mRNA_Ecto-sp13_S_contig6553.17378.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6553.17378.1
Unique NamemRNA_Ecto-sp13_S_contig6553.17378.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: D7G0H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H8_ECTSI)

HSP 1 Score: 603 bits (1554), Expect = 2.980e-215
Identity = 312/345 (90.43%), Postives = 318/345 (92.17%), Query Frame = 1
Query:   70 MNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEAGADPKASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEHGRPSQEEESFNFAGLSTVTNLGGGTLMGMRDGGVTMSTTQVTTSDGTVNVS 1104
            MNPRELVN+REEQGFTALHIAVMMGA DCARKLL+AGADPKASTPEGATPI MAAQGTG+PGAPELQEGG              QTERD+VVGTVPLHTA+YSGRLEVF TLLAGPGGEVAVNTKDSQGATPLHSACRA GA GPVAAMALL+EGCPVAVDVSVRDDSGRTPLFDAAHHGH EVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLEL NNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEHGRPSQEEESFNF GLS VTNLGGGTLMGMRDGGV MSTTQ TT DGTV VS
Sbjct:    1 MNPRELVNRREEQGFTALHIAVMMGAADCARKLLDAGADPKASTPEGATPITMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDKVVGTVPLHTAVYSGRLEVFNTLLAGPGGEVAVNTKDSQGATPLHSACRAKGAAGPVAAMALLEEGCPVAVDVSVRDDSGRTPLFDAAHHGHAEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELTNNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEHGRPSQEEESFNFDGLSMVTNLGGGTLMGMRDGGVNMSTTQETTPDGTVEVS 345          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A6H5KW25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW25_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 5.300e-38
Identity = 75/84 (89.29%), Postives = 77/84 (91.67%), Query Frame = 1
Query:  625 KLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDL 876
            +LLLAAGSDPSLQDSSGLS +SAT WLGKEACLD ILGTERGL TLEL NNLGATPLIFACQENNK IAK LIAAGASLDAKDL
Sbjct:    6 QLLLAAGSDPSLQDSSGLSSVSATTWLGKEACLDPILGTERGLTTLELTNNLGATPLIFACQENNKGIAK-LIAAGASLDAKDL 88          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A818KRB4_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818KRB4_9BILA)

HSP 1 Score: 97.1 bits (240), Expect = 1.430e-18
Identity = 88/313 (28.12%), Postives = 143/313 (45.69%), Query Frame = 1
Query:   10 LVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEA-GADPKASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTE 945
            L +AC + + E++  L++   N    +N+  EQG TALH        DCAR LLE   +       EG + + +A               G    V++  + GAD T  D  + ++ +H     G L++F  L+     E  V+T D  GA P+H A +  G   P  ++A+L +     VDV+  D+  RTP   AA     + +++L  AG++P   D   L+ L   A  G  +C+  ++  E    ++E  +  G TPL +A    + +  + L+   A+ + KD  G+TP   A  +    CLK L E
Sbjct:    6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNVDVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A821BSN6_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821BSN6_9BILA)

HSP 1 Score: 97.1 bits (240), Expect = 4.070e-18
Identity = 88/313 (28.12%), Postives = 143/313 (45.69%), Query Frame = 1
Query:   10 LVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEA-GADPKASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTE 945
            L +AC + + E++  L++   N    +N+  EQG TALH        DCAR LLE   +       EG + + +A               G    V++  + GAD T  D  + ++ +H     G L++F  L+     E  V+T D  GA P+H A +  G   P  ++A+L +     VDV+  D+  RTP   AA     + +++L  AG++P   D   L+ L   A  G  +C+  ++  E    ++E  +  G TPL +A    + +  + L+   A+ + KD  G+TP   A  +    CLK L E
Sbjct:    6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNVDVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A819CPQ1_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819CPQ1_9BILA)

HSP 1 Score: 95.5 bits (236), Expect = 1.520e-17
Identity = 87/313 (27.80%), Postives = 142/313 (45.37%), Query Frame = 1
Query:   10 LVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEA-GADPKASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTE 945
            L +AC + + E++  L++   N    +N+  EQG TALH        DCAR LLE   +       EG + + +A               G    V++  + GAD T  D  + ++ +H     G L++F  L+     E  V+T D  GA P+H A +  G   P  ++A+L +      DV+  D+  RTP   AA     + +++L  AG++P   D   L+ L   A  G  +C+  ++  E    ++E  +  G TPL +A    + +  + L+   A+ + KD  G+TP   A  +    CLK L E
Sbjct:    6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNADVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A818QJB4_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A818QJB4_9BILA)

HSP 1 Score: 94.0 bits (232), Expect = 1.580e-17
Identity = 85/315 (26.98%), Postives = 142/315 (45.08%), Query Frame = 1
Query:   10 LVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEAGADP-KASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEH 951
            L +AC + + E++  L++   N    +NK  EQG TALH        DCAR LLE           EG + + +A               G    V++  + GAD T  D  + ++ +H     G +++F  L+     +  ++T D  GA P+H A +  G   P+  + +L +      DV+  D+  RTP   AA     + +++L  AG++P   D   L+ L   A  G  +C+  ++  E    +LE  +  G TPL +A    + ++ + L+   A+ + KD  G+TP   A  +    CLK L E +
Sbjct:    3 LFEACQKVDIEQVKYLIEQNFN----INKLNEQGRTALHYCCDHENIDCARLLLENDKSIINIKDNEGFSALHLACLN------------GNLIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHVDLFDILVQY---QTPIHTSDIYGAFPIHYASQLCGNNDPIKNLTILKKLIDNNADVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHADKDSLTALHCAATCGHLSCIRMLI--ELYGCSLESEDINGCTPLYYAITFEHLNVCRVLLHLKANPNHKDHRGRTPSHCAALKGNINCLKCLIEHN 295          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A816A672_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A816A672_9BILA)

HSP 1 Score: 95.5 bits (236), Expect = 1.680e-17
Identity = 87/313 (27.80%), Postives = 142/313 (45.37%), Query Frame = 1
Query:   10 LVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEA-GADPKASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTE 945
            L +AC + + E++  L++   N    +N+  EQG TALH        DCAR LLE   +       EG + + +A               G    V++  + GAD T  D  + ++ +H     G L++F  L+     E  V+T D  GA P+H A +  G   P  ++A+L +      DV+  D+  RTP   AA     + +++L  AG++P   D   L+ L   A  G  +C+  ++  E    ++E  +  G TPL +A    + +  + L+   A+ + KD  G+TP   A  +    CLK L E
Sbjct:    6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNADVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A814WKQ2_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814WKQ2_ADIRI)

HSP 1 Score: 87.0 bits (214), Expect = 8.000e-15
Identity = 88/325 (27.08%), Postives = 141/325 (43.38%), Query Frame = 1
Query:    1 MQRLVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEAGADPKASTP----EGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNL------GATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTE 945
            M  L +AC + + ER+ SL++   +  ++    ++QG T LH         CA+ +L+  +  K        EG + + +A               G    V++L + GA+    D    TV +H     G L +F  L+        V+T D  GA P+H A +  G  G +  +A+L +     VDV+  D+  RTP   AA  G  + ++LL  AG++P   D   L+ L   A  G   C+  ++  E     LE   N       G T L +A    + D+ + L+   A+ + +D  G+TP   A A+    CLK L E
Sbjct:    1 MMSLFEACQQADVERIKSLIEQQCDLTQI----DDQGRTVLHYCNDHTDIACAQLILQDESVRKLILDRHDNEGCSALHLACLN------------GNMVMVKYLCEQGANVQLVDYESHTV-IHWITVCGHLHLFNILMKYGA---PVHTPDVYGAFPIHYASQLCGKDGAIEGLAILKKLIDNNVDVNCVDEHKRTPFIWAASAGAVDALRLLYKAGANPQHVDKDALTALHGVATRGHANCVRILV--ELYECPLEAKKNRLGEDINGCTALFYATSFQHVDVCRLLLDLKANPNHQDKRGRTPSHCAAAKGNLECLKYLIE 303          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A817SJ67_9BILA (Hypothetical protein n=5 Tax=Rotaria TaxID=231623 RepID=A0A817SJ67_9BILA)

HSP 1 Score: 84.0 bits (206), Expect = 8.270e-14
Identity = 84/322 (26.09%), Postives = 141/322 (43.79%), Query Frame = 1
Query:    1 MQRLVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEAGADPKA----STPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEHG 954
            M  L  AC +G+ E++  L++   +    +++  E+G TALH        DCA+ LLE  +   +       EG + + +A               G A  V++L +   D    D    ++  H     G +++F  L+     +  ++T D  GA P+H A +  G   PV  +A+L++      DV   D+  RTP   AA    T+ ++ L  AG++P   D   L+ L   A  G  +C+  ++  E     LE  +  G T L +A    + +  + L+   A+ + KD  G+TP   A  +    CLK L E +G
Sbjct:    1 MSFLFDACQKGDVEQVKFLIERQCD----IDQVTEEGRTALHYCCEHETIDCAKILLENESIKNSIINRQDNEGFSALHLACLN------------GNAVMVKYLCEQQGDVKLVDYESHSI-FHWVTVCGHIDLFDILVQY---QAPIHTCDIYGAFPIHYASQLCGNKEPVKRLAILNKIIDNNADVDCLDEQKRTPFLWAASANATDALRTLYKAGANPLHADKDSLTALHCAATCGHISCIRMLV--ELYGCPLESEDVNGCTALFYAITLEHSNACRILLDLKANPNHKDNRGRTPSHCAALKGNIDCLKFLIEYNG 300          
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Match: A0A818J7F6_9BILA (Hypothetical protein n=10 Tax=Rotaria TaxID=231623 RepID=A0A818J7F6_9BILA)

HSP 1 Score: 84.0 bits (206), Expect = 1.050e-13
Identity = 84/322 (26.09%), Postives = 141/322 (43.79%), Query Frame = 1
Query:    1 MQRLVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAPDCARKLLEAGADPKA----STPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQFLLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDSQGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAAHHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEHG 954
            M  L  AC +G+ E++  L++   +    +++  E+G TALH        DCA+ LLE  +   +       EG + + +A               G A  V++L +   D    D    ++  H     G +++F  L+     +  ++T D  GA P+H A +  G   PV  +A+L++      DV   D+  RTP   AA    T+ ++ L  AG++P   D   L+ L   A  G  +C+  ++  E     LE  +  G T L +A    + +  + L+   A+ + KD  G+TP   A  +    CLK L E +G
Sbjct:    1 MSFLFDACQKGDVEQVKFLIERQCD----IDQVTEEGRTALHYCCEHETIDCAKILLENESIKNSIINRQDNEGFSALHLACLN------------GNAVMVKYLCEQQGDVKLVDYESHSI-FHWVTVCGHIDLFDILVQY---QAPIHTCDIYGAFPIHYASQLCGNKEPVKRLAILNKIIDNNADVDCLDEQKRTPFLWAASANATDALRTLYKAGANPLHADKDSLTALHCAATCGHISCIRMLV--ELYGCPLESEDVNGCTALFYAITLEHSNACRILLDLKANPNHKDNRGRTPSHCAALKGNIDCLKFLIEYNG 300          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6553.17378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0H8_ECTSI2.980e-21590.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW25_9PHAE5.300e-3889.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A818KRB4_9BILA1.430e-1828.12Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A821BSN6_9BILA4.070e-1828.12Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 ... [more]
A0A819CPQ1_9BILA1.520e-1727.80Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
A0A818QJB4_9BILA1.580e-1726.98Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A816A672_9BILA1.680e-1727.80Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
A0A814WKQ2_ADIRI8.000e-1527.08Hypothetical protein n=3 Tax=Adineta ricciae TaxID... [more]
A0A817SJ67_9BILA8.270e-1426.09Hypothetical protein n=5 Tax=Rotaria TaxID=231623 ... [more]
A0A818J7F6_9BILA1.050e-1326.09Hypothetical protein n=10 Tax=Rotaria TaxID=231623... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6553contigEcto-sp13_S_contig6553:3491..6572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score604.4
Seed ortholog evalue3.8e-170
Seed eggNOG ortholog2880.D7G0H8
Model size1173
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-20_002370.1
Cds size1173
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463903.626897-CDS-Ecto-sp13_S_contig6553:3490..37881681463903.626897-CDS-Ecto-sp13_S_contig6553:3490..3788Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6553 3491..3788 -
1681463903.6403162-CDS-Ecto-sp13_S_contig6553:4336..45841681463903.6403162-CDS-Ecto-sp13_S_contig6553:4336..4584Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6553 4337..4584 -
1681463903.6520212-CDS-Ecto-sp13_S_contig6553:5361..56491681463903.6520212-CDS-Ecto-sp13_S_contig6553:5361..5649Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6553 5362..5649 -
1681463903.6634388-CDS-Ecto-sp13_S_contig6553:5969..61431681463903.6634388-CDS-Ecto-sp13_S_contig6553:5969..6143Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6553 5970..6143 -
1681463903.6736557-CDS-Ecto-sp13_S_contig6553:6407..65721681463903.6736557-CDS-Ecto-sp13_S_contig6553:6407..6572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6553 6408..6572 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6553.17378.1prot_Ecto-sp13_S_contig6553.17378.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6553 3491..6572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6553.17378.1

>prot_Ecto-sp13_S_contig6553.17378.1 ID=prot_Ecto-sp13_S_contig6553.17378.1|Name=mRNA_Ecto-sp13_S_contig6553.17378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=391bp
MQRLVQACVEGNTERLTSLLDSAMNPRELVNKREEQGFTALHIAVMMGAP
DCARKLLEAGADPKASTPEGATPIVMAAQGTGKPGAPELQEGGAAKCVQF
LLDAGADQTERDEVVGTVPLHTAIYSGRLEVFKTLLAGPGGEVAVNTKDS
QGATPLHSACRATGATGPVAAMALLDEGCPVAVDVSVRDDSGRTPLFDAA
HHGHTEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERG
LATLELANNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYII
AKAQKASACLKLLTEEHGRPSQEEESFNFAGLSTVTNLGGGTLMGMRDGG
VTMSTTQVTTSDGTVNVSMSMKKTESGTGTAAAPAPAPES*
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mRNA from alignment at Ecto-sp13_S_contig6553:3491..6572-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6553.17378.1 ID=mRNA_Ecto-sp13_S_contig6553.17378.1|Name=mRNA_Ecto-sp13_S_contig6553.17378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3082bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6553:3491..6572- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGAGGCTTGTTCAAGCATGTGTGGAAGGCAACACCGAGAGGTTGAC CTCCCTGCTAGACAGCGCGATGAATCCTCGGGAGTTGGTGAACAAGAGAG AGGAACAGGGGTTTACTGCCCTTCACATCGCCGTGATGATGGGCGCGCCG GATTGTGCCAGAAAAGTGAGGACTCATGTATTTCCCCTCTGCTTTCTCCA TTGGCACATGCTTCGCATAAAGGTTGTATATCCTGAAACATTGATTGTAT TGAGCACCCCCAATGTGCCTGCCTTTCTTAGGTCGCGCGGAGCTGGCTTG ACCCTTCTGAGCCTCCCCTTAACTCCTCCCATGTTGTGTCGTTGCTGCTT CCGTTGCTTACTCTTAACGCGTCTTTTTTCTCTTTCGCGTCTTTTTCACG GCCACTCCGGGCTCCCGGGCGACAACCAGCTCCTCGAAGCTGGCGCAGAC CCCAAAGCTTCCACTCCGGAAGGTGCCACCCCGATCGTCATGGCTGCCCA GGGAACCGGGAAACCGGGCGCGCCCGAGCTGCAGGAGGGCGGCGCTGCCA AGTGTGTCCAGTTCCTCCTAGACGCCGGCGCGGATCAAACGGAGAGGGAC GAGGTGAGTCCGGCCGGCGTGCAGCGGTCGGTTCCCGACTCCAATTAGTA GAGGGAGAGAGTGCGAAGGGACTGCTACGCTTGTTTCTCAAATATTTTAA AGCAAACTTGTGCTGTCCACGCCTGGTTCGTCTCATGTAAGGGGGAGTAC GACGGCTCCTTCTCTCGTCGTGTCGCACTTCCAATGCCATCGGTTGTTAG GGGAGGGGTTCATCCCTCAAAATATGTACTCCATGCTGACGAGTTTTTGC CGTGAACATCAAACTAAACGTGGCCCTTGCCTTCATTTTTTCTTGGGCAA CGTGGGGGCGGGCGGGTATCCAGGTGGTCGGCACGGTGCCGCTGCACACG GCCATCTACTCAGGGCGGCTAGAGGTGTTCAAGACCCTGCTGGCCGGACC GGGCGGGGAGGTCGCCGTCAATACCAAGGACAGTCAAGGCGCGACGCCCC TCCACAGCGCCTGCAGGGCAACGGGTGCCACTGGGCCCGTGGCCGCCATG GCCCTGCTCGACGAAGGCTGTCCGGTGGCGGTGGATGTCAGCGTCAGGGA CGACTCCGGGAGGACGCCTCTGTTTGATGCTGCTCACCACGGTCACACCG AGGTGGTCAAGGTTTGTGTGAGGGAGGAGCTTGGCGATAAAAAAAGCAGC CGTGAACGTAAGCGCGCGAGCGTAAGCGGATCACGCCATCGGAGAGCGCG AGAAGACACCAGTGAAGCTTGATGCTTGGTGTGTGATGCTATTGACACCG GCCCCTTGTGGGAAAGTGAGCCCGCCGGCACGAAGGTTTTGGCCCGATAT AACGTAGATTAGAAAATGGCAAGATACTCCGTGCACATATCACATGGCGC GTCGGTGTGGAGACCACCTTCATAAAGGTAGAAACTCCCCAGTGTCTGTC GAGGACGATTCCCTCTTTTGACAATGGCGTCGGCGTGAGATGTCAGAGTG TCTGCTTTAGGTTGCAAAAGATACGGTTTCTACACCCGCTATCACTTGAT TTTCTGCTGGAAAACGGAAAAAGAAAAACGGTGGGTGGGCCAAGGAAGGA TGCACTGTTCATCGAACTCGGAACTTCTGATGATGACGTGGCGGACGTAG CGAAGCCGTGAAGAACGTGCATCGCCCCGCCGCCAGCCGGTCGGGTTCCG GTCAACCCAAGAAGACTCCTCTTTCCTGGGAAACAAGCAAAAGTCTCGAA AAAAGGGGGGGGTAATGTGGAGACCACATTCATAAGGGTAGAAACTCCGT AACGTCAGTCGAGGACGATTCTCTCTTTTCACATCGGGGTGGTTTGTGAC GATGTCCTCGCAGCTGTTGTGTGTACTGGGTGCTCAGGCTGACCCACCTC TTGTGTTCCGTACACCGCAAATGCCCATGCACCGTCAGCTCCTTCTAGCT GCTGGGTCCGACCCATCTTTGCAAGACAGCAGCGGTCTGAGCCCCCTTTC GGCAACGGCCTGGTTGGGCAAGGAGGCTTGTCTGGACGCCATTCTCGGCA CCGAGCGCGGCCTGGCCACCCTCGAGCTGGCCAACAACCTGGGCGCCACG CCCCTCATCTTCGCCTGCCAGGAAAACAACAAGGACATCGCGAAGAAGCT CATTGCCGCTGGAGCGAGCCTCGACGCGAAAGACTTGTGAGCTCTGCTGT GTGTACTAGATCTCCCCGCCACCGGGTTGTGGGAAAATCGAGTGCATGCG CTGTGTTGTCGTTCTTGTTGTTGTTTCTTTCAGCAGAGGACTTGATTGAC GTGTGGTGATTGTGGATTTTCTTCGTAAACTCTTTCGAGCGTTGCAGTTT CGACAAGGTAGTTGGCGACGGAATAATTAGAGAGTAGGTGTGAGGAAACT CGTCGATATCGATCGTCTCCTCGGCGCGTTTTCTTGCTGCTTGCTGTTTT CCTTGTTGCGGTCCGCATCGGCTGTGAAACTAGCTTGGGAGGTGGAGGGT CACCGAATACCGGGCGGATATAGGATCATGAATTTTTATCCTGCCACTGT TCGACCTTCAGCAGTATCTCTTGAGCGTTTCGTACTACTTCTCTTCATCT ATCCATGACGCACTTGCTCTTTTTTCGTGCGATGATGATCGGTCTACATA CCAGTACGCATGTGTCGGCAAAACTTGAGCACGAGGCCCTCCCCCCTCCC CCCTCCCCCCTCCTCAACCCTACGCCACCACTAGGACGGGCCAGACACCG TACATCATCGCCAAGGCTCAGAAAGCGTCGGCCTGCTTGAAGCTCCTCAC CGAGGAGCACGGCCGCCCCAGCCAAGAGGAGGAGAGCTTCAACTTCGCTG GGCTTTCCACGGTTACCAACCTGGGAGGGGGCACCCTCATGGGCATGAGG GATGGTGGCGTGACCATGTCCACGACGCAGGTAACCACGTCGGATGGTAC CGTGAACGTCTCCATGTCTATGAAGAAAACTGAATCCGGAACCGGAACCG CTGCTGCTCCTGCTCCTGCTCCTGAGTCGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6553:3491..6572-

>mRNA_Ecto-sp13_S_contig6553.17378.1 ID=mRNA_Ecto-sp13_S_contig6553.17378.1|Name=mRNA_Ecto-sp13_S_contig6553.17378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1173bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6553:3491..6572- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGAGGCTTGTTCAAGCATGTGTGGAAGGCAACACCGAGAGGTTGAC
CTCCCTGCTAGACAGCGCGATGAATCCTCGGGAGTTGGTGAACAAGAGAG
AGGAACAGGGGTTTACTGCCCTTCACATCGCCGTGATGATGGGCGCGCCG
GATTGTGCCAGAAAACTCCTCGAAGCTGGCGCAGACCCCAAAGCTTCCAC
TCCGGAAGGTGCCACCCCGATCGTCATGGCTGCCCAGGGAACCGGGAAAC
CGGGCGCGCCCGAGCTGCAGGAGGGCGGCGCTGCCAAGTGTGTCCAGTTC
CTCCTAGACGCCGGCGCGGATCAAACGGAGAGGGACGAGGTGGTCGGCAC
GGTGCCGCTGCACACGGCCATCTACTCAGGGCGGCTAGAGGTGTTCAAGA
CCCTGCTGGCCGGACCGGGCGGGGAGGTCGCCGTCAATACCAAGGACAGT
CAAGGCGCGACGCCCCTCCACAGCGCCTGCAGGGCAACGGGTGCCACTGG
GCCCGTGGCCGCCATGGCCCTGCTCGACGAAGGCTGTCCGGTGGCGGTGG
ATGTCAGCGTCAGGGACGACTCCGGGAGGACGCCTCTGTTTGATGCTGCT
CACCACGGTCACACCGAGGTGGTCAAGCTCCTTCTAGCTGCTGGGTCCGA
CCCATCTTTGCAAGACAGCAGCGGTCTGAGCCCCCTTTCGGCAACGGCCT
GGTTGGGCAAGGAGGCTTGTCTGGACGCCATTCTCGGCACCGAGCGCGGC
CTGGCCACCCTCGAGCTGGCCAACAACCTGGGCGCCACGCCCCTCATCTT
CGCCTGCCAGGAAAACAACAAGGACATCGCGAAGAAGCTCATTGCCGCTG
GAGCGAGCCTCGACGCGAAAGACTTGACGGGCCAGACACCGTACATCATC
GCCAAGGCTCAGAAAGCGTCGGCCTGCTTGAAGCTCCTCACCGAGGAGCA
CGGCCGCCCCAGCCAAGAGGAGGAGAGCTTCAACTTCGCTGGGCTTTCCA
CGGTTACCAACCTGGGAGGGGGCACCCTCATGGGCATGAGGGATGGTGGC
GTGACCATGTCCACGACGCAGGTAACCACGTCGGATGGTACCGTGAACGT
CTCCATGTCTATGAAGAAAACTGAATCCGGAACCGGAACCGCTGCTGCTC
CTGCTCCTGCTCCTGAGTCGTAG
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