mRNA_Ecto-sp13_S_contig63440.17097.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 189 bits (481), Expect = 1.190e-53 Identity = 104/131 (79.39%), Postives = 113/131 (86.26%), Query Frame = 1
Query: 1 TPIHLSAERGFLSAVKALLAAGGDLSMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
TPIHLSA+RG LSAV+ALLAAGGD S+RYGK EAFSAL LA+ GGHVEVMQALIRHGVDV+A DSNG TALHSAA D V AI+TL+EAGANI+ QGG+ D AR TPLHMAS KG SEAALSLVKH ADVH
Sbjct: 117 TPIHLSAKRGSLSAVQALLAAGGDSSLRYGKGEAFSALGLAARGGHVEVMQALIRHGVDVDAPDSNGLTALHSAATGDAVGAIETLMEAGANIDAQGGE-DGARYTPLHMASEKGLSEAALSLVKHRADVH 246
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: D7G744_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G744_ECTSI) HSP 1 Score: 175 bits (444), Expect = 4.190e-49 Identity = 94/119 (78.99%), Postives = 99/119 (83.19%), Query Frame = 1
Query: 67 GDLSMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALH----------SAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
GD S+R GKDEAFS L LA+ GGHVEVMQALIRHG DVNA DSNGCTALH SAA+ DKV AIDTLIEAGANINVQGGKYD+ARSTPLHMAS+KGSSEAALSLVKH ADVH
Sbjct: 114 GDPSLRCGKDEAFSTLGLAARGGHVEVMQALIRHGADVNAPDSNGCTALHTXXXXXXXXXSAAIGDKVGAIDTLIEAGANINVQGGKYDDARSTPLHMASKKGSSEAALSLVKHRADVH 232
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: D7FHH2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH2_ECTSI) HSP 1 Score: 170 bits (431), Expect = 1.220e-46 Identity = 92/115 (80.00%), Postives = 98/115 (85.22%), Query Frame = 1
Query: 49 ALLAAGGDLSMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
ALL AGGD S RYGKD+AFSALSLA+ GHVEVMQALIRHGVDVNA DSNGCTALHSAAM D V AI+ LIEAGA IN QGG Y + R TPLHMAS +GSS+AALSLVKHGADVH
Sbjct: 160 ALLDAGGDSSFRYGKDKAFSALSLAARRGHVEVMQALIRHGVDVNAPDSNGCTALHSAAMGDTVGAINALIEAGAKINAQGGTYGK-RYTPLHMASERGSSKAALSLVKHGADVH 273
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: A0A6H5JT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT48_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.150e-44 Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 58 AAGGDLSMRYGKDEAFSALSLA-SSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTP-LHMASRKG 345
AAGGD S+RYGKDEA SAL LA SSGG+VEVMQALIRHGVDVNAHDSNGCTALHSAAM DKV AIDTLIEAGANINVQ GKYD+ARSTP LHMAS KG
Sbjct: 128 AAGGDPSLRYGKDEALSALGLAASSGGYVEVMQALIRHGVDVNAHDSNGCTALHSAAMGDKVGAIDTLIEAGANINVQRGKYDDARSTPPLHMASEKG 225
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: D8LJC1_ECTSI (Ankyrin repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC1_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.020e-42 Identity = 83/106 (78.30%), Postives = 91/106 (85.85%), Query Frame = 1
Query: 76 SMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
S+RYGK +AFSAL LA+ GGHVEVMQALIRHGVDVNA DSNGCTALHSAA+ D V AID LIEAGA+I+ QGG+ E TPLH+AS KGSSEAALSLVKHGADVH
Sbjct: 99 SLRYGKGKAFSALGLAARGGHVEVMQALIRHGVDVNAPDSNGCTALHSAAIGDAVGAIDVLIEAGASIDAQGGEDGEMY-TPLHVASEKGSSEAALSLVKHGADVH 203
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 155 bits (392), Expect = 2.400e-41 Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = 1
Query: 76 SMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
S+RYGK +AFSAL LA+ GGHVEVMQALIRHGVDV+ DSNGCTALHSAA+ D V AID LIEAGA+I+ QGG+ D AR TPLH+AS +GSSEAALSLVKHGADVH
Sbjct: 168 SLRYGKGKAFSALGLAARGGHVEVMQALIRHGVDVDGPDSNGCTALHSAAIGDAVGAIDVLIEAGASIDAQGGE-DGARYTPLHVASEQGSSEAALSLVKHGADVH 272
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: A0A6H5JN84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 123 bits (309), Expect = 3.830e-30 Identity = 71/112 (63.39%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 58 AAGGDLSMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
AAG D S+RYGKD+AFSAL LA+ GGHVEVMQALIRHGVDV+A DSN TALHS QGG+ D AR TPLHMAS KG SE ALSLVKH ADVH
Sbjct: 162 AAGEDSSLRYGKDKAFSALGLAARGGHVEVMQALIRHGVDVDAPDSNSLTALHSXXXXXXXXXXXXXXXXXXXXXAQGGE-DGARYTPLHMASEKGLSETALSLVKHRADVH 272
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: A0A6H5KSG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG6_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 9.680e-17 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 58 AAGGDLSMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQG 291
AAG DLS+R G D SAL A+ G V+V++A++RHGVDVNA DS G TALH+ A ++ AID L+EAGA++N +G
Sbjct: 56 AAGADLSLRSG-DNNESALETAAINGDVDVVRAMVRHGVDVNARDSQGLTALHAVAESNQAGAIDALVEAGAHVNARG 132
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: D7G181_ECTSI (Ankyrin repeat protein E4_8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G181_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 4.760e-15 Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 TPIHLSAERGFLSAVKALLAAGGDLSMRYGKDEAFSALSLASSGGHVEVMQALIRHGVDVNA-HDSNGCTALHSAAMWD-KVRAIDTLIEAGANINVQGGKYDEARSTPLHMASRKGSSEAALSLVKHGADVH 393
TP+ ++ G V+ALLAAG D S+R G FSAL LA++ GH V+ ALIRHGVDVN H +G S + + AI L+ AGA+ + + D T LH AS S EAA++L+K GAD++
Sbjct: 50 TPLDTASRDGNTEIVEALLAAGADASLRRGG--VFSALQLAAANGHALVLSALIRHGVDVNEWHRESGINYSPSHGRENIQPEAIAILVGAGASTH----ERDAGGGTSLHDASDDLSLEAAVALLKRGADIN 176
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Match: A0A6H5JK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK08_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.060e-14 Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 1 TPIHLSAERGFLSAVKALLAAGGDLSMRYGKDEAFSALSLASSGGHVEVMQALIRH-GVDVNAHDSNGCTALHSAAMWDKVRAIDTLIEAGANINVQGGKYDEARSTPLHMAS 336
+P+ ++AE G + ALL AG D +R+G++E SAL A S GH+ V++AL H GVDVNA D G TALH AA ++ A+ LI AGA++ Q D + TPLH A+
Sbjct: 289 SPLIVAAEHGARGTIDALLVAGADPDIRHGENE-LSALDSAVSHGHISVLKALAHHEGVDVNAVDPTGYTALHMAADNNQSSAVGVLIAAGADLESQ----DIHQWTPLHCAA 396 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig63440.17097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig63440.17097.1 >prot_Ecto-sp13_S_contig63440.17097.1 ID=prot_Ecto-sp13_S_contig63440.17097.1|Name=mRNA_Ecto-sp13_S_contig63440.17097.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp TPIHLSAERGFLSAVKALLAAGGDLSMRYGKDEAFSALSLASSGGHVEVMback to top mRNA from alignment at Ecto-sp13_S_contig63440:5..397+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig63440.17097.1 ID=mRNA_Ecto-sp13_S_contig63440.17097.1|Name=mRNA_Ecto-sp13_S_contig63440.17097.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig63440:5..397+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig63440:5..397+ >mRNA_Ecto-sp13_S_contig63440.17097.1 ID=mRNA_Ecto-sp13_S_contig63440.17097.1|Name=mRNA_Ecto-sp13_S_contig63440.17097.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig63440:5..397+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |