mRNA_Ecto-sp13_S_contig6536.17349.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: D7FSQ5_ECTSI (Pyridoxal-dependent decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ5_ECTSI) HSP 1 Score: 624 bits (1609), Expect = 8.060e-220 Identity = 336/406 (82.76%), Postives = 347/406 (85.47%), Query Frame = 1
Query: 1 MSTSDKRRSEMSFDAVSSICNIERRTWLSGKGLAAMAAGFIGTWWFLFYAHKAVGRTRGPWIHPRISRPIHRFRGAFVWGSLFAILLMRVRKYSDGKGGDGEQPIKHSFLEELLDALRGAVPEGPRLLFLEDTLAVILVAIAARAVRQVWKILASPLAAKQAFVADHGFAVVRHLPAVARLLQKEIEKTEAHLQATLRPGKDDGETLRSLPAEGKQREE----MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
MSTSDKRRS MSF AVSSICNIERRTWLSG+GLAAMAAGF+GTWWFLF AHKAVGRTRGPWIHPRISRPIHRFRGAFVWGSLF ILLMRV +LVA+A RA+RQVW+ILASPLAAKQAFVADHGFAVVR+LPAVARLLQKE+ KTEAHLQATLRPGKDD ETLRSLPAEGKQREE MKLLA+RERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVD VTMKADVKATANAMSA TIMVYASAPSFPHGVIDPVE+LA+LATRYG
Sbjct: 1 MSTSDKRRSGMSFAAVSSICNIERRTWLSGRGLAAMAAGFVGTWWFLFCAHKAVGRTRGPWIHPRISRPIHRFRGAFVWGSLFTILLMRV----------------------------------------------VLVAVAVRALRQVWEILASPLAAKQAFVADHGFAVVRNLPAVARLLQKEVAKTEAHLQATLRPGKDDEETLRSLPAEGKQREEVIAEMKLLARRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDPVTMKADVKATANAMSANTIMVYASAPSFPHGVIDPVEELARLATRYG 360
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A6H5JHB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB1_9PHAE) HSP 1 Score: 339 bits (870), Expect = 2.370e-110 Identity = 180/191 (94.24%), Postives = 180/191 (94.24%), Query Frame = 1
Query: 658 MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRE--------RGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRE RGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVD VTMKADVKATANAMSA TIMVY SAPSFPHGVIDPVEKLAQLATRYG
Sbjct: 1 MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYREVAPPFRFLRGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDPVTMKADVKATANAMSANTIMVYTSAPSFPHGVIDPVEKLAQLATRYG 191
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: W4H5N4_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5N4_9STRA) HSP 1 Score: 224 bits (571), Expect = 7.050e-64 Identity = 124/243 (51.03%), Postives = 163/243 (67.08%), Query Frame = 1
Query: 502 GFAVVRHLPAVARLLQKEIEKTEAHLQATLRPGKDDGETLR---SLPAEGKQREE----MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYR-ERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
+++ +P +A +KEI K E ++++L+ E +LP EGK M+ +A+ E +W G SGAVY D++H + + +AY LF+ +NPLH DLWPS ++ EAEVISMTA L+GG+ VCG LTSGGTESIVLA K HRD++R + G+T PEI+AA TAHAAIDKAC + IRLIKVPVD VT + DV A +SA TI++YASAPSFP G ID VE L++LA YG
Sbjct: 120 AITILQRIPFLASKYRKEIRKMEVQIESSLQEHAKSAEEFPKQFTLPEEGKANAAVLATMQAMAKGEDKRWKDGLVSGAVYHGDDDHVALLNQAYGLFNVTNPLHADLWPSVVRMEAEVISMTASFLNGGNTDVCGALTSGGTESIVLATKTHRDWFRHDHGITRPEIIAAVTAHAAIDKACDMFGIRLIKVPVDPVTFQIDVAAVKWNISANTILIYASAPSFPQGTIDDVEALSKLAVTYG 362
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A6G0XVT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVT3_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.850e-63 Identity = 120/247 (48.58%), Postives = 169/247 (68.42%), Query Frame = 1
Query: 490 VADHGFAVVRHLPAVARLLQKEIEKTEAHLQATLRP-GKDDGETLRS--LPAEGKQREE----MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYR-ERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
V ++++ LP ++ +KEI+K + ++ +L+ K + E ++ LP EG+ E M+ + + E +W G SGAVY ++EH + +AY LF+ +NPLH DLWPS ++ EAEV+SMTA L+GG+ GVCG ++SGGTESI+LA K HRD++R E G+T PEI+AA TAHAAIDKAC ++ IRLIKVPVD VT K DV A ++A TIM+Y+SAP+FP G ID + L++LAT YG
Sbjct: 115 VGQVAISIIQRLPILSSTYRKEIQKIQVDIETSLKEHAKSEAEFPKNFALPEEGQSPEAIIKTMQAMVKGEDDRWKDGLVSGAVYHGEQEHVDLLNKAYGLFNVTNPLHADLWPSVVRMEAEVVSMTASFLNGGNTGVCGAISSGGTESIILATKTHRDWFRAEHGITKPEIIAAVTAHAAIDKACDVLGIRLIKVPVDPVTFKVDVAAVKWNITANTIMIYSSAPNFPQGTIDDITALSKLATTYG 361
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A1V9ZBZ4_9STRA (Sphingosine-1-phosphate lyase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBZ4_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.300e-63 Identity = 138/308 (44.81%), Postives = 190/308 (61.69%), Query Frame = 1
Query: 313 IKHSFLEELLDALRGAVPEGPRLLFLEDTLAVILVAIAARAVRQVWKILASPLAAKQAF--VADHGFAVVRHLPAVARLLQKEIEKTEAHLQATLRP-GKDDGE--TLRSLPAEGKQREE----MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYR-ERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
IKHS LE L R P D + +I V V + L L+ KQA + + A + ++P + R ++ EI+K E ++ +++ GK E + LPA+GK EE M + + E A+W G SGAVY +E H + +A LFS +NPLH DLWPS ++FEAEVI+MTA ++ GG VCG L+SGGTESIVLA K HRD++R + +T+PE++AA TAHAAIDKAC + I+LIKVPVD VT + D+KA ++A TIM+Y+SAP+FP G ID +E L+ +ATRYG
Sbjct: 50 IKHSLLEMTLAKCRTYAPIAT--FVAGDAIVIITVIQLTYIVFDYLRKLRYGLSKKQAINKLGNAALATLNYIPMLQRKVRSEIQKIEKDIEHSIQEQGKSPVEFPKIYELPAKGKSPEEVLDTMTKMVKGEDARWKDGLVSGAVYHGEEAHLELLNKASSLFSVTNPLHADLWPSVVRFEAEVIAMTASMMSGGSPDVCGTLSSGGTESIVLATKTHRDWFRHDHNITAPEVIAAVTAHAAIDKACDMFGIKLIKVPVDPVTFQIDLKAVQWNITANTIMIYSSAPNFPQGTIDDIEALSAIATRYG 355
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A835YUB4_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUB4_9STRA) HSP 1 Score: 216 bits (550), Expect = 2.100e-62 Identity = 107/185 (57.84%), Postives = 139/185 (75.14%), Query Frame = 1
Query: 658 MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAE--VISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
M A +E KW+ G+ SGAVY +H + +AY LFS SNPLH D+WPS ++EAE +ISMTARLLDGGDA VCG L+SGGTESI+LA K+H +YR+ G+T+PE+VA +AHAAI+KAC+LM I+LIKVP+D T K V+A ++S TIM+YASAPSFP G+IDP+ +L+ LA R+G
Sbjct: 1 MSAAAAKEDGKWENGRVSGAVYHGGRQHMQLLDQAYSLFSLSNPLHTDIWPSVTQYEAEGELISMTARLLDGGDANVCGSLSSGGTESIILATKSHLQYYRQHGITAPEVVACVSAHAAIEKACALMGIKLIKVPMDPKTYKVSVRAIRRSLSVNTIMIYASAPSFPQGIIDPIAQLSDLALRHG 185
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A0P1AR24_PLAHL (Sphingosine-1-phosphate lyase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR24_PLAHL) HSP 1 Score: 220 bits (560), Expect = 3.100e-62 Identity = 122/238 (51.26%), Postives = 166/238 (69.75%), Query Frame = 1
Query: 514 VRHLPAVARLLQKEIEKTEAHLQATLR---PGKDDGETLRSLPAEGKQREE----MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRER-GVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRY 1203
++ LP VA + E+ K E ++ +L+ P + E L SLP +G ++ MK LA KW G SGAVY ++EH + +A LF+ SNPLH DLWP+ KFEAEVI+MTA L++GG + VCG LTSGGTESI LAAK HR++YR++ G+TSPEI+A TAHAAIDKAC ++ IRLIKVP+D ++K D+ A ++SA TIM+Y+SAP+FPHG+ID +E L++LA +Y
Sbjct: 129 LKQLPVVANKVASEMLKIEKEVELSLKGNSPLEGKMEKLYSLPDQGMDDKKLLVLMKDLAGNSDDKWKDGLVSGAVYHGEKEHLDVLNQASGLFAVSNPLHADLWPAVTKFEAEVIAMTAELMNGGHSEVCGTLTSGGTESIFLAAKTHREYYRQKHGITSPEIIACVTAHAAIDKACEILGIRLIKVPMDSKSLKIDLNAVRWSISANTIMLYSSAPNFPHGIIDDIEGLSRLAVQY 366
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A485LK19_9STRA (Aste57867_22320 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK19_9STRA) HSP 1 Score: 219 bits (557), Expect = 8.450e-62 Identity = 127/245 (51.84%), Postives = 159/245 (64.90%), Query Frame = 1
Query: 502 GFAVVRHLPAVARLLQKEIEKTEAHLQATLRP---GKDDGETLRSLPAEGKQREE----MKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGD--AGVCGVLTSGGTESIVLAAKAHRDFYRE-RGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
AVV+ LP +A KEI K E +Q +L+ + D LP EG+ + M+ + E +W G SGAVY D+EH + + +AY LF+ +NPLH DLWPS ++ EAE++SM A L+GG GVCG +TSGGTESIVLA K HRD++R G+TSPEI+ A TAHAAIDKAC + IRLIKVPVD VT K DV A ++SA TIM+YASAPSFP G ID V L+ LAT YG
Sbjct: 124 AIAVVQRLPFLASSYAKEIAKIEHQVQTSLKEHAKSESDFPKHFKLPEEGQSSDAILATMRAMVAGEDKRWQDGLVSGAVYHGDDEHLALLNQAYGLFNVTNPLHADLWPSVVRMEAEIVSMAASFLNGGGKATGVCGSVTSGGTESIVLATKTHRDWFRHAHGITSPEIICAVTAHAAIDKACEMFGIRLIKVPVDPVTFKIDVPAVQWSISANTIMLYASAPSFPQGTIDDVAALSALATTYG 368
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A024T870_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T870_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.470e-61 Identity = 120/243 (49.38%), Postives = 161/243 (66.26%), Query Frame = 1
Query: 502 GFAVVRHLPAVARLLQKEIEKTEAHLQATLRP---GKDDGETLRSLPAEGKQRE----EMKLLAQRERAKWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYR-ERGVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLATRYG 1206
G ++++ +P + + EI K E ++ +L+ D +LP +G E MK + + E +W G SGAVY D++H + +AY LF+ +NPLH DLWPS ++ EAEVISMTA L+GG+ VCG LTSGGTESIVLA K HRD++R + G+T PEI+AA TAHAAIDKAC ++ IRLIKVPVD VT + DV A +SA TI++YASAPSFP G ID +E L+++A YG
Sbjct: 119 GISILKRIPILWTRYRNEIRKLEVQIERSLQEHAKSAADFPKQFTLPEKGTSSEVVLSTMKAMVKGEDNRWKDGLVSGAVYHGDDDHVGLLNQAYALFNVTNPLHADLWPSVVRMEAEVISMTASFLNGGNTEVCGALTSGGTESIVLATKTHRDWFRHDHGITKPEIIAAVTAHAAIDKACDMLGIRLIKVPVDPVTFRIDVAAVKWNISANTILIYASAPSFPQGTIDDIEALSKVAVTYG 361
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Match: A0A5D6YCM1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCM1_9STRA) HSP 1 Score: 215 bits (547), Expect = 3.510e-61 Identity = 119/240 (49.58%), Postives = 160/240 (66.67%), Query Frame = 1
Query: 490 VADHGFAVVRHLPAVARLLQKEIEKTEAHLQATLRPGKDDGETLRSLPAEGKQREEMKLLAQRERA----KWDAGKASGAVYSNDEEHSSTVTEAYRLFSRSNPLHPDLWPSGLKFEAEVISMTARLLDGGDAGVCGVLTSGGTESIVLAAKAHRDFYRER-GVTSPEIVAATTAHAAIDKACSLMKIRLIKVPVDQVTMKADVKATANAMSAKTIMVYASAPSFPHGVIDPVEKLAQLA 1194
V AV++ +P A L EI+K E ++ +L+ + LPA+G + L Q +W G SGAVY +++H + + +AY LFS SNPLH DLWP+ KFEAEVI+MTA L+ G A VCG L+SGGTESI LAAK HR+FYR + G+T PEI+A TAHAAIDKAC ++ I+LIKVPVD VT+K+DV A ++A TIM+Y+SAP+FPHG+ID +E L+++A
Sbjct: 123 VGGTAVAVLKKIPFAAGKLAGEIKKIEEQIEHSLKAESQHLGKVYELPAKGMADAALVALLQTLAGDADKRWQDGLVSGAVYHGEQDHLAVLNKAYELFSVSNPLHADLWPAVGKFEAEVIAMTANLMSHGSADVCGTLSSGGTESIFLAAKTHREFYRHKHGITQPEIIACVTAHAAIDKACEVLGIKLIKVPVDPVTLKSDVAAVKWNITANTIMIYSSAPNFPHGIIDDIEALSKVA 362 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6536.17349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6536.17349.1 >prot_Ecto-sp13_S_contig6536.17349.1 ID=prot_Ecto-sp13_S_contig6536.17349.1|Name=mRNA_Ecto-sp13_S_contig6536.17349.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=402bp MSTSDKRRSEMSFDAVSSICNIERRTWLSGKGLAAMAAGFIGTWWFLFYAback to top mRNA from alignment at Ecto-sp13_S_contig6536:2195..8160+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6536.17349.1 ID=mRNA_Ecto-sp13_S_contig6536.17349.1|Name=mRNA_Ecto-sp13_S_contig6536.17349.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5966bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6536:2195..8160+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6536:2195..8160+ >mRNA_Ecto-sp13_S_contig6536.17349.1 ID=mRNA_Ecto-sp13_S_contig6536.17349.1|Name=mRNA_Ecto-sp13_S_contig6536.17349.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6536:2195..8160+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |