mRNA_Ecto-sp13_S_contig655.17369.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: D7G976_ECTSI (Fibronectin type III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G976_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 3.900e-144 Identity = 208/227 (91.63%), Postives = 218/227 (96.04%), Query Frame = 1
Query: 1 IRADWDADDEPCQKKLSFDLWTFMKAEGSAQNPDAQRVRASCVEHQEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRIKQGGQRRRRLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYLGDAENLKDSGDLPEVEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAYGGEQ 681
+RA+WDADDEPCQKKLSF+LWTFM+AEGSAQ+PDAQRVRASCVEH+EIG+VELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATA+TFEAFCEDENIERVTRVASVLEAYPR K+ G+ RR LQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNY GDA LKDSGDLPEVEVVKEIPEG EG DEGSAMIELAYDIASGATFKFSTAYGGEQ
Sbjct: 38 LRAEWDADDEPCQKKLSFELWTFMQAEGSAQSPDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAMTFEAFCEDENIERVTRVASVLEAYPRNKRSGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDSGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGEQ 264
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: A0A6H5KTN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN7_9PHAE) HSP 1 Score: 341 bits (875), Expect = 2.930e-117 Identity = 172/189 (91.01%), Postives = 179/189 (94.71%), Query Frame = 1
Query: 1 IRADWDADDEPCQKKLSFDLWTFMKAEGSAQNPDAQRVRASCVEHQEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRIKQGGQRRRRLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYLGDAENLKDSGDLPEVEVVK 567
IRADWDADDEPCQKKLSF+LWTFMKAEGSA NPDAQRVRASCVEH+EIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVA V+EAYP K GGQ RR LQS+TS+AGQAHQVAELIDGLKNLGCTRTTGED+KLCVLSDSFNYLG A LKDSGDLPEVEV+K
Sbjct: 15 IRADWDADDEPCQKKLSFELWTFMKAEGSAHNPDAQRVRASCVEHEEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVAPVVEAYPFNKHGGQTRRHLQSSTSQAGQAHQVAELIDGLKNLGCTRTTGEDKKLCVLSDSFNYLGKAATLKDSGDLPEVEVIK 203
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: A0A1I1N3X0_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Spirosoma endophyticum TaxID=662367 RepID=A0A1I1N3X0_9BACT) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 460 TGEDQKLCVLSDSFNYLGDAENLKDSGDLP-EVEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAYGGE 678
TG K+ VLSDS+N LG A + SGDLP V+V++EI + + G+DEG AM E+ +D+A GA F++A+ G+
Sbjct: 177 TGAGNKVGVLSDSYNALGGAPDGVASGDLPPNVQVLEEIDDLTNGSDEGRAMAEIVHDVAPGADIAFNSAFNGQ 250
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: UPI00196B5695 (Ig-like domain-containing protein n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI00196B5695) HSP 1 Score: 65.5 bits (158), Expect = 1.220e-8 Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 460 TGEDQKLCVLSDSFNYLGDAENLKDSGDLPE-VEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAY 669
TG + V+SDSFNYLG +GDLP V +VKEIP G GTDEG M + Y IA GAT F++ Y
Sbjct: 185 TGAGVSVGVMSDSFNYLGGYATDISTGDLPSGVNIVKEIPSGFTGTDEGRGMAQNVYKIAPGATLSFASGY 255
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: A0A845YP49_9CYAN (S8 family serine peptidase n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YP49_9CYAN) HSP 1 Score: 61.6 bits (148), Expect = 2.030e-7 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 460 TGEDQKLCVLSDSFNYLGDAENLKDSGDLPEVEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAYGGE 678
TG + VLSDSF+ LG A + SGDLP+V V+ ++P G G+DEG AM++L DIA GA F TA+ G+
Sbjct: 121 TGAGVTVGVLSDSFDNLGGATADRLSGDLPDVNVLLDLPGG--GSDEGRAMLQLIADIAPGADLAFHTAFLGQ 191
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: A0A2T2S5Q7_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium QH_10_64_37 TaxID=1919091 RepID=A0A2T2S5Q7_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 9.510e-7 Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 379 STTSEAGQAH--QVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYLGDAENLKD---SGDLP----------EVEVVKEIPEGSEG--TDEGSAMIELAYDIASGATFKFSTAYGG 675
S SEA AH A L G T+G QK+CVLSDS+N A + + SGDLP V+V+++ +G++ TDEG AM++L +DIA GAT F TA+GG
Sbjct: 191 SVESEADSAHAADTARLNTG--------TSGNGQKVCVLSDSYNTASVATSASEDVQSGDLPGNGNPAGRTTPVDVLEDY-DGTDPSPTDEGRAMLQLIHDIAPGATLGFHTAFGG 297
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: A0A7K3NRW6_9DELT (S8 family serine peptidase n=1 Tax=Desulfovibrio sulfodismutans TaxID=63561 RepID=A0A7K3NRW6_9DELT) HSP 1 Score: 57.8 bits (138), Expect = 3.900e-6 Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 379 STTSEAGQAHQVAEL-IDGLKNLGCTRTTGEDQKLCVLSDSFNYLGDAENLKDSGDLPEVEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAYGG 675
STT+E AH + DG TG K+ V+SDS +YL NL+ +GDLP V + G G EG+AM+E+ YD+A A+ F+TA GG
Sbjct: 183 STTTEGDVAHSAPTVRTDGY--------TGAGVKIGVISDSVDYLA---NLQATGDLPATVTVLQDSPGQTG--EGTAMLEIVYDLAPSASLYFATAQGG 269
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: UPI001E3B6D44 (serine protease n=1 Tax=Ralstonia syzygii TaxID=28097 RepID=UPI001E3B6D44) HSP 1 Score: 56.2 bits (134), Expect = 1.200e-5 Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 421 LIDGLKNLGCTRTTGEDQKLCVLSDSFNYL-------------GDAENLKDS---GDLP---EVEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAYGGE 678
L +KNLG TG+ + VLSDSFN G + ++D GDLP + ++KE+P S+G+DEG AM E+ +D+A GA F TA G+
Sbjct: 164 LRQAVKNLGL-ELTGKGMTVGVLSDSFNCNSQRNQDARFVAKNGRQDTMEDDIARGDLPGNGRIRILKELPNCSDGSDEGRAMAEIIHDVAPGADIAFYTAANGQ 267
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: G3A928_9RALS (Putative serine protease protein n=6 Tax=Ralstonia TaxID=48736 RepID=G3A928_9RALS) HSP 1 Score: 56.2 bits (134), Expect = 1.310e-5 Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 421 LIDGLKNLGCTRTTGEDQKLCVLSDSFNYL-------------GDAENLKDS---GDLP---EVEVVKEIPEGSEGTDEGSAMIELAYDIASGATFKFSTAYGGE 678
L +KNLG TG+ + VLSDSFN G + ++D GDLP + ++KE+P S+G+DEG AM E+ +D+A GA F TA G+
Sbjct: 152 LRQAVKNLGL-ELTGKGMTVGVLSDSFNCNSQRNQDARFVAKNGRQDTMEDDIARGDLPGNGRIRILKELPNCSDGSDEGRAMAEIIHDVAPGADIAFYTAANGQ 255
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Match: A0A2T2SKK4_9BACT (Peptidase_S8 domain-containing protein (Fragment) n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2T2SKK4_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 1.380e-5 Identity = 42/115 (36.52%), Postives = 56/115 (48.70%), Query Frame = 1
Query: 379 STTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYLGDAENLK----DSGDLPEVEVVKEIPEG------------SEGTDEGSAMIELAYDIASGATFKFSTAYGG 675
S SEA AH ++ T G QK+C LSD++N A +SGDLP +E PEG S+G+DEG AM++L +DIA GA + TA+GG
Sbjct: 191 SVGSEADTAHATDQVRQE------TGLNGSGQKICALSDTYNQNETARTSASEDVESGDLPG----EENPEGRTTPVDVLQDGGSDGSDEGRAMLQLIHDIAPGAALGYHTAFGG 295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig655.17369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig655.17369.1 >prot_Ecto-sp13_S_contig655.17369.1 ID=prot_Ecto-sp13_S_contig655.17369.1|Name=mRNA_Ecto-sp13_S_contig655.17369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp IRADWDADDEPCQKKLSFDLWTFMKAEGSAQNPDAQRVRASCVEHQEIGLback to top mRNA from alignment at Ecto-sp13_S_contig655:551..3527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig655.17369.1 ID=mRNA_Ecto-sp13_S_contig655.17369.1|Name=mRNA_Ecto-sp13_S_contig655.17369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2977bp|location=Sequence derived from alignment at Ecto-sp13_S_contig655:551..3527+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig655:551..3527+ >mRNA_Ecto-sp13_S_contig655.17369.1 ID=mRNA_Ecto-sp13_S_contig655.17369.1|Name=mRNA_Ecto-sp13_S_contig655.17369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=681bp|location=Sequence derived from alignment at Ecto-sp13_S_contig655:551..3527+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |