mRNA_Ecto-sp13_S_contig62917.17031.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 108 bits (270), Expect = 4.120e-29 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGSASLCRYL 204
M GY+ S DDSKL+ELMDIL F +EWRASLEA+ GDG WKAHFITD+ WTD RVCILG+ +CRYL
Sbjct: 1 MVGYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYL 68
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 111 bits (278), Expect = 6.370e-29 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 1 MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGSASLCRYLF 207
M GY SADDSKLE LMDILRF +EWRASLEA+ GD WKAHFITD+SWTDIRVCILG+ S+CRYLF
Sbjct: 53 MVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLF 119
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.030e-27 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 1 MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGSASLCRYLF 207
M Y+ SADDSKLEE+MDIL +EWRASLEA+ GDG WKAHFITD+SWTDIRVCILG+ S+CRY+F
Sbjct: 443 MVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVF 511
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 5.850e-26 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 1 MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGSAS 189
M GY+ SAD SKLE LMDILRF +EWRASLEA+ GDGTW+AHFITD+SWTDI+VCILG+ +
Sbjct: 1 MVGYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 108 bits (270), Expect = 5.860e-26 Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = 1
Query: 4 AGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGSASLCRYLF 207
AGY++SADDSKLEEL++++RF ++WR+SL+ K GD TWK HFIT++SWTDIRVCILG S+CRYLF
Sbjct: 567 AGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLF 634
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.050e-25 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 1 MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGS 183
M GY+ SADDSKLEELMDILRF +EWRASLEA+ G WKA+FITD+SWTDIRVCILG+
Sbjct: 40 MVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGT 100
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.930e-20 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query: 1 MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYS 150
MAGY+ SADDSKLEELMDILRFL EWRASLEA++ GD WKAHFITD+S
Sbjct: 1 MAGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 2.840e-15 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 7 GYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSWTDIRVCILGSASLCRYLF 207
GY+T AD L L++IL F + W+ SLEA P + W HFITDYSWTD+R ILG ++CRY+F
Sbjct: 492 GYITGADSPLLGRLLEILEFFDSWQVSLEAHFGPKE--WANHFITDYSWTDMRTTILGFVAMCRYVF 556
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Match: A0A6H5JS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS87_9PHAE) HSP 1 Score: 50.8 bits (120), Expect = 4.430e-6 Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 2
Query: 65 FWRSGGPRWRLRRNRATAPGRRTSSPTTRGPTSG 166
F+ GGPRWRL R ATAPGRRTSSPTTRG TSG
Sbjct: 22 FFDDGGPRWRLDRRWATAPGRRTSSPTTRGSTSG 55 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62917.17031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig62917.17031.1 >prot_Ecto-sp13_S_contig62917.17031.1 ID=prot_Ecto-sp13_S_contig62917.17031.1|Name=mRNA_Ecto-sp13_S_contig62917.17031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp MAGYVTSADDSKLEELMDILRFLEEWRASLEAKAKPGDGTWKAHFITDYSback to top mRNA from alignment at Ecto-sp13_S_contig62917:93..299- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig62917.17031.1 ID=mRNA_Ecto-sp13_S_contig62917.17031.1|Name=mRNA_Ecto-sp13_S_contig62917.17031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62917:93..299- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig62917:93..299- >mRNA_Ecto-sp13_S_contig62917.17031.1 ID=mRNA_Ecto-sp13_S_contig62917.17031.1|Name=mRNA_Ecto-sp13_S_contig62917.17031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62917:93..299- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |