mRNA_Ecto-sp13_S_contig6285.17026.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: D7FKX3_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX3_ECTSI) HSP 1 Score: 766 bits (1979), Expect = 3.880e-276 Identity = 387/413 (93.70%), Postives = 395/413 (95.64%), Query Frame = 1
Query: 1 IFSGKSWQTVAKVHRDAYGVSGTLVAIATYVSGETDSLDNAVYALDLVAMMAGGRFQGVANTFVEAMEADSFSKPDLAP-RVGAAQSLSSAVSPVATRAASAPDESRPKKAKSDRAMVTGRPGSGGGIRRITMPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTSRNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRRTL 1236
+ SGKSWQTVAKVHRDAYGVSGTLVAIATY+SGE DSLDNAVYALDLVAMMAGGRFQGVANTFVEAMEADSFSK DLAP RVGAAQS SS V+PVATRAAS PD RPKKAK DR+M TGRPGSGGGIRRI MPPLDVFRRDYMQ +TPVILSGVLDGWPAMG SR+WSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTG+RGEGSFPGGVAK TSCGEK KEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEED+GDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKR VLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRRTL
Sbjct: 85 LHSGKSWQTVAKVHRDAYGVSGTLVAIATYISGEADSLDNAVYALDLVAMMAGGRFQGVANTFVEAMEADSFSKTDLAPPRVGAAQSPSSGVAPVATRAASVPDGVRPKKAKRDRSMATGRPGSGGGIRRIIMPPLDVFRRDYMQAETPVILSGVLDGWPAMGASRSWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGERGEGSFPGGVAKNTSCGEKGKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDHGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKR--VLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRRTL 495
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A6H5KC06_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC06_9PHAE) HSP 1 Score: 521 bits (1343), Expect = 5.890e-183 Identity = 252/259 (97.30%), Postives = 255/259 (98.46%), Query Frame = 1
Query: 460 VLDGWPAMGTSRNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRRTL 1236
V+DGWPAMG SRNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTD KGCSDTGD+GEGSFPGGVAKKTS GEK KEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEED+GDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRRTL
Sbjct: 15 VVDGWPAMGASRNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDNKGCSDTGDQGEGSFPGGVAKKTSFGEKGKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDDGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRRTL 273
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: G4YJY8_PHYSP (JmjC domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJY8_PHYSP) HSP 1 Score: 255 bits (651), Expect = 1.270e-78 Identity = 132/281 (46.98%), Postives = 178/281 (63.35%), Query Frame = 1
Query: 394 MPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTS----RNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALL-LEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWG 1221
MP L+ FRRD M PV+++G ++ WPA+G + R W N YL++VAGRRTVPVE+G SY G+ W QELMT+ +F+ R I + S +++ D K + S++ YLAQH+LFDQIPAL RDI+TPDYC + +E ED+G+ E + N+WFGP GTVSPLH DP N+L QVVG K + + S +YP GL+SNTS+V +PD ++P F+ +EC LR+GE+LYIPP +WH++ SL TSFSVSFWW
Sbjct: 1 MPALEQFRRDVMLQNGPVVITGAMEFWPALGRAVGPDRAWKNLRYLRRVAGRRTVPVEIGSSYLGDDWGQELMTLNEFLDRHIIAPSDKDA--DGKPAA-----------------------SRKLGYLAQHRLFDQIPALGRDIVTPDYCTVKRVEGTEDDGEEEDITINSWFGPGGTVSPLHFDPKDNVLCQVVGAKYLRLYAPEE--SDKLYPIEGLLSNTSQVQVEDPDHEQFPEFRRAK-YVECVLREGEMLYIPPKYWHYVRSLSTSFSVSFWWS 253
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A4D9CNG3_9STRA (JmjC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNG3_9STRA) HSP 1 Score: 261 bits (667), Expect = 4.700e-78 Identity = 169/439 (38.50%), Postives = 234/439 (53.30%), Query Frame = 1
Query: 1 IFSGKSWQTVAKVHRDAYGVSGTLVAIATYVS----GETDS--------------LDNAVYALDLVAMMAGGRFQGVANTFVEAMEADSFSKPDLAPRVGAAQSLSSAVSPVATRAASAPDESRPKKAKSDRAMVTGRPGSGGGIRRITMPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTSRNWSNPSYLKKVAGRRTVPVELG-GSY-TGEG--------WRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDNGDAES-VATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWGKRR 1230
+ S +W+ V R Y S ++A V +TD+ L + +D+ +M +GVAN +E E Q L A + S E R K+ + +V GG+ R+ P L F +M + PVIL+ ++ WPA+ R W + YLK+VAG R VPVE+G G+Y GEG W QELM +GDFI R++ E P ++G + +G G ++ G + + G K+ +AYLAQH+LF+QIPAL++D+ PDYCAL +E E+ + + V TNAWFGP GTVSP H DP+HNLLAQVVG+K +V L SA +YP GL+ N S VD PDL+++P F C L +GE+LYIPPL+WHHI++L SFSVSFWWG+RR
Sbjct: 66 LHSSPAWRDVTVTTRRVYAYSQFILAAVQAVKFQQEEDTDTNTSTQKRSSVVSTRLKECIRRIDMALLMGPPSIKGVANGLIEWAE----------------QRLRPCKPEAAQFSTSRRRELRVKRPRPVEGLV-------GGLPRLACPSLHAFLEKHMVPQVPVILTQCMEHWPAL---RRWKDMDYLKEVAGERVVPVEVGSGTYMAGEGEGLEEDGAWGQELMPLGDFIDRYMTG--AESGPESREGDASSGGPGGQTWADG-GEVEAAGRKTGRRAYLAQHELFEQIPALQKDVWVPDYCALEVEGGEEALEEDGLVVTNAWFGPGGTVSPTHTDPYHNLLAQVVGSK--AVRLFAPSESAFLYPCQGLLRNNSRVDPLRPDLARFPLFARARS-QTCVLEEGEMLYIPPLWWHHIQALSPSFSVSFWWGRRR 472
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A2D4BRA3_PYTIN (JmjC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRA3_PYTIN) HSP 1 Score: 253 bits (645), Expect = 3.650e-76 Identity = 136/286 (47.55%), Postives = 166/286 (58.04%), Query Frame = 1
Query: 379 IRRITMPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTSRNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDNG-----DAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWG 1221
I RI MP L FR YM +PVI++G +D WPAMGT R+W + SY+++V G RTVP+E+G SY + W Q+LMT+ FI RF+E S S+E YLAQH LF+QIPAL RDIMTPDYC + +E + D E +A NAWFGP GTVSPLH DP NLL QVVG K V L S +YP GL+SNTS+VD NPDL +P F + + L+ GE+LY+PP WH I SL TSFSVSFWW
Sbjct: 118 IPRIPMPSLQQFRDCYMLINSPVIITGGMDHWPAMGTERSWEDLSYIRRVCGHRTVPIEIGSSYLEDDWGQQLMTVNAFIDRFLEPSSP--------------------------------RSSREIGYLAQHHLFEQIPALARDIMTPDYCTIRRSEEAEGEXNLDVDDEDLAVNAWFGPEGTVSPLHFDPKDNLLCQVVGAKY--VRLYAPSESEKLYPVEGLLSNTSQVDVENPDLEAFPLFIDAS-YQDAVLQAGEMLYLPPRHWHFIRSLSTSFSVSFWWS 368
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A8K1CBG5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBG5_PYTOL) HSP 1 Score: 253 bits (645), Expect = 1.200e-75 Identity = 156/409 (38.14%), Postives = 215/409 (52.57%), Query Frame = 1
Query: 16 SWQTVAKVHRDAYGVSGTLVAIATYVSGETDSLDNAVYALDLVAMMAGGRFQGVANTFVEAMEADSFSKPDLAPRVGAAQSLSSAVSPVATRAASAPDESRPKKAKSDRAMVTGR--PGSGGGIRRITMPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTS---RNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALL--LEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWG 1221
SW+ + V R A+G + L A A ++G + ++ + LD+ MMAG + + E + + A A+ RP+ A D+ + P I RI MP L Y++T TPVI++G ++ WPAMG + R W N YL+++AG RTVPVE+G SY + W Q+LMT+ +FI +++ Q+ES +K YLAQH LFDQIPAL RDI+TPDYC + L+DEE + E +A NAWFGP GTVSPLH DP NLL QVVG K + S +YP GL+SNTS+V +PDL +P F + +EC L++GE+LYIPP +WH+++SL SFSVSFWW
Sbjct: 61 SWKEIHAVWRQAFGYAAVLNAHA--LAGREEHTES-LKTLDMCLMMAGPHAPSNVHKLIAIAEEQLRNVDESAESEHTAK--------------------RPRLAGPDQLGLVQENFPVLKFSIERIEMPSLADLEHKYIRTNTPVIITGAMENWPAMGRADPTRAWRNLDYLRRIAGFRTVPVEIGSSYVEDDWGQQLMTLNEFIDKYLLEQGQDES-------------------------------TKRLGYLAQHHLFDQIPALGRDIITPDYCTIQRSLDDEESD---EDIAVNAWFGPKGTVSPLHFDPKDNLLCQVVGAKYLRLYAPSE--STKLYPVDGLLSNTSQVTVEDPDLDTFPLFADAK-YVECVLQEGEILYIPPTYWHYVKSLSVSFSVSFWWS 409
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A6A3UEU5_9STRA (JmjC domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UEU5_9STRA) HSP 1 Score: 251 bits (642), Expect = 2.910e-75 Identity = 161/420 (38.33%), Postives = 221/420 (52.62%), Query Frame = 1
Query: 16 SWQTVAKVHRDAYGVSGTLVA---IATYVSGETDSLDNAVYALDLVAMMAGGRFQGVANTFV---------EAMEADSFSKPDLAP--RVGAAQSLSSAVSPVATRAASAPDESRPKKAKSDRAMVTGRPGSGGGIRRITMPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTS----RNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWG 1221
SW++V V R A+G++ L A + + S E + LD+ MMAG + + E +EA F KP LA RVG AP+ + P +RR+ MP L+ FRR+ M PV+++G ++ WPA+G + R W + L++VAGRRTVPVE+G SY G+ W QEL+T+ +F+ R I +P+DK VA SK+ YLAQH+LFDQIPAL RDI+TPDYC + + + DAE + N+WFGP GTVSPLH DP N+L QVVG K + + S +YP GL+SNTS+V +PD ++P F+ +EC L +GE+LYIPP +WH++ SL TSFSVSFWW
Sbjct: 58 SWKSVLPVWRQAFGLASVLQASCLLRRHQSAECLEM------LDMCLMMAGPLAPPQTHALIARVEQQLEDEEIEARHFKKPRLAEVERVG--------------DKVEAPELTFP-------------------VRRLEMPTLEQFRREVMLRNEPVVITGAMEFWPALGRAAGPDRAWKDLRCLRRVAGRRTVPVEIGSSYLGDDWGQELITLNEFLDRHI-------APSDKD----------------VA--------SKKLGYLAQHRLFDQIPALGRDIITPDYCTVQRVEGGGDDDAEDITVNSWFGPGGTVSPLHFDPKDNVLCQVVGAKYLRLYAPEE--SDKLYPIEGLLSNTSQVQVEDPDDEQFPEFRRAK-FVECVLLEGEMLYIPPKYWHYVRSLSTSFSVSFWWS 404
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A421FAI8_9STRA (JmjC domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAI8_9STRA) HSP 1 Score: 247 bits (631), Expect = 5.400e-74 Identity = 132/285 (46.32%), Postives = 173/285 (60.70%), Query Frame = 1
Query: 379 IRRITMPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTS----RNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALL-LEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWW 1218
IRR+ MP L+ FRRD M PVI++G ++ WPA+G R W + YL++VAG RTVPVE+G SY G+ W QELMT+ +F+ R I + TD A +T E ++ YLAQH+LFDQIP L RDI+TPDYC + +ED E+ E + N WFGP TVSPLH DP N+L Q+VG K + + S+ +YP GL+SNTS+V NPD ++P F +EC LR+GE+LYIPP +WH++ SL TSFSVSFWW
Sbjct: 113 IRRLEMPTLEEFRRDVMLNNAPVIITGAMEFWPALGREAGLDRAWKDLRYLRRVAGWRTVPVEVGSSYLGDDWGQELMTVNEFLDRHIIPPLLTKENTDP------------------ATETGQPEDGEKLGYLAQHRLFDQIPVLGRDIITPDYCTVQRIEDGEEED--EDITVNGWFGPGRTVSPLHFDPKDNVLCQIVGAKYLRLYAPEE--SSKLYPVEGLLSNTSQVQVENPDDVQFPNFCRAK-YVECVLREGEMLYIPPTYWHYVRSLSTSFSVSFWW 374
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: A0A1X7UMR2_AMPQE (JmjC domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UMR2_AMPQE) HSP 1 Score: 249 bits (635), Expect = 5.570e-74 Identity = 132/276 (47.83%), Postives = 170/276 (61.59%), Query Frame = 1
Query: 397 PPLDVFRRDYMQTKTPVILSGVLDGWPAMGTSRNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDE--EDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWW 1218
P L F+ DYM+ + PV++ G ++ WPAM ++R WS Y+K VAG RTVP+E+G YT E W+Q+LM+IGDFI +FI S+E+ E K K YLAQHQLFDQIP LR+DI PDYC L L + D ++ V+ NAWFGP GT+SPLH DP HNLLAQV+G K + L + + +YP L++NTS+VDA PDL+ +P F + PL EC L G+VLYIPP WH++ SL SFSVSFWW
Sbjct: 183 PSLLHFKEDYMKKEKPVLIKGCINHWPAM-SNRQWSI-DYIKSVAGARTVPIEVGLRYTDENWKQDLMSIGDFIDKFILLESEEK------------------------------EGEKAKGYLAQHQLFDQIPELRKDICIPDYCCLSLNESAPSDAASSDDVSINAWFGPKGTISPLHFDPQHNLLAQVIGEKY--IKLYSPEDTPLLYPHETLLTNTSKVDAEFPDLNTFPLFSKATPL-ECHLTAGDVLYIPPKHWHYVRSLTVSFSVSFWW 423
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Match: D0MSD2_PHYIT (JmjC domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MSD2_PHYIT) HSP 1 Score: 243 bits (619), Expect = 6.740e-74 Identity = 126/280 (45.00%), Postives = 171/280 (61.07%), Query Frame = 1
Query: 394 MPPLDVFRRDYMQTKTPVILSGVLDGWPAMGTS----RNWSNPSYLKKVAGRRTVPVELGGSYTGEGWRQELMTIGDFIGRFIESHSQEESPTDKKGCSDTGDRGEGSFPGGVAKKTSCGEKSKEKAYLAQHQLFDQIPALRRDIMTPDYCALLLEDEEDNGDAESVATNAWFGPAGTVSPLHNDPFHNLLAQVVGTKRASVLLVDRKLSAAVYPRPGLMSNTSEVDAANPDLSKYPRFKEIMPLMECELRKGEVLYIPPLFWHHIESLETSFSVSFWWG 1221
MP L+ FRR M PV+++G ++ WPA+G + R W + YL+++AG RTVPVE+G SY G+ W QELMT+ +F+ R I P +A++ ++ YLAQH+LFDQIPAL RDIMTPDYC ++ +ED GD E + N WFGP GTVSPLH DP N+L QVVG+K + + S +YP GL+SNTS V +PD ++P+F+ +EC L +GE+LYIPP +WH+++SL TSFSVSFWW
Sbjct: 1 MPTLEEFRRTVMLQNKPVVITGAMEFWPALGRAAGPERAWKSVEYLRRIAGLRTVPVEIGSSYLGDDWGQELMTLNEFLDRHI-------------------------IPP-LAEENDHPVSPRKLGYLAQHRLFDQIPALGRDIMTPDYCT--VQRDEDAGDEEDITINCWFGPGGTVSPLHFDPKDNVLCQVVGSKYLRLYAPEE--SDKLYPIEGLLSNTSLVQVEDPDDERFPKFRNAR-YVECVLHEGEMLYIPPKYWHYVKSLFTSFSVSFWWS 249 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6285.17026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6285.17026.1 >prot_Ecto-sp13_S_contig6285.17026.1 ID=prot_Ecto-sp13_S_contig6285.17026.1|Name=mRNA_Ecto-sp13_S_contig6285.17026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp MMAGGRFQGVANTFVEAMEADSFSKPDLAPRVGAAQSLSSAVSPVATRAAback to top mRNA from alignment at Ecto-sp13_S_contig6285:5383..8283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6285.17026.1 ID=mRNA_Ecto-sp13_S_contig6285.17026.1|Name=mRNA_Ecto-sp13_S_contig6285.17026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2901bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6285:5383..8283- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6285:5383..8283- >mRNA_Ecto-sp13_S_contig6285.17026.1 ID=mRNA_Ecto-sp13_S_contig6285.17026.1|Name=mRNA_Ecto-sp13_S_contig6285.17026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6285:5383..8283- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |