mRNA_Ecto-sp13_S_contig6322.17067.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 4.250e-205 Identity = 293/303 (96.70%), Postives = 299/303 (98.68%), Query Frame = 1
Query: 151 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPA+TNYTQFICYDEVYP IF+NETGEVDI+EAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVS LVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMF GMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMK+++ F
Sbjct: 1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPATTNYTQFICYDEVYPEIFNNETGEVDIQEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSVLVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMF-GMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKLLILF 302
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK) HSP 1 Score: 296 bits (759), Expect = 1.080e-91 Identity = 166/358 (46.37%), Postives = 236/358 (65.92%), Query Frame = 1
Query: 1 MGYALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGN-------GVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDV-SESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM 1050
M Y L++KD+ +P N+ L+G DF C EK RKCTDILFLL+L A W AMT LGF+V G+IPND LEPGNP+RL+NGIDY G ICGV + V ++ IY+LPS + GVCV+ CP+ + TQF+C + FD+ +++ +AW V G C+YH ATT+I +YCV+D+ + AA+ A++ +A+ALN + N T +S + S+S+WF++ AD++TA+ +I GFG+GV+ +VG YL FLRIPGVLF+L WG++ + +L A V+ T+ +W A E P+IHSD E Y SY +F + +W LL+L RKRI++A+ ITK+ASRAV MK++
Sbjct: 1 MVYELNDKDRNDPANKKLEGGADFPG-PC---EK------RKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAVSDKSKIYYLPSVSTNSYGAIGVCVDSCPSERDLTQFVC-NYTIDSTFDSSDA-LEMAQAWRYVLQGQCMYHEATTDIFNYCVYDAALS----AASAAIDQVVASALNVSADNVTGLSYETDSDSSWFDNFTADLMTAKYVILGFGVGVAMVVGFIYLFFLRIPGVLFMLTWGIIGAITLVLLLAAVLCYTTATSW-ASESPQIHSDTEAKGLLYFSYALFV-VFGLWLLLILVLRKRIQLALRITKQASRAVAAMKLL 340
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA) HSP 1 Score: 289 bits (739), Expect = 3.670e-89 Identity = 148/353 (41.93%), Postives = 216/353 (61.19%), Query Frame = 1
Query: 7 YALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDE--VYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
Y LSE+DK NP N L+GSP FK +R+CTD+LF L+L A+WAAMT LG +V G+I + E GNPKRL+NGID +G ICGV V + + Y +PSG GVCV CP NY +F C ++ + +++ + E AW V+ GDC+Y+ A+T++ +YCVFD+ I + A A+A G + V+ + ++W D+ AD++ ++ L+ G LG SAL+ Y+ +R+P +LFLL+W G+ A+ GAG++L+ T++ W E EP+ HSD E A Y SY++FA + +WALL+LW RKRI AI +TKEA+RAVN M +++ F
Sbjct: 4 YELSERDKNNPHNAKLEGSPAFKV-----------GEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTA--------ASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFA-LGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFF 336
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK) HSP 1 Score: 286 bits (732), Expect = 2.400e-87 Identity = 159/354 (44.92%), Postives = 231/354 (65.25%), Query Frame = 1
Query: 7 YALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGN------GVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM 1050
Y +S+KDKE+PDN+ L+ S DF A C EK RKCTDILFLL++ A W AMT LGF+VTG IP+D L+ GNP+RL+NGIDYEG ICGV + V+ + IY+LP+ GVC++ CP++ + + FIC V + E+ E + VS+G+C+Y TT+I +YC++D+++D A+ AA +E E+ ++ N ++AN ++ S D S+ WF+D AD+ T + +I GFG+GV+ ++G YL LRIPGVLF+L WG++F + +L GV+ T+ W + H+ E N+ KY SY +FA + VW LLML RKRI++A+ ITKEAS+AV MK++
Sbjct: 55 YEMSDKDKEHPDNKKLEHSADF-AGPC---EK------RKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVKSKSKIYYLPAVGTTVSIAGVCIDSCPSTQDTSTFICKYNV--------SDELTTLEYYQEVSSGNCMYQEPTTDIFNYCIYDTLLDAAESAAYQTLE-EVMSSFNMSSANVSLSSDDSSD--WFDDFTADIYTGKYVIFGFGIGVALVIGFVYLFLLRIPGVLFMLTWGIIFSILFLLLIGGVLCYTTASDWADDSS---HTTTEANSLKYFSYFLFA-LTGVWLLLMLVLRKRIQLALKITKEASKAVASMKLL 383
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.670e-78 Identity = 139/321 (43.30%), Postives = 205/321 (63.86%), Query Frame = 1
Query: 118 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSES-------TWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
NRKCTD+L +L+L A W A T+LGFIV G+I N+ LE GNP RL+NG+DY+GR+CG+ + V+ ENIY+LPSG G+C+E CP +T+Y QF C PG E E D++ A+ +++AG C+YH+ATT++ +YC++D+V++ A + +E +A A NGT+ V + D+ ES WF+D AD+ A +I GFG G YL+ LR+PGVLFL+ WG++F V + G + +Q + W E+ HSD E Y Y++ A + V++ L +L RKRIK+A+ I KEAS+A++ MK++V F
Sbjct: 5 NRKCTDVLCMLLLIAVWFATTILGFIVCGVIENENLEAGNPWRLVNGVDYDGRVCGIDSGVKNEENIYYLPSGAGICIESCPTATDYKQFHCM----PG----EEPEDDLD-AYKKIAAGKCMYHVATTDVFNYCIYDAVLEAAQDVGAATLEQAIAAANNGTSD--AVAAGDIPESYFEPDEDNWFDDFTADLYKAIYVIFGFGXXXXXXXGFLYLILLRVPGVLFLMTWGIIFLVQLLWLVGGALCVQIGKAW---EDDNKHSDMESKGLLYFGYVLIA-IGVLFFLFILCMRKRIKLAVGIVKEASKAISAMKIIVLF 310
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: B8C1T3_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1T3_THAPS) HSP 1 Score: 179 bits (455), Expect = 6.810e-48 Identity = 113/325 (34.77%), Postives = 174/325 (53.54%), Query Frame = 1
Query: 121 RKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGV-------GTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDV-----SESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
R CTD+LFLL+L AW AMT +G TGLI ++ ++ G+P+RL+NG+DY ICGV G V Y LPSG VCVE CP+ TNY +F C E D + ++ A T S C+ ++ +T+ LSYC+ D + N N +T +S + S+S +F+ + D+ R +I FG G++ ++G +L+ +++PG L LL+W ++ V A L GAG +TS W + E E A Y SY+++ G+ V+W +++ + R+RI +AI KE++RA++ M VM F
Sbjct: 5 RTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANICGVTNYQTPLGADVINLPKAYPLPSGYFVCVERCPSVTNYDEFHCEYETV----DITNTKKSLQIAHT--SQKQCMPYIKSTSFLSYCIPD-----------------IPNVTTSNNETHTEISITMEDQINSQSDFFDKLMTDVYNVRYVIFYFGCGMAMVLGIVFLVVIQLPGFLSLLVWTMIIAVDASLIGAGWYTKETSLKWASSET---RGGNEAVALFYASYVLY-GLAVLWVMIICYIRRRIVLAIYCVKESARAISAMPVMTLF 302
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A8J2WZ97_9STRA (Choline transporter-like protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ97_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.190e-44 Identity = 123/385 (31.95%), Postives = 192/385 (49.87%), Query Frame = 1
Query: 16 SEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDG---LEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYD---EVYPGIFDNETG-EV-------DIEEAWTRVSAGD---------CLYHMATTNILSYCVFDSVIDLA----DEAATLAVEAE---------MANALNG-TNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
+E DK++P+N+ L DF C+ RKCTD+L L+L AW MT++G P +G L+ GNP +L+NGIDY+ R+CG+ + V++R +Y+LP+G+GVC+++CP N F C D E I +TG EV ++ + D C + T ++++YCV + +A D+AA A +A +A A T ++++ E + E ++ADM+ + I GFG + VG Y LRIPGVL L++WG++ V M QTS W +E+ + N YL+Y A +C +WA + RKRI +AI ITKEA++ + M +++ F
Sbjct: 23 TEDDKKDPNNKPLDVGKDFGGP--CK--------KRKCTDVLCTLLLAFAWFCMTVVGLACIPGSPIEGTMGLQKGNPYKLINGIDYKDRVCGIDSDVKDRLKLYYLPTGSGVCIKKCPEKQNAQAFHCTDDAQEKLDKIDRTQTGWEVLYVAKGFEMVKECNDPKCSDPQSLRRCQCCAPYYPTNDVMNYCVSEQAQAVAAAAGDQAAQQAADATKPCDPTPPPVAGATKAPTPLCGAALAAESQERDYTEKMYADMMVSMWYIFGFGFFGAIFVGFVYTFILRIPGVLALVVWGIIVAVGVFWLALAAMCYQTSVAWKQDED---RDANQANGMLYLAYFC-AALCALWACTICCLRKRIALAIGITKEAAKCIATMPIIIVF 393
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S4T9X0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T9X0_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.100e-43 Identity = 108/304 (35.53%), Postives = 165/304 (54.28%), Query Frame = 1
Query: 175 MTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQER-ENI------YFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNET---GEVDIEEAW-TRVSAG-------DCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAV 1032
MT +GF VTG+I ++ L GNP+RL+NG+DY G ICG+ V R EN+ YFLPSG +C+ CP N+ +F C E+ I G I+ A T+ S G C+ H+ TT L YC D I++ + + + AN T++N+T+V + + T+F+ AD T+R +I GFGLG + ++G +L+ ++ PGVL ++W ++ G++ L GAG + + S W A+ I D E+ +LS I + +W + + RKRI +AIA KEASRA+
Sbjct: 1 MTGVGFAVTGVIESNTLNKGNPERLVNGMDYHGNICGISNYVTSRGENVMNLPKAYFLPSGLTICIPSCPMEKNFDKFYCQYEIQAEIEQRVAIVAGNAGIDAANNTQKSLGLYYTSTKQCMPHLKTTPYLGYCRPDVPIEVVEGD----LNQKFANESLHTSSNFTIVQEE-PKGTFFDKAMADAKTSRYVIFGFGLGAAMILGLIFLVLIQTPGVLTTMVWSIVIGIFIGLIGAGHYMSRKSAIWMAQG---IRDDREIIGLFWLSRISYVA-SGLWFVTICCLRKRIVLAIACVKEASRAM 295
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S4TAG2_9STRA (Choline transporter-like protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAG2_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.730e-41 Identity = 109/309 (35.28%), Postives = 167/309 (54.05%), Query Frame = 1
Query: 175 MTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQER-ENI------YFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNET---GEVDIEEAW-TRVSAG-------DCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKV 1047
MT +GF VTG+I ++ L GNP+RL+NG+DY G ICG+ V R EN+ YFLPSG +C+ CP N+ +F C E+ I G I+ A T+ S G C+ H+ TT L YC D I++ + + + AN T++N+T+V + + T+F+ AD T+R +I GFGLG + ++G +L+ ++ PGVL ++W ++ G++ L GAG + + S W A+ I D E+ +LS I + +W + + RKRI +AIA KEASRA+ M +
Sbjct: 1 MTGVGFAVTGVIESNTLNKGNPERLVNGMDYHGNICGISNYVTSRGENVMNLPKAYFLPSGLTICIPSCPMEKNFDKFYCQYEIQAEIEQRVAIVAGNAGIDAANNTQKSLGLYYTSTKQCMPHLKTTPYLGYCRPDVPIEVVEGD----LNQKFANESLHTSSNFTIVQEE-PKGTFFDKAMADAKTSRYVIFGFGLGAAMILGLIFLVLIQTPGVLTTMVWSIVIGIFIGLIGAGHYMSRKSAIWMAQG---IRDDREIIGLFWLSRISYVA-SGLWFVTICCLRKRIVLAIACVKEASRAMAAMPI 300
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI) HSP 1 Score: 157 bits (396), Expect = 3.370e-39 Identity = 109/356 (30.62%), Postives = 177/356 (49.72%), Query Frame = 1
Query: 43 NEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLP-SGNGVCVEECPASTNYTQFI-CYDEVYPGIFDNE-----------TGEVDIEEAWTRVS-------AGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM 1050
N V + + + + + +R+CTD+LF+L+L AW AMT LG DG+ GNP LLNGIDY+GRICGV V+++ +Y++ G GVCVEECP TN+ C DE + G +E + D++ AG C+Y + + + + CVF S ++ D+ + V DV+ + ++ +D+ ARG I GFG S ++G YL L++PG++ ++IWG + V+ IL G + SE W + E H+D +V ++ Y+ + G ++ L+++ RK+I +A I KE+ RA+ +K+M
Sbjct: 4 NSVTPKEGEKRGAKLAAPDDIEGGADRRCTDVLFMLVLILAWLAMTYLGV--------DGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTNFDHLWGCTDE-FSGFTVDEGYDCSDDPLECAAKADVDPTGAEDGGFGGGDGAGVCMYQVESVDFVGRCVF-SEPEVLDK--------------------FVDVGGDVA---YLQEAASDVYAARGWIFGFGFCFSTILGFFYLGMLQLPGLVCMMIWGSIACVFFILVAMGFGFVSLSEDWEGDGE---HTDTQVMGSRVTGYLAY-GCAFLFLCLIVFLRKQIALANGIIKESVRAIGTVKMM 322 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6322.17067.1 >prot_Ecto-sp13_S_contig6322.17067.1 ID=prot_Ecto-sp13_S_contig6322.17067.1|Name=mRNA_Ecto-sp13_S_contig6322.17067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=353bp MGYALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLback to top mRNA from alignment at Ecto-sp13_S_contig6322:3212..7887+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6322.17067.1 ID=mRNA_Ecto-sp13_S_contig6322.17067.1|Name=mRNA_Ecto-sp13_S_contig6322.17067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4676bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6322:3212..7887+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6322:3212..7887+ >mRNA_Ecto-sp13_S_contig6322.17067.1 ID=mRNA_Ecto-sp13_S_contig6322.17067.1|Name=mRNA_Ecto-sp13_S_contig6322.17067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6322:3212..7887+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |