mRNA_Ecto-sp13_S_contig6527.17336.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A6H5KB68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KB68_9PHAE) HSP 1 Score: 851 bits (2199), Expect = 4.250e-309 Identity = 424/455 (93.19%), Postives = 430/455 (94.51%), Query Frame = 3
Query: 21 MSPATRAGLSPNGSPKPKQGELSALQAAAQREIAAAAGAGAVDASTGVAVGHVSNYLSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEEEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTREGAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEAHHFLMRVSKDNVAQV 1385
MS ATRAGLSPNGSPKPKQGELSALQAAAQREIAAAAGAGAVDASTG+AVGHVSNYLSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAG G GG + + + A+ VMDEEEEWTKISTD LYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQ AYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTREGAMGKVDGCA+FWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEE HHFLMRVSKDNVAQV
Sbjct: 1 MSSATRAGLSPNGSPKPKQGELSALQAAAQREIAAAAGAGAVDASTGMAVGHVSNYLSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGXXXEGEGGEDLLKPEEEEDVPINAQ----VMDEEEEWTKISTDSLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQQAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTREGAMGKVDGCAMFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEGHHFLMRVSKDNVAQV 451
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A835Z3I4_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I4_9STRA) HSP 1 Score: 474 bits (1220), Expect = 2.870e-157 Identity = 270/511 (52.84%), Postives = 318/511 (62.23%), Query Frame = 3
Query: 237 RVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKA---VVVAGVG-GVGGGGRPTQRGTHLTKIA--------LLARIVPSVMDE--EEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQ----------------------------------------EVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQ-EEAHHFLMRVSKDNVAQVAVLEVLQRPR-GRQVPPAAAQLCVANTHLY--SNPELPDVKLWQCNALLQELEG------FVHSRQLPLLV 1571
R YVYS T+TG+ANKAYS +DH F++ W RGPERQ CANA CPRA SFSPLEWS +ALQG RIQC+ C +L+VPRH+S+FCN CFK+AWK H+ H V + Q AT P SP A V + VG G GGG + L IA L ++P ++ E++W ST+ TP DVGHCLRLECRAVLP G VC PR ++TEPVLS P G RFR+ SYNLLAEIYATQ AYP CDFWALSW YR+ NL REL+E+ ADVLCLQ EVQ+DAY FFQP L EKG+DGLYK+KTRE G +GKVDGCA+FWRR +FRL ENY + FNECARR+ A+ P EE + ++ R+SKDN+AQVAVLE+LQRPR GR P QLC+ANTHLY +NPELPDVKLWQC+ALLQELE FV SRQLPL+V
Sbjct: 11 RAYVYSTQRTSTGLANKAYSQSDHTFEFKWYRGPERQACANALCPRAASFSPLEWSTYALQGCRIQCIICSRLKVPRHKSIFCNAKCFKQAWKEHRATHAAVAQAQKKATNT--APGTGSDPSSPSLAGDGVDMVTVGSGEGGGALGVSIHSELLSIATGLSATGLLKGELLPEEHEDNGEDQWELFSTEPCITPSAADVGHCLRLECRAVLPDGSLVCMPRSVSTEPVLSVPXXXXXXXXXXXXXXXXXXG-RFRIVSYNLLAEIYATQQAYPSCDFWALSWNYRRANLARELVESAADVLCLQKQHRGGGERPALQNNGRDTAQLRSEMRGGTAAGGSAGAGSEVQADAYHAFFQPLLLEKGFDGLYKSKTRESMGLVGKVDGCALFWRRNRFRLVENYAIEFNECARRSAGAIGLSPNTEEGNQYMHRLSKDNIAQVAVLELLQRPRAGRMGGPQ--QLCIANTHLYRQANPELPDVKLWQCHALLQELEHLVELEHFVMSRQLPLMV 516
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A6S9ETF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ETF7_HETAK) HSP 1 Score: 472 bits (1215), Expect = 3.530e-157 Identity = 263/503 (52.29%), Postives = 322/503 (64.02%), Query Frame = 3
Query: 174 HVSNYLSLRLDRPLEGCQLRPRVYVYSK------------LMTTTGVANKAYSNTD--------------HRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEEEEWTKISTD--CLYTPKEEDVGHCLRLECRAV-LPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEAHHFLMRVSKDNVAQVAVLEVLQRP--RG---RQVP-PAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSRQLPLLV 1571
H LSLRL+RP+E C+L+PR Y++ K + T+G ++ YS+T H F Y W RGPERQVCAN +CPRA SFSP++WSK A G R+QCV C KL++PRH S+FC C ++AW SH+ H L Q E + V GV + + + A +E+EEW +IS LYTP DVGHCLRLECRA T E +C PR+ITTEPVLS PP+PP+R+LV VKG G GGG+RFR+ +YN+LAEIYATQ YP+ DFWAL+W YRK NLLRELLE+ ADVLCLQEVQ+D Y+ F L E GY+GLYKAKTR+ G+ GKVDGCA+ WRR+KFRL+ENY + FN+CARRA A++ GL E A +L RV KDN+AQVAVLEVLQ P RG R+ P P LC+ANTHLYS+PE PDVKLWQ AL+QELE FV SR LPL+V
Sbjct: 13 HPRVQLSLRLERPIEACELQPRAYLFIKGVGAALNNRGGNQVATSGGSDN-YSSTQKAAMAAAGFSLNEPHYFNYKWLRGPERQVCANPTCPRARSFSPVDWSKRARSGHRLQCVCCMKLKLPRHTSIFCTPACMQQAWPSHKYRHIIPDSPAKLPATISQEDLVEEVEKN-----VELEEEGVEDNEPSARERDDVKNFGINA-------EEDEEWVEISDGPTALYTPTAADVGHCLRLECRAFKTATDELLCPPRVITTEPVLSAPPIPPKRALVAVKGAGGGGGLRFRVVTYNILAEIYATQQMYPHIDFWALNWTYRKHNLLRELLESSADVLCLQEVQADHYENFLARALQEAGYEGLYKAKTRDSMGSFGKVDGCALLWRRSKFRLAENYAIEFNDCARRAAASL-GLGPEAAAAYLHRVCKDNIAQVAVLEVLQTPAQRGGAPRRPPGPQNTHLCIANTHLYSHPEFPDVKLWQTQALMQELEHFVLSRNLPLMV 501
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: W7UA28_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA28_9STRA) HSP 1 Score: 432 bits (1111), Expect = 2.970e-141 Identity = 228/468 (48.72%), Postives = 296/468 (63.25%), Query Frame = 3
Query: 189 LSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTR--IQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEEEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGG-GVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEAHHFLMRVSKDNVAQVAVLEVLQRPRGRQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSRQLPLLVLC 1577
L++RLDRP+EGC + P Y+Y K G + ++Y W RGPER VCAN +CPRA SF+P++WSK+A +G IQCV C KLR+PRH SVFC + CF++AWK+H++ H+ R + A + P A+++ P Q G T + + E++W ++ ++ Y P+ D+G CL+LE R + P G PR+ TEPVLS PP P+R L+ VK + + G++FR+ +YN+LAEIYATQ YPYCD W L+W YRK NLLRE+ E ADVL LQEVQ+D Y+Q P LSE+GYDGLYK KTRE GA GKVDGCAI WRR KFRL+E Y + FN+CARR + + GL ++ H FL RV KDNVAQ VLEVL RPRG + + +C+ANTHLYS+PE PDVKLWQC+ LLQ LEG +PL VLC
Sbjct: 22 LNVRLDRPVEGCLISPHAYLYQK-----GEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTD----------------------PLQDGEEETPXXXPLDYL-TADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPXXPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASEL-GLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRH--GGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPL-VLC 457
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A7S2PG38_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG38_9STRA) HSP 1 Score: 370 bits (950), Expect = 1.090e-117 Identity = 222/483 (45.96%), Postives = 291/483 (60.25%), Query Frame = 3
Query: 186 YLSLRLDRPLEGCQLRPRVYVYSKLM---TTTGVANKAYSNT--DHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGT-RIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEE--EEWTKISTDCLYTPKEEDVGHCLRLECRAV-LPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQ-EEAHHFLMRVSKDNVAQVAVLEVLQRP-------RGRQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSR--QLPLLV 1571
+LSLR+DRP+EGC LRP Y+YSK + + G +K H F Y W RGP+++ CA CPR SFSP +WSK+AL+G +QCV + +R+ FCN CFK AWK+ Q L ++ +A +S+S VG VG GG + + A I + D E +EW IS + +Y P E D G L+LE AV L TGE + R++ T+ VLS P P + +LVTVKG G G RFR+ +YN+LAEIYATQ YPYCDFWALSW YR N+LREL +AG DV+CLQEVQ+D Y+ L+E GY+G++K KTR G GKVDGCAIFWRR+KF L E+Y++ FN+ A+R + P +E +L R+ +DNVAQ+ VLE++Q+P R + P QLC+ANTHLYS+ + PDVKLWQ LLQELE FV SR LPL++
Sbjct: 13 HLSLRVDRPVEGCTLRPHAYMYSKKIDEKSRDGPESKMMRTVIPPHDFHYRWLRGPKQEPCAYMKCPRRTSFSPHDWSKFALRGGYSLQCV---SQQSSLYRATFCNSNCFKHAWKT----------QYTLPKKMQKYSSADSWSVSSSGNKDDLSVGSVGSGGNNPATPMNGIQRQHPAPIFFNDADGEGIDEWEDISHEYMYVPDENDAGRKLKLEAIAVSLETGE-ILMSRVVKTDIVLSKTPPPKKMNLVTVKGAGXXXGARFRVVTYNILAEIYATQQQYPYCDFWALSWEYRFHNILRELSDAGGDVVCLQEVQADHYENSLYIALNEIGYEGVFKPKTRAAMGLAGKVDGCAIFWRRSKFHLVESYSIEFNDLAQRQAQVIGLNPNSKEGSAYLNRLMRDNVAQLVVLELVQQPTMSNRSNRSNREP--MKQLCIANTHLYSHKDYPDVKLWQTWQLLQELETFVMSRGSNLPLMI 479
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A7S1FRM5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRM5_9STRA) HSP 1 Score: 366 bits (939), Expect = 1.830e-116 Identity = 204/474 (43.04%), Postives = 275/474 (58.02%), Query Frame = 3
Query: 186 YLSLRLDRPLEGCQLRPRVYVYSKLMTTTGV--------ANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQG-TRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEEEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQ-EEAHHFLMRVSKDNVAQVAVLEVLQRPRGRQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSRQLPLLV 1571
+LSLR+DRP+EGC +RP Y+YSK + + + T H F + W RGP ++ CA + CPR SFSP +WS +AL G +QC+ +++ FCN CF +AWK+ VRR P E + R + + + ++ EEW +IS D ++ EDVG +++EC AV GE V R + T+ VLS P P +R++VT+KG +G G RFR+ +YN+LAEIYATQ YPYCDFWALSW YR N+LREL + G DV+CLQEVQ+D Y+ P L+E G++G+YK KTR+ G GKVDGCAIFW+++KF L E+Y++ FNE A+R + P+ EE +L R+S+DNVAQ+ VLE Q GR Q+C+ANTHLYSN + PDVKLWQ LLQELE FV SR LPL++
Sbjct: 12 HLSLRVDRPVEGCNMRPHAYMYSKKLDERDLDKPMPPYSKRAPHQPTQHEFHFRWFRGPMQEPCAFSGCPRRTSFSPHDWSSYALGGGCGLQCISTQS---SLYKANFCNSNCFVQAWKTQYT----VRRNL---------PHDEEIEIE------------------DDCRADSSSPTLMSYNDFGASAEDNEEWIEISQDGVFATAAEDVGRKIKVECTAVGLDGE-VLLRRAVKTDLVLSRAPDPIKRNIVTMKGAATGNGARFRVITYNILAEIYATQQMYPYCDFWALSWDYRFQNILRELKDVGPDVMCLQEVQADHYETHLYPSLNEAGFEGVYKQKTRQAMGISGKVDGCAIFWKKSKFHLVESYSIEFNELAQRQCQVLGMNPRSEEGAAYLNRLSRDNVAQLIVLEFAQPSSGRNSARDQNQVCIANTHLYSNKDFPDVKLWQTWQLLQELETFVLSRNLPLMI 450
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A6V2A2F9_9STRA (Hypothetical protein n=5 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2A2F9_9STRA) HSP 1 Score: 356 bits (913), Expect = 8.250e-112 Identity = 215/497 (43.26%), Postives = 278/497 (55.94%), Query Frame = 3
Query: 186 YLSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNT--------DHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKE------QPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQR------GTHLTKIALLARIVPSVMD------EEEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVK--GVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLP--QEEAHHFLMRVSKDNVAQVAVLEVLQRPRG-RQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSR--QLPLLV 1571
+LSLR+DRP+EGC +RP Y+Y K + + +T +H F Y W RGP + CA CPR SFSP +WSK AL G+ + C + +S FCN CF +AWK+ V R A G + S S A V V GR T G + + ++ D ++EW +IS D LY P EDVG L+LE A E+ R++ T+ VLS P P +R+LVT K G GSGGG RFR+ +YN+LAEIYATQ YPYCDFWALSW YR N+LRE+++ DV+CLQEVQ+D Y+ +S+ G++G+YK KTR+ G GKVDGCA+FWRR KF L E+Y++ FNE A+R + G EE +L R+SKDNVAQ+ VLE+ Q P R Q+C+ANTHLYSN + PDVKLWQ LLQELE FV SR LPL++
Sbjct: 14 HLSLRVDRPVEGCNMRPHAYMYGKKLDERDLDKPLPPHTKMSREPPPNHEFSYRWFRGPHLEPCAYEGCPRRTSFSPHDWSKHALGGSGCS-LQCISTQSSLFKSTFCNSNCFIQAWKTQYT----VPRDAPQARGGSGASTPVHSRSGSVGSTDDDDAQSVGSNYSVNSNGRNTPGTPRGFVGAYQSALSFNDYGASEYPDGGYGNQPQDEWVEISRDQLYVPGTEDVGRKLKLEAAAYSSETGELLMHRVVKTDLVLSRAPDPAKRNLVTAKTGGGGSGGGARFRMVTYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREIVDVCPDVVCLQEVQADHYENHIYNAMSDAGFEGVYKQKTRQSMGLAGKVDGCALFWRRTKFHLVESYSIEFNELAQRQATQVLGFNPRSEECISYLNRLSKDNVAQLVVLELAQPPMSNRPNREPINQVCIANTHLYSNKDFPDVKLWQTWQLLQELETFVLSRGTSLPLMI 505
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: K0SZX4_THAOC (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZX4_THAOC) HSP 1 Score: 353 bits (907), Expect = 1.890e-111 Identity = 201/476 (42.23%), Postives = 273/476 (57.35%), Query Frame = 3
Query: 186 YLSLRLDRPLEGCQLRPRVYVYSKLMTTTGV-ANKAYSNT------DHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTRIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGVGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEEEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGV-GSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLP--QEEAHHFLMRVSKDNVAQVAVLEVLQRPRGRQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSR--QLPLLV 1571
+LSLR+DRP+EGC LRP Y+Y K + N A+S +H F Y W +GP CA CPR +SFSP +WS ++L GT + + C + +R+ FCN CF +AWK+ QA + + A S L V GG P+ P+ E+EWT+IS +Y P+ EDVG L+LE A E+ R++ T+ VLS P P +R+ +T GS GG RFR+ +YN+LAEIYATQ YPY D W+LSW +R N++RE+++ D++CLQEVQ+D Y+ + + GY+G+YK KTR+ G GKVDGCA+FWRR KF LSE+Y++ FNE A+R V GL EE + L ++SKDNVAQ+ VLE+ Q R ++ Q+C+ANTHLYSN + PDVKLWQ LLQELE FV +R LPL++
Sbjct: 11 HLSLRVDRPVEGCTLRPHAYMYGKKLDDREANGNHAHSKICREPPPNHEFSYRWFKGPPVDPCAYDECPRRSSFSPHDWSTYSLGGTGVLSLQCISSQSSLYRATFCNPQCFVQAWKTQFTLDRGADEPQARCSTPNRRRAGSYNDLDDDAREVTI----EGGSSGPS---------------TPANTAYEQEWTEISHGEMYVPRPEDVGRKLKLEAAAYSSDSGELLMHRVVKTDLVLSRTPEPDKRNFITKSAAPGSAGGARFRVATYNILAEIYATQQQYPYADLWSLSWDFRFQNIIREIIDVAPDIVCLQEVQADHYESHLYNAMHDAGYEGVYKQKTRQAMGLTGKVDGCALFWRRTKFHLSESYSIEFNELAQRQVTQGMGLHARSEEGANLLNKLSKDNVAQLVVLELAQATRNDRL---NNQVCIANTHLYSNKDCPDVKLWQTLHLLQELETFVMARGTNLPLMI 464
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A1E7FFJ1_9STRA (Exo_endo_phos-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFJ1_9STRA) HSP 1 Score: 353 bits (906), Expect = 9.320e-111 Identity = 213/514 (41.44%), Postives = 286/514 (55.64%), Query Frame = 3
Query: 186 YLSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNT--------DHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTR--IQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRR-----------------QQALAT--------------GKEQPPAASEFSLSPKKAVVVAG-VGGVGGGGRPTQRGTHLTKIALLARIVPSVMDEEEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVK-GVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLP--QEEAHHFLMRVSKDNVAQVAVLEVLQ---RPRGRQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSR--QLPLLV 1571
+LSLR+DRP+EGC ++P Y+Y K + V S++ +H F Y W RGP + CA C R SFSP +WSK A+ G+ +QCV + FCN CF EAWK+ + ++R + L + G + P SE S S G +GG GGG P G + + +EEEW ++S + Y P ++D+G L+LE A E+ R++ T+ VL+ P P +RSLVT K G G+G G RFR+ SYN+LAEIYATQ YPYCD WALSW YR N++RE+++A DV+CLQEVQ+D Y+ +SE+G++G+YK KTR+ G GKVDGCA+FWRR KF L E+Y++ FNE A+R + GL EE +FL R+SKDN+AQ+ VLE+ R + P Q+C+ANTHLYSN E PDVKLWQ LLQELE F SR LPL++
Sbjct: 11 HLSLRVDRPVEGCNMKPHCYMYGKKLDERDVDKPLPSHSKKMREPPPEHEFSYRWFRGPRSEPCAYEGCTRRTSFSPHDWSKHAIGGSGCGLQCVSTQS---SLFKCTFCNSNCFVEAWKTQYTVPKDMQRPSRGTPMRKRTGSVDSMEDDLRSVGSVGSSDRINGGGGAKSPANFSEASGSSGPPGTPRGYLGGYNGGGAPGSAGPYKNG---------NHPQKEEEWIEVSREQFYVPGQDDIGRRLKLEAAAYSSETGELLMHRVVKTDLVLARAPDPVKRSLVTAKNGAGAGSGARFRIVSYNVLAEIYATQQQYPYCDIWALSWEYRFHNIMREIVDAAPDVICLQEVQADHYEDHIYAAMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRTKFHLVESYSIEFNELAQRQATQVLGLNPRSEEGTNFLNRLSKDNIAQLVVLELASPQLATRTNRDP--INQVCIANTHLYSNKEFPDVKLWQAWQLLQELENFAMSRGTSLPLMI 510
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Match: A0A448ZJ52_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ52_9STRA) HSP 1 Score: 352 bits (902), Expect = 3.980e-110 Identity = 219/517 (42.36%), Postives = 285/517 (55.13%), Query Frame = 3
Query: 174 HVSNYLSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNT--------DHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGT--RIQCVPCHKLRVPRHRSVFCNVTCFKEAWKSHQQHHEHVRRQQALAT-----------------------GKEQPPAASEFSLSPKKAVVVAG----VGGVGGGGRPTQRGTHLTKIALLARIVPSVMDE-----EEEWTKISTDCLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVK-GVGSGGGVRFRLCSYNLLAEIYATQHAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLP--QEEAHHFLMRVSKDNVAQVAVLEVLQRPR--GRQVPPAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSR--QLPLLV 1571
+ S +LSLR+DRP+EGC +RP Y+Y K + S++ DH F Y W RGP CA C R SFSP +WSK AL G+ +QCV R FCN CF EAWK+ +H + + T ++ ++ S SP +G VG GG R GT + P + EEEW +IS D Y P +DVG L+LE A E+ R+I T+ VL+ P P +RSLVT K G G+G G RFR+ +YN+LAEIYATQ YPYCD WAL+W YR N++RE+++A DV+CLQEVQ+D Y+ +SE+G++G+YK KTR+ G GKVDGCA+FWRR+KF L E+Y++ FNE A+R + GL EE +FL R+SKDNVAQ+ VLE L P+ R Q+C+ANTHLYSN E PDVKLWQ LLQELE F+ SR LPL++
Sbjct: 7 YYSWHLSLRVDRPVEGCNMRPHCYMYGKKLDDREADKPLPSHSKKMREPPPDHEFSYRWFRGPRSTPCAFEHCTRRTSFSPHDWSKHALGGSGCSLQCVSTQS---SLFRCTFCNSKCFIEAWKT-----QHTVPRDSRGTPMRKRVGSMDSMDDDLRSVGSIGSSDRTNGSNGGSKSPANFSDTSGSNYSVGNTGGQNRQPP-GTPRGYMGSYNNGAPGSSAQCNNNGEEEWIEISRDGFYVPGADDVGRKLKLEAAAYSTETGELLMHRVIKTDIVLAQAPHPLKRSLVTAKNGAGAGSGARFRIVTYNVLAEIYATQQQYPYCDIWALNWEYRFHNIMREIVDAAPDVVCLQEVQADHYENHLYASMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNELAQRQATQVMGLNPRSEEGINFLNRLSKDNVAQLVVLE-LANPQLASRANRDPINQVCIANTHLYSNKEFPDVKLWQAWQLLQELENFIMSRGTSLPLMI 513 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6527.17336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6527.17336.1 >prot_Ecto-sp13_S_contig6527.17336.1 ID=prot_Ecto-sp13_S_contig6527.17336.1|Name=mRNA_Ecto-sp13_S_contig6527.17336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp MSPATRAGLSPNGSPKPKQGELSALQAAAQREIAAAAGAGAVDASTGVAVback to top mRNA from alignment at Ecto-sp13_S_contig6527:662..8075- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6527.17336.1 ID=mRNA_Ecto-sp13_S_contig6527.17336.1|Name=mRNA_Ecto-sp13_S_contig6527.17336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6527:662..8075- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6527:662..8075- >mRNA_Ecto-sp13_S_contig6527.17336.1 ID=mRNA_Ecto-sp13_S_contig6527.17336.1|Name=mRNA_Ecto-sp13_S_contig6527.17336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6527:662..8075- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |