mRNA_Ecto-sp13_S_contig6324.17069.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: D7FLG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG3_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 3.760e-152 Identity = 422/478 (88.28%), Postives = 427/478 (89.33%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAALCSGEERLREVLGSLHAVEKAFVQHKDRQRLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESARMLDEVERSLGSAREEAGHLXXXXXXXXXXXXXXXXXXXXAKGNLETLKETSRCDKRELQARVDSLQDVLASAARSASHLPNA 1434
RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRD+ELGR+EAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRA+RERAEAQRAALTR EGELTLQLREVESRCADQARRRERA REAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAA+CSGEERLREVLGSLHAVEKAFVQHKDRQRLEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RMLD VERSLGSA XXXXXXXXXXXXXXXXXX AKG+LETLKETSRCDKRELQARVDSLQDVLASAARS SHLPNA
Sbjct: 181 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDVELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRASRERAEAQRAALTR----------------------------------EGELTLQLREVESRCADQARRRERAEREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAAVCSGEERLREVLGSLHAVEKAFVQHKDRQRLEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLDXVERSLGSAXXXXXXXXXXXXXXXXXXXXXXXXXEQAKGDLETLKETSRCDKRELQARVDSLQDVLASAARSTSHLPNA 624
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: D0N7X4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N7X4_PHYIT) HSP 1 Score: 114 bits (285), Expect = 3.140e-23 Identity = 91/274 (33.21%), Postives = 137/274 (50.00%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAALCSGEERLREVLGSLHAVEKAFVQHK 822
R+LE LL ++E + + KL+EDFK+NL L+E RD EL ++A LK LRD+E E SE + R E ++ R EQ+ ++Q K K + +++G RW ++E R + R + RQLRE+++D+E QR + FD +M+QR+ E + EL LRE+E + R + A ELK ++ + L+ +K + L W L D + + E E+L SLHAVEKAFVQ K
Sbjct: 43 RTLEALLRDKETAATAAKQKLSKLQEDFKYNLKLLEGRDEELALYDANFASLKNVLRDREAELSENRAREAELQAELQRMKQRTGEQEAHYQQKLKDAKAQLEGARWKFDDELRRQEDATGTLRRNIERQLREKDEDIENQRRELTVTFDDVMRQRETEFKRAIDELQGNLRELELKNKAMTRDTDAQRARAEELKTKNENLQVMLQENDKELKSLEWTLADVKAAKDVKIGEXXXXXXXXXXXXXXXXXXXXXXXAELLQSLHAVEKAFVQQK 316
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: A0A2R5GES0_9STRA (Proteasome assembly chaperone 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GES0_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.790e-20 Identity = 90/275 (32.73%), Postives = 133/275 (48.36%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAALCSGEERLREVLGSLHAVEKAFVQHKD 825
+SLE L ++ L + ++ KL EDF +NL LI DRD EL +F+ A +KE + DKE EASE++M++D+ AA R E + + + LR M+G R A E R R E A L +L+E++DDLEAQR + A +D + +QR + + + EL +E++ R Q + + +A EK + L WELED Q++ A E +L SLHAVE+AFVQ K+
Sbjct: 368 QSLERTLRGKDEQLRVAEEKFAKLSEDFNYNLQLIADRDAELDKFDTAFAKVKEIISDKEAEASELRMQIDDLEAQLEAAAVRARENEDAHERRLADLRTNMEGGRVALETRHRKERLALEEALAQLEHRLQEKDDDLEAQRREMAATYDELSRQRYRDYEHRIEELQNANKELQDRVKQQTEAQTXXXXXXXXXXXXXAELGAQFDASEKRCKQLVWELEDTQRLKDARIEXXXXXXXXXXXXXXXXXXXXXXXXXXLLSSLHAVEQAFVQQKE 642
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: A0A1V9YBR2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBR2_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.320e-19 Identity = 83/274 (30.29%), Postives = 140/274 (51.09%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAALCSGEERLREVLGSLHAVEKAFVQHK 822
R+LEG+L+E+EA +A ++ KL+EDFK+NL L+E RD EL ++ +K LRD+E E E++++L + + + EQ ++ K K R +++ RW+ ++ R ++ EA + R+LRE+++DLE R + FD +++ R+ E +A +L +LRE E + R + +WEL D + + A+ E +L+ +A L E ++ E+L SLHAVEKAF+Q K
Sbjct: 28 RTLEGMLKEKEAAMAGYKQKFYKLQEDFKYNLKLLEGRDEELALYDNNFATMKIVLRDRENEIGELRIQLADMTSDIKAEKQKHIEQDAFYNQKLKDARGQVEAARWSYDDAVRKQKDDFEAYKRRTERELREKDEDLEGLRREMTVTFDELLRARELEFKAATDDLQGKLRETELKAKSIGREVDTTKERNTXXXXXXXXXXXXXXXXXXXXXXXQWELSDVRGLKDAKIAELEADKVDLQQVKQALLDEYEGKMAELLQSLHAVEKAFLQQK 301
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: A0A7S2WNF5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WNF5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.120e-18 Identity = 83/283 (29.33%), Postives = 142/283 (50.18%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQ-------ALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAALCSGEERLREVLGSLHAVEKAFVQHKDR 828
RSLE L E+E+ L R+ KLKEDF++NL LIEDRD EL +++AA +K +RDKE E S++K+++ E ++A + NE +GY+ K K ++ MD +W+ E+ R +RE + Q+ + +D I +++ E Q K EL +RE+E++ + E +L++ +K R+ +++ EK ++ L W A E + +L + L E ++ ++L +LH VEK+ VQ K++
Sbjct: 114 RSLEQSLREKESQLEVQRERFSKLKEDFQYNLKLIEDRDTELTKYDAAFAQVKSVVRDKEGEVSDLKIQVAEVETQLKRATNKSNELEGYYSEKIKDMKATMDSSKWSLEDAMRRDRESFDVQKXXXXXXXXXXXXXXXXXXXXLSATYDEISRKKHLEHQRKVEELQAHVRELETKL-------DARGTEHGDLEDQNKTLRERVSDLEGSVQTLEKKNKSLHWXXXXXXXXXXARIAELEQETTKLSKVKQQILDEYETKMTQLLHTLHNVEKSVVQQKEQ 389
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: A0A3F2RUD4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUD4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 7.760e-18 Identity = 89/281 (31.67%), Postives = 138/281 (49.11%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEY-------EAALCSGEERLREVLGSLHAVEKAFVQHK 822
R+LE LL ++E + + KL+EDFK+NL L+E RD EL ++A LK LRD+E E SE++ R E ++A R +EQ+ +Q K K R +M+G RW + + FD +M+QR+ E + EL ++R++E + AR + A ELK ++ +Q L+ +K ++ L W L D + AA++ + GELE+E + L E ++ E+L SLH+VEKAFVQ K
Sbjct: 42 RTLEALLRDKETAANAAKQKLSKLQEDFKYNLKLLEGRDEELALYDANFASLKNVLRDREAELSELRAREAELQVELQRAKQRSDEQEVQYQQKLKDARAQMEGARWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSVTFDDVMRQRETEFKRTTDELQAKVRDLELKNKAMARDVDAQRARAEELKTKNENLQQMLQENDKEAKSLEWTLAD---VRAAKDA----KVGELEDEVVKLNEVKQKLLDEYESKMAELLQSLHSVEKAFVQQK 315
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: A0A662WKQ3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKQ3_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.410e-17 Identity = 90/281 (32.03%), Postives = 134/281 (47.69%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAA-------LCSGEERLREVLGSLHAVEKAFVQHK 822
R+LE LL ++E + + + KL+EDFK+NL L+E RD EL ++A LK LRD+E E SE++ R E ++ R EQ +Q K K R +M+G RW ++E + FD +M+QR+ E + EL + R++E + R + A ELK ++ +Q L+ +K S+ L W L D + AA++ + GELE E A L E ++ E+L SL AVEKAFVQ K
Sbjct: 44 RTLEALLRDKETAASGAKQQLSKLQEDFKYNLKLLEGRDEELALYDANFASLKNVLRDREAENSELRAREAELQAELQRMRQRTTEQDALFQQKLKDARAQMEGARWKFDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELTVTFDDVMRQRESEFKRVTDELQAKARDLELKHKAMTREGDAQRARAEELKLKNENLQQLLQETDKESKALEWTLAD---VRAAKDT----KVGELEKEVAALNEVKQKLLDEYESKMAELLQSLQAVEKAFVQQK 317
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: H3GG76_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG76_PHYRM) HSP 1 Score: 92.8 bits (229), Expect = 3.600e-16 Identity = 85/277 (30.69%), Postives = 133/277 (48.01%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELE--NEYEAALCSG-EERLREVLGSLHAVEKAFVQHK 822
R+LE LL ++E + + KL+EDFK+NL L+E RD EL ++A LK LRD+E E SE++ R E ++ R ++Q+ +Q K K R +M+G RW + + FD +M+QR+ E + EL + RE+E + AR + A E K ++ +Q L+ +K + + W L D + AA++ + E+E NE + L E ++ E+L SLH+VEKAFVQ K
Sbjct: 238 RTLEALLRDKETAANAAKQKLSKLQEDFKYNLKLLEGRDEELALYDANFASLKNVLRDREAELSEIRAREAELQAEVQRVKQRADDQETQYQQKLKDARAQMEGARWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSVTFDEVMRQRETEFKRMRDELQTKSRELELKNKALARDADAQRARADEQKTKNENLQQMLQENDKDMKSIEWTLAD---VRAAKDAKVGELEAEVEKLNEVKQKLLDEYESKMAELLQSLHSVEKAFVQQK 511
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: A0A8K1CMT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT4_PYTOL) HSP 1 Score: 87.0 bits (214), Expect = 2.430e-14 Identity = 80/274 (29.20%), Postives = 126/274 (45.99%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVESRCADQARRRERAAREAAELKESSKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAALCSGEERLREVLGSLHAVEKAFVQHK 822
R+LE LL E+E +++KL+EDFK+NL L+E RD EL ++ LK LRD+E E SE+K ++ + +Q R +EQ+ ++Q K K R +M+G RW ++E + FD +M+QR+ E + R E A ELK + ++ L EK ++ + W+L D + A+ E +L+ ++ L E ++ E+L SLH+VEKAFVQ K
Sbjct: 55 RTLETLLREKETAAHAYKQKFNKLQEDFKYNLKLLEGRDEELALYDTNFASLKNVLRDREAEISELKAQVADLQTDVKQEQKRASEQEVFFQQKLKDARAQMEGARWNFDDELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEITLTFDDVMRQREAEFXXXXXXXXXXXXXXXLKVKSTTRESEMAKERCEELKMKMENMQKMLNESEKEAKAMEWQLSDVRASKDAKIAELEDEILKLQEVKQSLLDEYEGKMAELLQSLHSVEKAFVQQK 328
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Match: UPI000B45E90B (coiled-coil domain-containing protein 57-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45E90B) HSP 1 Score: 75.9 bits (185), Expect = 1.990e-12 Identity = 57/176 (32.39%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 1 RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQGLKESLRDKEVEASEVKMRLDEALC-VNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRANRERAEAQRAALTRQLREREDDLEAQRADSAEAFDRIMQQRQEETQAKEGELTLQLREVE 525
++LE ++++ L + A++ KLKEDFK+NL ++E+RD EL ++ LK SL K E SE+K++LD+ +R+ ARE E Q ++Q + K + E+D R +++ E + R+ E + L R+L E++L+ QR + + FD +++R+ E + + E+ ++ E E
Sbjct: 2 QTLEAAYKDKDRQLQEEKAKFTKLKEDFKYNLKVLEERDKELETYDLTFSELKSSLNVKNGEMSEMKIKLDDMKTWSDRENQARE-ELQLHYQQRLKEKQAEIDSYRCSKDSELQQERKEFENFKRTLQRKLTXVEEELDTQRRELSAEFDDALKRREHEFRLQTDEMGTKVLEYE 176 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6324.17069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6324.17069.1 >prot_Ecto-sp13_S_contig6324.17069.1 ID=prot_Ecto-sp13_S_contig6324.17069.1|Name=mRNA_Ecto-sp13_S_contig6324.17069.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDLELGRFEAALQback to top mRNA from alignment at Ecto-sp13_S_contig6324:42..8346- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6324.17069.1 ID=mRNA_Ecto-sp13_S_contig6324.17069.1|Name=mRNA_Ecto-sp13_S_contig6324.17069.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6324:42..8346- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6324:42..8346- >mRNA_Ecto-sp13_S_contig6324.17069.1 ID=mRNA_Ecto-sp13_S_contig6324.17069.1|Name=mRNA_Ecto-sp13_S_contig6324.17069.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6324:42..8346- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |