mRNA_Ecto-sp13_S_contig646.17237.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE) HSP 1 Score: 1428 bits (3696), Expect = 0.000e+0 Identity = 777/887 (87.60%), Postives = 792/887 (89.29%), Query Frame = 2
Query: 539 GSNQLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLVVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGSVTAGADGDDSGDGGSSAA-------VVAGWAEVREKTRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVISERLGPAGVNPDGXXXXXXXXXXXXXXXXXXXXXXXXXDVEDGXXXXXXXXXXXXXXXAQGRXXXXXXXXXXXELRQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAAAAAGVAAGYGDAAVAEEGGAGSALARAGLFEPAFLLILHSLEAFAMGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWISRRQPEDEGGKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAALGGERARRQANYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLGRVGRGGG--GVCVHAKRAPGSGGRGVAIRKGEAVRVVIQKVEPQLKQVVATEFVDGMEGGAGRGGGQGADVVQTGDK 3172
G+NQLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSL+VRTEAGEPLTIDAGQIVGVWREDEMSGHLPLG VTAGADGDD GD SSAA VVAGWAEVREK RALLQG PARGLD+GAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRV+S+RLGPAGV+PDG DV DG AQ R +L QPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAA GVAAGYGDAA AEEGGAGSALARA LFEPAFLLILHSLEAFA+GGDEQSLIPEAKRVMV+ITGKAN TAAK ILVDVGLW SRRQPE+ GGKPGE GRD AGEEGGVIPW AEALEAA ALGGERARR+ NYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPP ALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTL PAVPLTFDQTDRLLEA EKGETG+GRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETA+YLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG VGRG GVCVHAKRAPGSGGRGVAIRKG+AVRVVIQKVEPQLKQVVATEFVDGMEGGAGRGGG+GADV Q GDK
Sbjct: 12 GNNQLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLLVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGRVTAGADGDDGGDXXSSAAXXXXXAAVVAGWAEVREKIRALLQGMPARGLDVGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDGRGGRRKQRARGAGKGGGAEGEVLVADVGDGAVGVRGGGGRGGTVNAQCRDERKQEEEE--DLSQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAA---GVAAGYGDAAAAEEGGAGSALARARLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVDITGKANSTAAKCILVDVGLWTSRRQPEEGGGKPGEEVGEVGRDEAGEEGGVIPWSAEALEAATALGGERARRRVNYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEATEKGETGDGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLGGVGRGXXXXGVCVHAKRAPGSGGRGVAIRKGQAVRVVIQKVEPQLKQVVATEFVDGMEGGAGRGGGRGADVTQAGDK 893
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA) HSP 1 Score: 303 bits (776), Expect = 2.860e-81 Identity = 252/758 (33.25%), Postives = 342/758 (45.12%), Query Frame = 2
Query: 836 WAEVREKTRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSP-GEA--------------FRPSAVERAAAAQVLAGERSRFKRVISERLGPAGVNPDGXXXXXXXXXXXXXXXXXXXXXXXXXDVEDGXXXXXXXXXXXXXXXAQGRXXXXXXXXXXXELRQPVL-ISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAAAAAGVAAGYGDAAVAEEGGAGSALARAG----------------------------LFEPAFLLILHSLEAFAMGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWISRRQPEDEG-------GKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAALGGERARRQANYGK---RRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 2947
W ++++ R LL P R LDL W+ A +GKG V++ A +LFG + + G + FQ S G A + PSA ER AA VLA + RFKRV P + PV+ + GGFK VDQSV T + F +V + + + A A + DAA A +A L + + I+HSLE A+GG L+P+AK + ++ + AA ++LV +G W R + G XXXXX +PW AEAL AAA + R RR+A Y + P +GAP P GR D+RGA+F VYC+D F DDA S DP+ RE+ IH+ D Q LV G LD VA+ R ++YLP+GPLFMMPP AL+A++FS NEA+TV + +DP TG V SR+MLT L P V LT + +LE T A A G + G + R AG + ++VD L ++T+ R+C AG AMP LVG + RV +GR+R+GT PLRRY+D+LAQRQ+ A+L L K+ + + + LT N A+R E ++L EAL HC +ATGL +A VPARGTGRG EV ++GLG
Sbjct: 12 WPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGA-RRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRV------PCVLRHS----------------------------------------------------------------DPVVSVCEGGFKPVDQSVVATNQAMSFATMVKD-QFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRR---DYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAP-LMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLG 693
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A4D9CV05_9STRA (RNB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV05_9STRA) HSP 1 Score: 226 bits (577), Expect = 5.110e-58 Identity = 154/459 (33.55%), Postives = 235/459 (51.20%), Query Frame = 2
Query: 1583 ILHSLEAFAMGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWISRRQPEDEGGKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAALGGERARRQANYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGR-RSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSL-VDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATG--RSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 2947
+LH LE F++G + L +++V+ + A P AK +L+ G W RR G PG A + PWP + LE A + RR+A K ++ P G H HD+R + G Y +D G+ F DDA DPET EV IHI DVQ LV L+ +AR R + YLP GPL ++PP AL+A S SD+ VNE VT + L P G V ++R++L+ + P + +D+ + LL A+ + R + A+++ L + R A G+ + R+ GE +A+ + L VDE L +Y++ R K V +P G V+ G +R+GTGPLRRY D+LAQ+Q+ ++L+G L+K +++ + + W+ ++ R ++ LE+ A +C A+ +A G +AVV A TG G EV L G
Sbjct: 332 LLHHLEVFSLGAGVEGLSSTSQQVLKALGEPATPEGAKRVLLRAGYWTERR-----GAGPGREENVAAETAAAQRM-AAPWPEDILELAKEALAKTERRRAALAK---VQRPNRPGRRGPHGRHDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHIADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDREVNECVTAAVTLGPD-GSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPTYRR-QAAQDLNVLLRASQARRALTKRSFSEGKRVSRVRRNTEGELEAIGFQRTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLAPGS---VSGGLDAARFGTGPLRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASRGKVLLESFATYCAAKAKAAGQAYAVVRATATGTGTEVMLPDAG 776
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A6U7IBS1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A6U7IBS1_9EUKA) HSP 1 Score: 137 bits (344), Expect = 4.030e-29 Identity = 231/945 (24.44%), Postives = 355/945 (37.57%), Query Frame = 2
Query: 551 LRLLPGTVILQPGDPIEFWHAQGLVLGNY-ESPVPGRQ-SLVVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGSVTAGADGDDSGDGGSSAAVVAGWAEVREKTRALLQGTPARGLDLGAFWRA--ASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVISERLGPAGVNPDGXXXXXXXXXXXXXXXXXXXXXXXXXDVEDGXXXXXXXXXXXXXXXAQGRXXXXXXXXXXXELRQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAAAAAGVAAGYGDAAVAEEGGAGSALARAG-----LFEPAFLLILHSLEAFAMGGDEQSLIPEAKRVMVEITGK-----ANPTAAKSILVDVGLWISRRQPEDEGGKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAALGGERARRQANYGKRRPLEE----------------------------------VGAPAPFGRHVLH---DFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREG------------------------VKFRKGAGGETQALEVAASRQS--LVDELLTVYTQEVYRLCKRAGVA-MPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVV----------PARGTGRGREVRLEGLGRVG-----RGGGGVCVHAKRAPGSGGRGVAIRKGEAVRVVIQKVEPQLKQVVATEFVD 3106
+ + P + +L PG +E WH LV+GN+ ES V + +L+V G + +D GQ+V VW D M GH S WA ++ + ALL P LDL W+ A K + A+ LF + + G A +R AA Q+LA ER+ FKR+ P + G DG +G ELR + GGF+ + +S A + +A+ + +R A A V E A L R G ++ PA L +L +E A+G + +A + + + G AN T A+ +L+DVG W++ + R G + P+P EAL ++ RR+A K P G LH D R Y ID T F DDA S D T + +HI D+ +VP GS LDDVAR+R + Y PL M+PP L+ S K NE ++ I LD G V SR++ + + P LT+++ DRLL T + V +E++A+ + RR A R +G+ G V++R A + E+ ++ +VDE+L++++ KR + +P + + R T PLRRY D++AQRQ+ A+L GS + E A+ W + K ++ L AL +HC Q +G + AV+ P T RG + RV GG V R R +++G+ ++V ++ V+ + +V E +D
Sbjct: 39 MAVAPASGLLTPGSAVEVWHEGRLVVGNFRESMVRSKSCALIVELSCGRRIKVDGGQLVDVWPPDGM-GHSGPRSPND-------------------WAVLQRQCAALLAELPPHMLDLRPLWKRMLAEKGAKKLRIDSERVAQELFSSPHHS---------------GAAPEARLAQRLAAGQLLADERTLFKRL------PVQITASG---------------------------SDGDQS------------GEGSGGTC-------ELRW----THGGFRVLPRSTASS--LAEVALIQAMKERLAVMRAGPV--------QLEHAPAAERLVRTGEGVGRVWPPATLPLLAEVELVALG------LSKASKQIERVLGAFSLLPANATGAQKLLLDVGQWVAGEADAEA------------RLGYSSGQWIDPFPREALAEGESMATAVNRRRAEL-KLTPXXXXXXXXXXXXXXXXPASGSSWLSRLLLPPEVEGCVAGTDDESSLGSLHGRVDLRSRFPRAYAIDTDKTDFRDDAVSYDVITGTLSVHIADLTNVVPPGSLLDDVARLRLQTIYTGGMPLHMLPPPLLRYCCLSAKLPNECLSAVISLDAF-GRVRHSRLVRSVVPPVRTLTYEEVDRLL-------TDTSIDSEVHRELRAIASITRRRACNRHRVRQGKAGAAQTGAARGPRYATSSPATSSPASVRWRHVAADHSWRPEIVPQTEAHTVVDEVLSIFSYAARGAAKRHNLLRLPQMENR---------RIATAPLRRYADLIAQRQLCAVLCGSPGMPAS---EVAAIERWIRAKQSDMATQQPQPQMLRALESHCARQATVSGSDFAVLEGTVVKTGVAPEARTSRGNAPTKQPPSRVEVEIRLHAGGVSAVATARTASQARRATRLQQGDVLQVRLRSVDTRRGRV-EVELID 842
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A482SRG6_9ARCH (RNB domain-containing ribonuclease n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRG6_9ARCH) HSP 1 Score: 130 bits (326), Expect = 6.130e-27 Identity = 128/489 (26.18%), Postives = 210/489 (42.94%), Query Frame = 2
Query: 1568 PAFLLILHSLEAFAMGGDEQSLIP--EAKRVMVEITGK-ANPTAAKSILVDV----GLWISRRQPED----EGGKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAALGGERARRQA--------NYGKRRPLEEVGAPAPFGRHVLHDFRG--ASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGE--GRLARVAKEIQALEYVGRRSAE-----ASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGR-SRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 2947
P+ L L +LE ++M + S +P +A +++++ G+ A+P+ A+++LV++ G + R + G GE V W LEAA L ++A+R+A YGKR G D R AS V CID F DDA S+ PET E+ +H+ DV G + L A+ R +SEYLP G + M PP AL+A++FS K NEA+T ++D +G V RV + + P V DQ + ++EA G + K+++ L +G R + + + R + K G E ++ +++ L++Y Y C + P +D V + R+ PLR +I QRQ+ A L L+ K+ + ++ ++ + S+L + ++ + R E G GRG VR+ G
Sbjct: 360 PSILRHLRALELYSM---QPSAVPPPQALKLILKRLGQDASPSGARALLVEMKHASGSYALRTGVDSGVMSSGDMQGESVRFH----------VASWQPSVLEAATKLSEDQAKRRAAIQADAGRKYGKR------------GYQGRIDLRASSASHPVMCIDAKSATFFDDAISLCPETGELLVHVIDVTGALRAHPELQQTAKERISSEYLPNGAIHMFPPKALEALTFSSKEPNEAITAAFKIDYASGSVLDYRVFPSIIGPVVSFDIDQANTIIEAKSSGSKNQVWPVATEAVKDLELLHDIGSRIVKNNPWLIANVKNRMLLDSRVSKKTGVMKIGFEESSPAHHIINACLSLYANATYHFCSSNNLPTPVAFVNRDTVNSSVVRRFAAHPLRNWISQQQQRQLRAALGIDSALSSKECAHAVMHHNSKKKQSSQILRKGKSQLEFDHFESYYMNWKRTIPSEEPEFEVVGMGRGGLVRVSQFG 823
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A2V3J848_9FLOR (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR) HSP 1 Score: 128 bits (321), Expect = 2.440e-26 Identity = 140/497 (28.17%), Postives = 215/497 (43.26%), Query Frame = 2
Query: 1583 ILHSLEAFAMGGDEQSLIPEAKRVM-VEITG-KANPTAAKSILVDVGLWISRRQPEDEGGKPGEXXXXXGRDGAGEE--------GGVIPWPAEAL------EAAAALGGERARRQANYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDP----ETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRS----AEASGRRERGREG----------------VKFRKGAGGETQALEVAASRQ----------------SLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPAR 2905
ILH +E A GG +P + +E G + A +L+D+ W S ++G P +GEE G P+ A +A RARR A P ++ A R +L GA VYCID +RFLDD+FSV+ + F+HITDV V +GS +D +AR R S YLP PL M+PP A+ A SFS EA+T+ I LD + ++ + + P + + ++Q D ++ KG+ L+R +E+ L+ + + + A+ RR R RE V+ +K AG + A+S + ++VD +LT + + K VA+P VA R GT PLRRY D++ QRQI +L ++ + E ++L R ++ + + E+L+ HC Q ATG +A+V R
Sbjct: 277 ILHEIEVAAAGGG----VPNGRAATALEALGYRRTDEGATHLLLDIEYWSSVPVQSNDGAYPDSKKQSTPDTVSGEESSSTEASRGSSFQTPSWAFPPLILHDAHKIRSRARARRSALQATENPRQKDSA-----RRLLRSSNGAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFSTSLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNII----KGDAKAIGLSR--EELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALPEGRDASTYVA----RCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRRMNELRNWLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGR 754
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A7S0ZJC8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJC8_9RHOD) HSP 1 Score: 112 bits (281), Expect = 2.690e-23 Identity = 87/273 (31.87%), Postives = 133/273 (48.72%), Query Frame = 2
Query: 1979 VYCIDGAGTRFLDDAFSVDPETRE-------VFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASR-QSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYL 2773
V+CID A F DDA S E E V +HI DV + S LD +A+ RA S YLP GPL M+PP ++A+SF+ + +EAVTV + +DP++G V + LT L PA LTF Q + + ++ L + + AL GR G+R + R + G + + S +DE+L + + R K V +P G Q R GT P+R+Y+D+ QRQI +I++G +++++ +L
Sbjct: 66 VFCIDDAVANFRDDAISCS-EIEEFGKRFLVVSVHIADVDESIEPDSDLDAIAKDRAQSIYLPAGPLHMLPPVLMEALSFNAEYASEAVTVRMLIDPESGQVEHYSIKLTYLPPATILTFQQASQAAKRTKE-------LNLMLEAGDALSRYGR------GKRNKNRSDYMSVRATGAQVVVEKYEFSDIHKAMDEILNLAGNCIRRFAKSKKVFLPERRGSQFFAL----RCGTAPMRKYMDLAVQRQIKSIIKGQSVGTQEEMVALNKWL 320
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A7S1TNE9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD) HSP 1 Score: 110 bits (275), Expect = 6.330e-21 Identity = 123/467 (26.34%), Postives = 196/467 (41.97%), Query Frame = 2
Query: 1583 ILHSLEAFAMGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWISRR-------QPEDEGGKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAALGGERARRQANYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSV-------DPETRE--VFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEAA------------EKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASR-QSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVV 2896
IL +E A G +S A V ++ ++N A+S L VG W + Q + +GG P E ++ +P L AA +R+ +RR L + G L + G C+D G F DDA S +R+ V +H+ DV +V GS LDD AR RA S YLP GPL M+PP ++A+SFS+ ++AV++ + + +G + ++ + + P V TFD + A + G+ LA + + A+ S GRR+R R + G + A S +DE+L + R + V +P G + R GT PLR+Y+D++ QRQI AIL+ ++D++ +L R +T+ L +L++H Q+R L A +
Sbjct: 225 ILRLIELCAASG--KSFPRAAVPVFSKLGFESNANGARSFLQSVGFWSASDAHYGPSIQRDSDGGAPKE---------------LLAFPPAVLAEAAH------QREKIEARRRILASKDGRSEAG---LWSYMGKV--AVCVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSETAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAISAMGSNNGHPKAVMRHRDSRGDAALALLVEAASAM------SRADGGRRKRDRSDFVSVRLKGDRVTVQQYAFSTIHEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAM----RCGTAPLRKYMDLVVQRQIKAILQYERPAKREDMVALNKWLESRLVETKKLVQAHREDALLASLSSHVSTQSRLADLGRAAL 653
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: A0A7S2DFQ6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFQ6_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.420e-20 Identity = 120/369 (32.52%), Postives = 168/369 (45.53%), Query Frame = 2
Query: 1979 VYCIDGAGTRFLDDAFSVDPETREVFIHITD-VQGLVPTGSTLDDVARMRAASEYLPQG-PLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKT------------GGVASSRVMLTTLS-----PAVPLTFDQTDRLLE-----AAEKGETGE--GRLARVAKEIQ----ALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSG-----YLNKKDLMETASYLTWRQ---NKTRASRDEEASRLS-LEALAAHCLAQTRAT-------GLEHAVVPARGTGRGREVRLEGLG 2947
V ID R DDA S D + + +HI+ + G +P S L+ +A+ +A + YLP L + P L A S S + VN VT+ LD T S V T S P LTF Q +R+L AA E + GR R+ +++ L Y RR G+E +K K QA+ ++ S+VD +L++Y++E Y LCKR GV+ P + G G RY T PLRRY D+LAQRQ+ +++ S L+ + + E S R+ K RA E SR + + LAAHC AQTRA G +V A TG +EV L+ G
Sbjct: 76 VVSIDQGSLR--DDAMSWDEASSTLSVHISAALPGALPMDSLLEVLAKQKAEAYYLPGSVTLQLFPNEVLNAGSLSSRDVNHCVTMRAVLDRTTTPQSTXXXXXXXXXXQSFSVREVTFSESLIGPVKTLTFTQANRILSSKVSPAATSLEDDDVTGRAHRMVHDLERVVTTLRYDNRR----------GQEPLKRTK------QAIASSSRAHSIVDTVLSMYSKEAYLLCKRKGVSTPRMPG-------GVVRYSTAPLRRYADLLAQRQLLSLVGASDTSDVEVLDAETVREAMSIAVRRRAQYTKFRAGEAESRSRAAAIHDLAAHCAAQTRAHEAAGATGGTVPVLVTAEATGNAQEVILKDFG 419
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Match: K0S3P0_THAOC (RNB domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3P0_THAOC) HSP 1 Score: 98.6 bits (244), Expect = 3.550e-17 Identity = 120/426 (28.17%), Postives = 176/426 (41.31%), Query Frame = 2
Query: 1583 ILHSLEAFAMG---------GDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWISRRQPEDEGGKPGEXXXXXGRDGAGEEGGVIPWPAEALEAAAAL-GGERARRQANYGKRRPLEEVGAPAPFGRHVLHD-FRGASFGVYCIDGAGTRFLDDAFSVDPETR------------EVFIHITDV-------QGLVPTG--STLDDVARMRAASEY-LPQGPLFMMPPTALKAMSFS--DKGVNEAVTVGIRLDPKTGGVASSRVMLTTLSPAVPLTFDQTDRLLEA-AEKGET------GEGRLARVAKEIQALEYVGRRSAEASGRRE-----RGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAIL 2719
I+H LE AMG GD + L + + ++ + + A+S L++VG W + ED G V PW A+ LEA+ +L E RR + ++ P + L D F +S CID T F DDA + + EV IHI DV +GL+P+ + L A R S Y LP GPL ++PP ALKA+S + N VT+ +D + G + + + T ++ LTF LL+ +K L+R ++ L R+ + ++E GR+G G GG Q + LVD L +Y + L +RA +P G + R GT PLRRYID +AQRQ A+L
Sbjct: 363 IIHRLECLAMGDAWRRSDNQGDRKDLEVDVRETLIGLGLPLSSEGARSALIEVGRWSN--VSEDNLGVV-----------------VEPWSADTLEASRSLVKAEEKRRTLLLNTCKSIKTKPRKKPLAQ--LEDRFDLSSLPCVCIDAKRTSFRDDAIGIRLRSSTGRKVSKAASKWEVLIHIADVSDIYLKGEGLLPSHDIALLRHAAEQRGMSRYDLPLGPLHLLPPVALKALSLKTDEDSCNRCVTLWAYIDERDGKLLEAGLERTLIASPTALTFADATSLLDCDTDKSNVKAVLSVAHRNLSRWSRRHANLNEAARKREDRLSQKELISNATGRDGRDD--GVGGSFQR----SRGHRLVDSSLDLYAFALGTLMRRANQPIPRAPGSMENRG---GRLGTAPLRRYIDGMAQRQAIAVL 758 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig646.17237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig646.17237.1 >prot_Ecto-sp13_S_contig646.17237.1 ID=prot_Ecto-sp13_S_contig646.17237.1|Name=mRNA_Ecto-sp13_S_contig646.17237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1024bp MRFPPKRTCRKSSCAAVAALAAIVLANLSVFSEACFRPSAVGARATTDAAback to top mRNA from alignment at Ecto-sp13_S_contig646:11598..20718- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig646.17237.1 ID=mRNA_Ecto-sp13_S_contig646.17237.1|Name=mRNA_Ecto-sp13_S_contig646.17237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9121bp|location=Sequence derived from alignment at Ecto-sp13_S_contig646:11598..20718- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig646:11598..20718- >mRNA_Ecto-sp13_S_contig646.17237.1 ID=mRNA_Ecto-sp13_S_contig646.17237.1|Name=mRNA_Ecto-sp13_S_contig646.17237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3072bp|location=Sequence derived from alignment at Ecto-sp13_S_contig646:11598..20718- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |