mRNA_Ecto-sp13_S_contig6558.17384.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: D8LJD7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD7_ECTSI) HSP 1 Score: 243 bits (619), Expect = 2.220e-73 Identity = 138/169 (81.66%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 34 MDEVVRLKSRFVSSRPGEDSSAALTGPDASAARLVEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATIAR 540
MDEVVRLKSRFVSSRPGEDSS A TGPDASAARLVEG+LRRKSFYFQQRTGKLDMRAIGRVDI SVVKDVD+DTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLE DRALKREIRQKRATIAR
Sbjct: 1 MDEVVRLKSRFVSSRPGEDSSTAPTGPDASAARLVEGILRRKSFYFQQRTGKLDMRAIGRVDIASVVKDVDVDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLE--------------------------DRALKREIRQKRATIAR 143
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A2R5FYZ7_9STRA (Zinc finger protein DZIP1L n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYZ7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.290e-27 Identity = 65/140 (46.43%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 115 DASAARLVEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATI 534
DA + E V K+FYFQQR GKLD+R I R+D+E VV+DVDI+TLQ +LEN+TF+ + + DL +D+ FL LFR++QL +EYLL+VQ TL L + + + + D +++L SEQ ++L+RE++QKR T+
Sbjct: 51 DAERGPVKENVRPEKNFYFQQRHGKLDLRGIARLDLEQVVEDVDIETLQTYLENLTFSELEDRDLHTCTDETFLKLFRVTQLTIEYLLNVQHTLYAYTSTLEGQLAHIHKEQDLAQSKLGMQSEQLQSLQRELKQKRRTL 190
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A7S3HAZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAZ7_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.740e-26 Identity = 57/132 (43.18%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 142 GVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATIA 537
G+ + F+FQQR G LD+R+I +++E +V++VD+D LQ H+ENITF ++ E+DLR +D + LFR+SQL+LEYLL QD L +L L+ K+S +R L + R EL E + L+ +++ K+ IA
Sbjct: 55 GLFGSEGFFFQQRRGHLDLRSIAAINLEKLVREVDVDVLQIHIENITFCNLREEDLRYLTDPQIVKLFRISQLMLEYLLYSQDKLVDNLNHLSHKYSEKKRGLSKKRRELVELEESTKLLRNQVKAKKQNIA 186
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A7S2S367_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S367_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.340e-25 Identity = 61/140 (43.57%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 115 DASAARLVEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATI 534
D L ++ +KSFYFQQR GK+D+RAI RVD+E++V+ VDI+TLQ HLENITF+ + + D++ Y+D F+ LFRL+QL +EYLL+VQ TL + L + ++ ++ +EQ +L+RE++QK+ T+
Sbjct: 77 DKENVGLNARIVPQKSFYFQQRHGKIDLRAISRVDLEALVEQVDIETLQTHLENITFSELDDADMKTYTDDNFMKLFRLTQLTVEYLLNVQHTLYSYATTLERQAQGIQNEQVVAEQKMDMQNEQLTSLRRELKQKKRTL 216
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A7R9YCD3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCD3_9STRA) HSP 1 Score: 107 bits (267), Expect = 6.600e-24 Identity = 65/163 (39.88%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 49 RLKSRFVSSRPGEDSSAALTGPDASAARLVEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATIA 537
RL+SR + P E ++ D + A E VL+ FYFQQR+G+LD+R + R+D+E VV++VD+DTLQ HLEN+ ++ +SE DL SD L + +LSQL +EYLL VQDTLA +++A A + ++ L A + + ++ E++Q R ++A
Sbjct: 5 RLRSRLSHATPIEHAA------DRNWA-FAEPVLKGDGFYFQQRSGRLDLRRLSRIDLERVVREVDVDTLQMHLENLCYSDISEGDLAFASDAQVLQVLKLSQLTVEYLLHVQDTLAENVDAAAHEARGLKEELHASEQRKIAQDSKIQRVEMEVKQLRRSVA 160
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: B8BW77_THAPS (Ubiquitin-like domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW77_THAPS) HSP 1 Score: 107 bits (267), Expect = 9.530e-24 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 112 PDASAARLVEGVLRRKSFYFQQRTG--KLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLD 453
P S E +L +K F F R G ++D+R I RVDI +VK+VDIDTLQ+ LE IT+A ++EDD LYS+ CF+ LF++SQL LEYLL VQDTL+ +L LA K+++ +R ++
Sbjct: 18 PRTSEPTYAETLLYQKGFQFTARYGEDRIDLRDISRVDIHRIVKEVDIDTLQSFLEIITYADITEDDFDLYSNDCFVKLFQVSQLTLEYLLDVQDTLSANLNGLAKKYAAKKREME 133
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: K3XA98_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA98_GLOUD) HSP 1 Score: 101 bits (252), Expect = 1.080e-21 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 112 PDASAARLVEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATIA 537
P A+ AR V L +SF F+QR GKLD+RAI R+D+E +V DID +Q HLEN+ FA V+ +D++ YSD FL LF+++QL LEYLL+VQD+L T E + + ALK++IRQK+ T+A
Sbjct: 115 PVAADARQVW--LPTRSFSFRQRAGKLDVRAIARLDLEKIVATTDIDAIQRHLENLAFADVTLEDVQRYSDAYFLKLFQIAQLTLEYLLNVQDSLVTHSEDMEXXXXXXXXXXXXXXXXXXXXEAEIAALKKDIRQKQRTLA 254
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A482SWY9_9ARCH (Dzip-like_N domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWY9_9ARCH) HSP 1 Score: 97.1 bits (240), Expect = 7.890e-21 Identity = 49/133 (36.84%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 136 VEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATI 534
V+ + K F+F+QR G+ ++R + +++++ +V++VDI TLQ HLE++TF+ +EDDL+ Y+D+ + LFRL+QL +EYLL Q L +++ L+ K++ +++L R R EL E+ +L +++ KR +
Sbjct: 25 VDNIYEEKGFFFRQRRGRFNLRKLDQIELDRLVREVDIQTLQEHLEDLTFSIFNEDDLQFYTDRQVVKLFRLAQLTIEYLLYSQTQLVSNMHELSKKYAVKKKTLHRKRRELVGLKEEVTSLYGQLKAKRRNL 157
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A024UCD6_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCD6_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.690e-20 Identity = 60/152 (39.47%), Postives = 91/152 (59.87%), Query Frame = 1
Query: 82 GEDSSAALTGPDASAARLVEGVLRRKSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATIA 537
G +SAA+TG L +SF F+QR GKLD RAI ++D+ VV++ DIDT+Q LEN+ F+ ++ D YSD+ FL LF+++QL +EYLL+VQ++L E L + ++ E + + R LK+EI+QK+ TI+
Sbjct: 62 GRRTSAAVTGTTNRTINLPA-----RSFSFRQRRGKLDTRAIAQIDLNRVVRETDIDTIQNQLENLAFSDITLQDFNQYSDEYFLKLFQIAQLTVEYLLNVQESLVVHAEELESQCDQIQHECAVLAEENESVDAELRHLKQEIKQKQNTIS 208
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Match: A0A662Y2L0_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2L0_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.180e-20 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1
Query: 112 PDASAARLVEGVLRR-----KSFYFQQRTGKLDMRAIGRVDIESVVKDVDIDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLEALALKHSSVRRSLDRGRAELHAASEQDRALKREIRQKRATIA 537
P+A + G+ R+ + F F+QR GKLD RAI R+D+E + DI+++Q HLEN+ FA V+ DD++ YSD FL LF+++QL LEYL+ VQD+L E L + + +LKREIRQK+ T+A
Sbjct: 103 PEAGREKPPTGLRRQMWLPTRQFAFRQRAGKLDTRAIARLDLEKIAATTDIESIQKHLENLAFADVTMDDVQQYSDAYFLKLFQIAQLTLEYLMHVQDSLVDHSEGLETQCDQLXXXXXXXXXXXXXXXXXXSSLKREIRQKQRTMA 249 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6558.17384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6558.17384.1 >prot_Ecto-sp13_S_contig6558.17384.1 ID=prot_Ecto-sp13_S_contig6558.17384.1|Name=mRNA_Ecto-sp13_S_contig6558.17384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp QDTVQHNRHHAMDEVVRLKSRFVSSRPGEDSSAALTGPDASAARLVEGVLback to top mRNA from alignment at Ecto-sp13_S_contig6558:3411..7820+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6558.17384.1 ID=mRNA_Ecto-sp13_S_contig6558.17384.1|Name=mRNA_Ecto-sp13_S_contig6558.17384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6558:3411..7820+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6558:3411..7820+ >mRNA_Ecto-sp13_S_contig6558.17384.1 ID=mRNA_Ecto-sp13_S_contig6558.17384.1|Name=mRNA_Ecto-sp13_S_contig6558.17384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6558:3411..7820+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |