mRNA_Ecto-sp13_S_contig651.17305.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: D7FUB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB8_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 5.430e-142 Identity = 220/230 (95.65%), Postives = 223/230 (96.96%), Query Frame = 2
Query: 77 MARSAAYILAATAIASSTTAFVPMGGARLSSAPQATAERISGTCRRGRQHAAAAAVTSLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 766
MARSAAY+LAATAI SSTTAFVPMGGARLSSAPQATAER S TCRRGRQ AAAAV LSMAIRAVES+NADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEK+FLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV
Sbjct: 1 MARSAAYVLAATAIVSSTTAFVPMGGARLSSAPQATAERRSATCRRGRQTDAAAAVAPLSMAIRAVESFNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKFFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 230
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A836CAF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF1_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.070e-35 Identity = 88/189 (46.56%), Postives = 109/189 (57.67%), Query Frame = 2
Query: 236 AAVTSLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYV-GEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETP-----------WDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 766
A T+LSM I+AV Y++ F L E+ A L YL+H DM EVCKQFD SAEYV GEIFQPVPYS TP GMP E +Y ++ Y IAN+PPVVMF AKIFKPSRLCAV++V G S A A L E + N + + E W+ +G G DDD +LD++V+
Sbjct: 43 APATALSMGIKAVRDYDSSFTLSEECTALLTAYLQHPDMAKEVCKQFDLTSAEYVDGEIFQPVPYSPNTPHGMPLAFE-RYLNHDDYVIANVPPVVMFKAKIFKPSRLCAVFRVAGRSAAAVAALREAREHAQNNAVPRGAADQSEGSAGAGQSDSGEVWEGLGDVIRASFEEGDGDYDDDDELDALVL 230
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: W7TX51_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX51_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.120e-29 Identity = 76/199 (38.19%), Postives = 112/199 (56.28%), Query Frame = 2
Query: 236 AAVTSLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDA-KAVLNERILRL--------RENEKRKKEEAELETP------------WDDIGSAFTEVH-NMPVGSDDDDVDLDSMVV 766
A+ ++L +R VE+++ F L ++ L GY+ +DM EVCKQ C SA + G++FQPVPYS TP GMP++ E+ + LN Y I N+PP VMF AKIFKP RLCAV+ ++GL D K +L + R+ + + K + +E + P W+ +G A EV G ++D+ LD+MVV
Sbjct: 39 ASSSTLFGGLRGVETFDGAFTLSPESEGVLVGYMECEDMKKEVCKQAKCTSARFTGQLFQPVPYSPGTPLGMPREFED-FHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFTIEGLDPDEEKKILEKARARMDLQAQAAAHQPMEEKDDGSEEKRPVTVLKGSPKEENWNGVGKALHEVALGEKAGEEEDEAALDAMVV 236
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A6U4Q2X6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4Q2X6_HEMAN) HSP 1 Score: 124 bits (311), Expect = 5.570e-29 Identity = 79/177 (44.63%), Postives = 100/177 (56.50%), Query Frame = 2
Query: 248 SLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRK---KEEAELETPWDDIGSAFTEVHNM-PVGSDDDDVDLDSMVV 766
+L M I+AVE + F+L ++ A L +L M V KQ +AE+ G++FQPVPYS TP GMP D E+ YFLN Y I N+PP +MF AK FKPSRLCAVY + G+ V E IL +E R+ +PW +G A + M PV DDD DLDSMVV
Sbjct: 68 ALRMGIKAVEHFEGGFQLSDEVQAALTEHLTSDKMDLTVEKQAHAAAAEFTGKLFQPVPYSVQTPHGMPADFEQ-YFLNPDYAIINVPPQIMFEAKCFKPSRLCAVYALKGVDP----VHREAILSQKEAVSRRGVAPAPPRGGSPWAGMGGAMADASRMDPV---DDDADLDSMVV 236
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A8J7F1K5_9CYAN (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F1K5_9CYAN) HSP 1 Score: 111 bits (278), Expect = 6.690e-26 Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 2
Query: 257 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 571
MA++ ++S++++F LE + ATL L ++ + +VC+Q CE E+ +FQPVPYS ATP+GMP + E KY +E+Y I N+PP MF AKIFKPSRLCA+YK
Sbjct: 1 MALKIIQSFDSNFTLEPQAKATLFELLTNESFLKQVCQQSKCEQVEFTELLFQPVPYSSATPKGMPAEFE-KYHESEEYIILNVPPNFMFQAKIFKPSRLCAIYK 104
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A7S0VGI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGI5_9CRYP) HSP 1 Score: 109 bits (272), Expect = 1.160e-24 Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 2
Query: 242 VTSLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLS-EDAKAVLNER 616
+ L M I+AVE++ F+L ++ L G+L M V KQ AE+ G++FQPVPYS TP GMP D EE YFL+ Y I N+PP +MF AK FKPSRLCAV+ + G++ E + VL+++
Sbjct: 1 LAGLRMGIKAVENFEGGFQLSDEVREALTGHLTSDKMELMVEKQAHAADAEFTGKLFQPVPYSVNTPHGMPADCEE-YFLHPDYLIINVPPQIMFEAKCFKPSRLCAVFALKGVAPEQRETVLSQK 125
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A6P1AAG1_9CYAN (Uncharacterized protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AAG1_9CYAN) HSP 1 Score: 107 bits (268), Expect = 1.610e-24 Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query: 257 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 571
MA++ VE+++ F L +T TL +L+++ I ++C+Q E E+ +FQPVPYS +TP+GMP ++E Y+ NE Y I N+PP +MF KIFKPSRLCA+Y+
Sbjct: 1 MALKIVENFDGSFTLPSETQETLFTFLKNEKFIQQICQQVKAEKLEFTELLFQPVPYSISTPKGMPAELES-YYNNEDYAIVNVPPNLMFQCKIFKPSRLCAIYR 104
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: UPI001CCA52C6 (hypothetical protein n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CCA52C6) HSP 1 Score: 105 bits (262), Expect = 1.170e-23 Identity = 47/105 (44.76%), Postives = 72/105 (68.57%), Query Frame = 2
Query: 257 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 571
M +R ++ ++ DF L+ + ATL LR++ + +V +Q C E+ ++FQPVPYS ATP+GMP + E+ Y+ ++ + I N+PP MF AKIFKPSRLCA+Y+
Sbjct: 1 MPLRIIDDFDGDFTLDPEAEATLFELLRNEAFLQQVAQQLQCPKVEFTEQLFQPVPYSAATPKGMPAEFEQ-YYASKDHAIINVPPNFMFKAKIFKPSRLCAIYR 104
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A0S3TRB2_9CYAN (Uncharacterized protein n=10 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0S3TRB2_9CYAN) HSP 1 Score: 105 bits (261), Expect = 1.660e-23 Identity = 50/111 (45.05%), Postives = 74/111 (66.67%), Query Frame = 2
Query: 257 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSE 589
MA++ +E++++ F LE + L L + + ++C+ +CE E+ +FQPVPYS ATP+GMP + E KY +E+Y I N+PP +F AKIFKPSRLCAVYK G+ +
Sbjct: 1 MALKIIENFDSSFTLEPQAKENLFKLLTSEAFLNQICQNLECEQVEFTELLFQPVPYSIATPKGMPAEFE-KYHESEEYVIINVPPNFIFTAKIFKPSRLCAVYKKLGIGD 110
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Match: A0A846H4X5_9CYAN (Uncharacterized protein n=1 Tax=Hassallia byssoidea VB512170 TaxID=1304833 RepID=A0A846H4X5_9CYAN) HSP 1 Score: 104 bits (260), Expect = 2.210e-23 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 2
Query: 257 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDG 580
M + ++++++ F LE + +L L + + +VC+Q +CE E+ +FQPVPYS TP+GMP + E KY N +Y I N+PP MFNAKIFKPSRLCA+Y+ G
Sbjct: 1 MPFKIIQNFDSSFTLEPELQKSLFSLLTSEAFLKQVCQQLNCEKVEFTELLFQPVPYSLTTPKGMPGEFE-KYHDNSEYAIINVPPNFMFNAKIFKPSRLCAIYRKIG 107 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig651.17305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig651.17305.1 >prot_Ecto-sp13_S_contig651.17305.1 ID=prot_Ecto-sp13_S_contig651.17305.1|Name=mRNA_Ecto-sp13_S_contig651.17305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp MARSAAYILAATAIASSTTAFVPMGGARLSSAPQATAERISGTCRRGRQHback to top mRNA from alignment at Ecto-sp13_S_contig651:3312..8696+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig651.17305.1 ID=mRNA_Ecto-sp13_S_contig651.17305.1|Name=mRNA_Ecto-sp13_S_contig651.17305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5385bp|location=Sequence derived from alignment at Ecto-sp13_S_contig651:3312..8696+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig651:3312..8696+ >mRNA_Ecto-sp13_S_contig651.17305.1 ID=mRNA_Ecto-sp13_S_contig651.17305.1|Name=mRNA_Ecto-sp13_S_contig651.17305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=693bp|location=Sequence derived from alignment at Ecto-sp13_S_contig651:3312..8696+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |