLLKEEPLIEFSGEEAFGRFLDLHELFNQYINSKF--GEHIEYSAYLDVFSQPLKIPRKMKMT-RQYREYMENLLEYLIYFFQRTEPLQDLDRIFSKVEADFEEQWANGMIPGWDN-----------EDQENGHVPSEHTVIDLDYYSTVEELMEVGPEKLKEALAALGLKSGGTVQQRAERLFLTKHTPLEKLDKKHFAKGSRGPE--KNGVAA-----------------PPQEVGNLKDIALMEAKMQKLCDLLEETIERTKQNVEKKQALTYEEMEAEREXXXXXXX------XXXXXDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAK 465
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Match: UPI001FB113B8 (splicing factor SF3a60 homolog n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB113B8) HSP 1 Score: 346 bits (888), Expect = 1.130e-110 Identity = 207/502 (41.24%), Postives = 279/502 (55.58%), Query Frame = 1
Query: 1 MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQ-----KVMDTFYDRLKETWSYHTHHPG-LPVTFGPNLEA--ETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSAFEEAWEAGTLPGWTSGRAAAXXXXXXXXXKGGPAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEGKGVSNGVAPGHGGDANANGTAGXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKXXXXXXXXXXXXXXXXXGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQVGR 1482
MSS+LLE R HE++E ER +++ L+T P T K+R+ Q R+ N+ D +E + L EIYED D S ++E+ ++ GQ + FYDRLKE YH HPG L V EA + E ++F+GEE +G++ D+H ++ ++N + ++Y+ +L R IP ++K R + Y +L L EYL F RT+PL DLD + S FEE W G + GW PA LDL + +EL +G DRLKEAL A+GLK GGT++QRA RLF K E++D+K AKG H + N + T ++E K++A LE KV L ++ DT+ TK + KK XXX + DEE IYNPL LP+GWDGKPIPYWLYKLHGLG EFKCEICG+ SY GRR ++RHF+EWRH HGMRCLGIPNTK+F++I I+ R
Sbjct: 1 MSSTLLELTRSGHEEVERLERLVVQHLQTDPATSKDRLYQSLRVRNMIDQISETTLKLVEIYEDKDSSRKDEIGALGGQTATGTNIFSAFYDRLKEIRDYHRRHPGALVVDINEEHEALLKEEPHIEFTGEEAFGRYLDMHELYNEYINSKF--GEPIEYAAYLDIFSRPHKIPRKQK-RTQQYKEYLQKLLEYLVYFFVRTEPLQDLDRIFSKVTSEFEEQWNHGKVEGWEE---------EGQENGNVPAELTALDLDYYSSVEELLEIGQDRLKEALAALGLKTGGTVQQRAKRLFLTKHTPLEKLDKKHFAKGS-------------HASERNGSSTV------LHQDEYAKEVALLEAKVIKLCDLLDDTIVGTKENIVKKQALTFEEMEAEREEXXXXXXXXSD-------DEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAR 464 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6597.17439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6597.17439.1 >prot_Ecto-sp13_S_contig6597.17439.1 ID=prot_Ecto-sp13_S_contig6597.17439.1|Name=mRNA_Ecto-sp13_S_contig6597.17439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=494bp MSSSLLERARGFHEDLEIYERGIIEQLETKPRTQKERVAQQHRIANLCDGback to top mRNA from alignment at Ecto-sp13_S_contig6597:1404..8093+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6597.17439.1 ID=mRNA_Ecto-sp13_S_contig6597.17439.1|Name=mRNA_Ecto-sp13_S_contig6597.17439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6690bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6597:1404..8093+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6597:1404..8093+ >mRNA_Ecto-sp13_S_contig6597.17439.1 ID=mRNA_Ecto-sp13_S_contig6597.17439.1|Name=mRNA_Ecto-sp13_S_contig6597.17439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1482bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6597:1404..8093+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |