mRNA_Ecto-sp13_S_contig6255.16981.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6255.16981.1
Unique NamemRNA_Ecto-sp13_S_contig6255.16981.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: D7FLY9_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY9_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 1.410e-134
Identity = 193/208 (92.79%), Postives = 197/208 (94.71%), Query Frame = 1
Query:   34 SGEVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLLTPRENCPAAVLANT 657
            SGEVFLWEKSAAG FAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACA DL RREG+MSGLFRGIESTMLREMLQCAIYYPSYEVTKDL+ RRSTSGKSSVPEP LQMLAGGIAGCATWLPPVYCLDVIKTR+Q AEPGVY G+WDCLRKTVRSEGTPVL RGLGLSMLRAFPMHGLVFVGYE TIGLLT RENCP AVLANT
Sbjct:   52 SGEVFLWEKSAAGFFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAADLVRREGVMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLLARRSTSGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRLQSAEPGVYGGTWDCLRKTVRSEGTPVLFRGLGLSMLRAFPMHGLVFVGYETTIGLLTTRENCPTAVLANT 259          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: D7FM07_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM07_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 3.200e-80
Identity = 129/200 (64.50%), Postives = 151/200 (75.50%), Query Frame = 1
Query:   40 EVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLL--TPRENC 633
            ++ L EK  AG +AG MN+P R VF+RVK VMQVR G    +PYSWSGAC VDL RREGI  GL RG+ +TMLRE LQ  IYYPSYE+ KD  +    +  ++VPEP+L  LAGG+AGC  WLPP+YCLDVIKTR+Q AEPGVYRG  DCL KT+R+EG PVL RGLG +MLRAFPMHGLVF+GYE TI LL   PR +C
Sbjct:   24 KLTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGIAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYFLPPDRTS-TAVPEPILLALAGGLAGCVMWLPPIYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPRSSC 222          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: A0A6H5JUA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA4_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 3.630e-79
Identity = 129/200 (64.50%), Postives = 151/200 (75.50%), Query Frame = 1
Query:   40 EVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLL--TPRENC 633
            E+ L EK  AG +AG MN+P R VF+RVK VMQVR G    +PYSWSGAC VDL RREG+  GL RG+ +TMLRE LQ  IYYPSYE+ KD ++    +  ++VPEP+L  LAGG+AGC  WLPP YCLDVIKTR+Q AEPGVYRG  DCL KT+R+EG PVL RGLG +MLRAFPMHGLVF+GYE TI LL   PR +C
Sbjct:   99 ELTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGVAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYLLPPDRTS-TAVPEPMLLALAGGLAGCVMWLPPTYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPRSSC 297          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: A0A836C8G7_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.370e-56
Identity = 101/187 (54.01%), Postives = 128/187 (68.45%), Query Frame = 1
Query:   55 EKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLL 615
            E + AG +AGA+ +P R VF+RVK VMQVR G G  APYSWSGAC VDL R EG+  GLFRG+ S  +RE+ Q A+YYP+Y+V K  ++     G  S   P+  +LAGGIAG   WLPP+Y +DV+KT+IQ A PG Y+   D  RKTV +EGT  L RGLG S++RAFP+H  +F GYE T+  L
Sbjct:   66 EMTLAGAWAGAVQAPARQVFERVKGVMQVRNGAGGKAPYSWSGACLVDLVRTEGVQMGLFRGMGSQFIREVPQFALYYPAYDVAKRAIL--PADGHIS---PIHMLLAGGIAGTVQWLPPIYNIDVLKTKIQTAAPGTYKSIADAARKTVATEGTKGLFRGLGPSLVRAFPLHATIFAGYELTMAHL 247          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: W7TE76_9STRA (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE76_9STRA)

HSP 1 Score: 195 bits (495), Expect = 5.580e-55
Identity = 100/219 (45.66%), Postives = 138/219 (63.01%), Query Frame = 1
Query:   40 EVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRA--APYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVT----KDLMVRRSTSGKS-------------SVP-EPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLLTPRENCP 636
            E+ L E +A+G +AG + SP R +F+R+K+VMQVR   G A   PY WSG C V L R+EG+ +GLFRG+++T LRE+ Q A+YYP YE+     + +M   + SG S             S P  P L +LAGG+AG   WLPP YCLDV+K+R+Q A PGVY   WDC +K+ + EG  V  RGL ++++RAFP++  +F+GYE T+  L   E  P
Sbjct:   47 ELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSXNESNIVHRKPSSSTPLPPHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAALHQEEEIP 265          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: A0A4D9D591_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D591_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.570e-45
Identity = 85/188 (45.21%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  133 MQVRVGNGRA--APYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVT----KDLMVRRSTSGKSSVPE--------------PVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLLTPRENCP 636
            MQVR   G    APY WSG C V L R+EG+ +GLFRG+++T LRE+ Q A+YYP YE+     + +M   + SG SS  +              P L +LAGG+AG   WLPP YCLDV+K+R+Q A PGVY   WDC +K+ + EG  V  RGL ++++RAFP++  +F+GYE T+  L   E  P
Sbjct:    1 MQVRKAAGGVDKAPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSSHEKNRVNRKPSSSTPLPPHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAALHQEEEIP 188          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: A0A6H5K324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K324_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.390e-40
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 1
Query:  199 LARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRI 447
            ++R EGIMSGLF GIESTML EMLQCAIYYPSYEVTKDL++RRS +GKSSVPEP LQMLAGGIAGCATWLPPVYCLDVIKTRI
Sbjct:   93 VSRTEGIMSGLFPGIESTMLGEMLQCAIYYPSYEVTKDLLIRRSRTGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRI 175          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: A0A482SEK8_9ARCH (MC/SLC25 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEK8_9ARCH)

HSP 1 Score: 147 bits (370), Expect = 1.270e-37
Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   40 EVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLR 534
            E+   + S AG + G + SP R + +R+K+VMQ+   +G  +PYSWSGACA  L + EG+  GLF+G  S +LRE+ Q ++YYP YE  K +   +      +V       LAGG AG   WLPP+YC DVIK+R+Q A  G Y G  DC R+  ++ G+ V  R
Sbjct:   43 ELGYADLSMAGAYTGVLQSPARQLVERIKSVMQIHERSGGKSPYSWSGACAYHLVKTEGVRVGLFQGFSSVLLREIPQFSVYYPCYEFAKSIYTEKIPDNPKTV-----NFLAGGTAGVVQWLPPIYCFDVIKSRMQTAPKGAYSGLMDCARQLYQAHGSSVFFR 202          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: K8Z8A3_NANGC (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8A3_NANGC)

HSP 1 Score: 149 bits (376), Expect = 1.510e-37
Identity = 81/201 (40.30%), Postives = 117/201 (58.21%), Query Frame = 1
Query:   40 EVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRA--APYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLLTPRENCP 636
            E+ L E +A+G +AG + SP R +F+R+K+VMQVR   G A   PY WSG C  ++  R               L++M+  +    S     ++ V R  S  + +P P L +LAGG+AG   WLPP YCLDV+K+R+Q A PGVY   WDC +K+ + EG  V  RGL ++++RAFP++  +F+GYE T+  L   E  P
Sbjct:   97 ELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLYEMNVRA--------------LQKMMAASNASGSSSNESNI-VHRKPSSSTPLP-PHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAALHQEEEIP 281          
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Match: A0A7S1G657_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G657_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.030e-32
Identity = 82/218 (37.61%), Postives = 118/218 (54.13%), Query Frame = 1
Query:    1 RRRKEDEGGGGSGEVFLWEKSAAGLFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGIAGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRGLGLSMLRAFPMHGLVFVGYEATIGLLTPRENCPAAVLAN 654
            RRR  +  GG   E+ + E  AAG  AG +++  R   +RVK VMQVR        +  S  C V   R EG++S    G  +T+LRE+ Q   Y+P++E+TK  +      G S+  +    ++AGG+AG   WLPP+YC+DV+K+R++V   G   G    LR +V  EG  VLLRG+G +M+RAFPMH  +    E     L+  E    A  A+
Sbjct:  133 RRRNAEAAGGVDRELSMEESMAAGAVAGVVSTVLRAPVERVKAVMQVRRNPDGTKVFRNSWRCLVGTMRTEGLLSPFAAG-RATLLRELFQGVAYFPAFEITKRALT--PAGGSSNDLDFWRLLIAGGVAGITQWLPPMYCIDVVKSRMEVPPAGSTPGVLGVLRASVAKEGGMVLLRGMGPAMVRAFPMHATILTTNELMTAWLSKLEVVDVAPAAS 347          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6255.16981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLY9_ECTSI1.410e-13492.79Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
D7FM07_ECTSI3.200e-8064.50Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
A0A6H5JUA4_9PHAE3.630e-7964.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8G7_9STRA1.370e-5654.01Carnitine/acylcarnitine carrier protein n=1 Tax=Tr... [more]
W7TE76_9STRA5.580e-5545.66Mitochondrial carrier family n=1 Tax=Nannochlorops... [more]
A0A4D9D591_9STRA2.570e-4545.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6H5K324_9PHAE2.390e-4087.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SEK8_9ARCH1.270e-3742.42MC/SLC25 family protein n=1 Tax=archaeon TaxID=190... [more]
K8Z8A3_NANGC1.510e-3740.30Mitochondrial carrier family n=1 Tax=Nannochlorops... [more]
A0A7S1G657_9STRA1.030e-3237.61Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6255contigEcto-sp13_S_contig6255:566..6292 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score369.8
Seed ortholog evalue7.8e-100
Seed eggNOG ortholog2880.D7FLY9
Model size1558
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0758@1,KOG0758@2759
Ec32 ortholog descriptioncarnitine/acylcarnitine carrier protein
Ec32 orthologEc-22_000230.2
Cds size573
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6255.16981.1prot_Ecto-sp13_S_contig6255.16981.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6255 653..5394 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463869.2870774-UTR-Ecto-sp13_S_contig6255:565..6521681463869.2870774-UTR-Ecto-sp13_S_contig6255:565..652Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6255 566..652 +
1681463869.3618171-UTR-Ecto-sp13_S_contig6255:5394..62921681463869.3618171-UTR-Ecto-sp13_S_contig6255:5394..6292Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6255 5395..6292 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463869.2998505-CDS-Ecto-sp13_S_contig6255:652..7031681463869.2998505-CDS-Ecto-sp13_S_contig6255:652..703Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6255 653..703 +
1681463869.3122149-CDS-Ecto-sp13_S_contig6255:2340..24111681463869.3122149-CDS-Ecto-sp13_S_contig6255:2340..2411Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6255 2341..2411 +
1681463869.3298728-CDS-Ecto-sp13_S_contig6255:4050..41351681463869.3298728-CDS-Ecto-sp13_S_contig6255:4050..4135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6255 4051..4135 +
1681463869.343119-CDS-Ecto-sp13_S_contig6255:4434..46461681463869.343119-CDS-Ecto-sp13_S_contig6255:4434..4646Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6255 4435..4646 +
1681463869.3521454-CDS-Ecto-sp13_S_contig6255:5240..53941681463869.3521454-CDS-Ecto-sp13_S_contig6255:5240..5394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6255 5241..5394 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6255.16981.1

>prot_Ecto-sp13_S_contig6255.16981.1 ID=prot_Ecto-sp13_S_contig6255.16981.1|Name=mRNA_Ecto-sp13_S_contig6255.16981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAVDLARREGIMSGLFR
GIESTMLREMLQCAIYYPSYEVTKDLMVRRSTSGKSSVPEPVLQMLAGGI
AGCATWLPPVYCLDVIKTRIQVAEPGVYRGSWDCLRKTVRSEGTPVLLRG
LGLSMLRAFPMHGLVFVGYEATIGLLTPRENCPAAVLANT*
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mRNA from alignment at Ecto-sp13_S_contig6255:566..6292+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6255.16981.1 ID=mRNA_Ecto-sp13_S_contig6255.16981.1|Name=mRNA_Ecto-sp13_S_contig6255.16981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5727bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6255:566..6292+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGACGAAGGAAGGAGGACGAAGGAGGGGGTGGCAGTGGGGAAGTTTTCCT CTGGGAGAAGAGTGCGGCGGGTTTGTTCGCGGGAGCAATGAACTCCCCCT TCCGAACGGTGTTCGACAGGGTCAAGACTGTCATGCAGGTGATTCAGATC GTGACGCAGGCAGGCAATAAAGATCATCGGCGACAGTCCTCGATATTAGA TCATGGCGTATCGAACGCAATGCTAGCTTGTGGCGTGGACCGAGAGCATG GAAGCAGACGTGCGAATGGGACGCAGGACACGGGTCGCACGTCGAGCTAT GAATGGACCTGAACCAGCTGTAAAAGGACGACGTCGTTTGCTGCACCATG AACCGTTTCTCTCAACACAGTCGTAGTATCGCGTCTGTGTGGTCAAGTCG CATGGGAAGGTCGTCTGCGTTGCGACCGGGCAGACTCCGCCCCAAGAGAG GTGACGATGAAACAAGTAGTGTTCCTTGATTAACGTCGGGCGCGGCCTCG ATAGGACCGCCTTCGCGAGAATGATGGTTTTGAGGAAATAGCGCAGGGAG GGGGTACTATCAAATGAGGACCCGATTCGCAGGTTATCCATCGATTGACT CCTATCAGACTCGGTACACCTTCGCACATGGCGTCAGCTGGATACTGGTT CAAATCTCCTTGGTTGCACATTTTCTCCTGCCTAGGACATTTTCCCCTGG ACACAAATGTGTGCCAGTCCTGAGAGCACCTCTTGGAGTCGATACCATAA AGAAATCTGTGACACATCCATCGAATTACCCGTCCTGGCCACAAGAGTTT CCCAGTTGAGGGAAAATTCTGTGAGTGGAGAGTGTTACGGAGGACCTGAT TCGCAGGGTATCCGTCGATTGACTCTTACCAGTACGCTTACCCCCGAAGC CTTACCCTAGCCCAACTTCCCCTATGGCGTCCTCTGCCCAACATGTTTAC TTCGTAAAAAACCCTGCGGGGGCTACTTCCTGCCTCCATAAGGCCAGTTA CATCTCTTGACACAGATGGAACATTTCACGTTGTCTTATACTCTGAGCCA TGCCGGGTGCCCGGTAGAAGGCCGGCCAAACGCATCCTCGCCTTTTAATC GGCCTTGCATTGGGACCAAAACTGCTGCGCTGTGGTGGATCTCGCGTACG GCAGCGCAGTAGCAGCCAGCACGTTTGATCATGCGCGTAGCGTGTATTTT AGGTCTGCCGAGCGAGGTGTTCGAAAGGGGTTGAGATGATGTGACGTGCT TTTCCCCCATGGGTTGAGCCGAGACTGTGGCTGGACATGACAGCGCCAAC GACGCCAGCGGGTGGGACGAGAGAATCCCTCGCAGGATGTTTGGTGGCAT GAACCCAAAAACCGAGCACATGAAAATCTGTTGAACACGCCACGGTAAAA GGTATACCGCAACTTGGTCGGCGTCGTGCCTCGGCATGAGCACACCATTG TATGACCAACAATTTGTGCCCTCAAAATCGTGCTACCTTATTGTCCGTCT TTCCTAGTCGTTCTGAGCCTCATGGGGTAGAGTTTGTGTTTGTGGTACTT GCAGGGCGGTAGCGCCGGCTCTTGAGAACTTGGCAGTTAAGAAAGTATGA AGTAGGCTCGAAAAAATTAGAATCTTAAGAGCTTGCGAGCACGCTTAAGC ACCCAAACTTCACGGTTATGTGTAACATAACCCTGGGAATTAAGGACCCC CGCCTCGACCGAGACTAGGGGTTCTTGAATGCTGGTGTTGACTGTACTCC GTGTCGTTTGTCACGGCCACTGCAGGTGCGGGTCGGGAATGGGCGAGCAG CACCCTACTCCTGGAGCGGCGCGTGTGCAGTGGACCTAGCGCGAAGGTAT TTGGATCTGTACCTCCGAGGTGTCGCTGACCTTGTTACAGCAGTCTGTGG AGAACAAGGTGGACGACGCTACCGTACGTTGCATGAGAGATCACAACCCT TGGACCGAATATCAGAACTCGATTACTCGGCAGGAAAAGCAGTGACCGTG CCGAAAATAATGCCGTTGGAACAGCCTCGTCGAGATGTTGCCGAAAACGC ATGGTTTGGTCTTGACACCCTCTTCCTCGTGGAGTAATCGTGCGTTGAAG ATCGGTCCAGGGGGAATGTGGTGTCTTCTGCAACCTACGGTATTGGGTTG GGTCAAGTGCTAGTGCAGTAGATACGGCGAGAGCGCGCTTGCCCTTGGTT GTGTACCGCCTGAGCAATCTCCGTGTGTAGAATCATCGCTGGAGAGGGGT TCCTCGGTCTGGGCCAACAGCAGCGCTTGAGTGTCACCGATGCAAGTGGC ATGTGCTCTTGTCGGGTGGGATGCGGGTTCATCGGACGTTGCCCCTTGAC CTCTCGGAGCAGACATGCTCGCTTCTGGTTTATCGCCGTGTCTGGTTTTT GGAGGTGTTTTTGTTTCGTCTTTCGTGGTCTCATCCCCTCCATTCGCAAC AGATTGCGTCGAGGCAGAACAGACCGAGTCCGCTTCCCGCAGCCCTTCTT CGCACGGCGTGCTTGGCCGCTCGCAATCTGTGCCTCTCTCCGCTCTTGAG CCGATACACACCGTCGCCGAGATCGAAGATTGAGGTTCTTCAAGCAGGCC GTGTGTAGAGGAGCGGGAAGGGCTGCGCGGGAACCGGAGTCGTCGGCCTG TTCCGGCTCGACGCAATCTGTTGCGAATATAGGGGACGAGATCACGAAAG ACGATCAAAAGCACCCCTCGTAAAACAGACTCTTGCGTCTCCCCCCGGTC TTGCGGCGGTTTGCCGTCGTCGAGATCGAGCAACGACGGCGTATCGGCGG AGAGAGAGATATGTTGCGAGCGGCAAGGCAGGTCGTGCGACGAGGGACGG CGGGAAGCGGACTCGGTTTGTTCCGCCTCTTTTCCGCTGCTTGTGCGTGG GCCCGAGTATCAGCCGCACGTTAAATTGGGTTCGTGTGCGTACACCATGC GGTCGGTGTTGCGTGGCATGCTGCCTGTTGAGCGCACCACGGCACCTCAT TTTGAGGCATAGTTGGCATGGAGGTTTAGGCAAGTGGATGATGAAGACGA CAAGTTCAAATGTGAATGCGGCGCGGAGTGCGAAGACCGGGTTCATGTGG TTTCGGAATGCCCGGTGTACAAGAAGGAGAGGGAAGTGTTCGTGACTGAG CTTGGAAAAGCAGGAGGAAGGTTCAGACAGATGTTTGAGGCATGGAATAG CCAGCAGAAGACGATAGCTGCACTGGGGCGTAGGACGTGGGTTGAAATGG CGGCAAGTGAAACGATGGGATAGATCGACTAGGGACAACATTTTGGGGCC TTTGGCAGAGGGGGAAGGAACAATTGGCCATCGGTGATCGGTCCTGTGGG ACCAAAAGTCCGTCCTCTCGAGGACGCGTGGTCAACGGTCTATCCGCTAA GGCATGCAAGACATAAGAATACGCCACCCCCGTCCCTCCGCCGTCCCCGC TTCCGCGAACGGAATGGTCGCGTGTTTATCCCCAGGGAGGGCATAATGTC GGGCCTTTTTCGTGGGATCGAATCGACAATGCTCAGGGAAATGTTGCAGT GTGCGATATACTACCCATCGGTGAGTGCTGTGAGGAGTTGGTGGCCCAGA AGGGCTTTTTTATGTTGGTGCGCGAAGCAACCCGCCCTGGGGGTGAGTAC TTTCCCTCGAGAGAGAATTGCGATCCTAGCGGGTAGATGCTTGTTTTCGT ACCCGCTGAAGCCAACCCCCCAGTGGAACGTAGTATAATAGCGCCATCAC AGTGACTCTGTCCAGTCCACTACAGGCCAATCAACTCTCCTTCAGGCGAA AAGCGAACCGGACAGTTAAACCCGTTTTGACACACCACCACACCCCCGCC CCGCTTTACGTTCTCCTAGTATGAGGTTACCAAAGACTTGATGGTACGCC GAAGTACATCGGGCAAGAGCAGCGTTCCTGAGCCGGTGCTGCAGATGCTG GCGGGAGGGATAGCCGGGTGCGCGACGTGGCTGCCGCCCGTTTACTGCCT GGACGTGATCAAGACGAGGATTCAGGTCGCGGAGCCCGGCGTGTACCGCG GGTCGTGGGACTGCCTGAGGAAGACAGTGAGGTGCGTCGGAGAGAGTCAG AAGACGTGCGAAGTGTTTGCGTGCGTTGCCGACGAGGTCTCTGCCAAACT CGAATGCTGCCTTGCAACGTCATGACGTCATGTTGTAGATGCGACGTCAT GTATACCCCCCACGGCGCACTCGTGTGGAAGCCTATGCATACAATTGTAG ACCACCAGGTGCTGCACAGACTTCGTGCGATTACGTTGCCCTTGTGCTGG CTAACGTAAATGGCATGAAGCGGTCGGTACTGCAGCACGTACGTGGGGAT GAAGGTAGTGCGTGTCAGAGAGGTTGCTTGCCTTGTCGCTCCTCCCGCTA GGTTGAAGAGGCAAGGACCGAACATCTTGAAAACTGTTGAGCTTGGCTCG CCAATAGCATATGGCATTGAGTTGCTAGCGATACAGAGACGAAATTGTGT AGAATTCCCCCAACCCTTCCCTGGGGAGAGCTCAAGCGCGGGGGCTTTTG CACCCCTCGAAACATGCGAAAATTGGTTCGGAAAAAGAGAGAGAAAACGG CATTGTACACGGGCGTTGTGAAGTGTGTTTCGCGTGACTCTTATCCTTCC CCGCTGCACCCCTCAAAATCTGCAGGTCGGAAGGAACACCGGTATTGCTT CGGGGTTTGGGGCTGTCCATGCTCCGTGCCTTTCCGATGCACGGGCTTGT GTTCGTCGGGTACGAGGCCACCATTGGCCTCTTGACCCCCCGTGAAAATT GTCCCGCTGCTGTCCTCGCCAACACGTAGTTCTCCTCGGTACAGCATCGA GTGTTTTATCCTGTTGACGACAAGGTTCGTCGGCTGTAGGCTGGGGAAAG TGTGGGAGACGCCGGTATAGGAGATGATACCGGTGGGGCTCAACAATCAC AGCACGAACACGGAAGCGTGTACGGCCAGATGCGCTGGTCGAGTCCTCGC CTGAGCCAACGTTACAAGGCAACTCCACGTTGAATGCTTTGCTTGTTGTC GGAAGGTCGGGCCGGAAAATACCGACGGACACGATCTTCCTTGTCGCGGA ACCAACCTTGACGACGTTAGCAGATGCTTTAAGGTTAGGGCTGTGTACTT CTGCGCTGTATACTCGGAGTACTTCTATATAGTGTAAAGGACAGGACTGG ATGATTTAGGCTACCGTGAGTGGGTGTCGTTAACACCTTGCGAAGTGCCT TGTGTCGTGACAAGGTAGAATATACCTATGCCTTGCTCATTATAGTATCG TACATGTCTGCAGTGGTATAGTGGCGTCTCTGCAGTAGGGTAGTTTTCCT TTTCGGTGGGTGATGCTGACATTGTCCCCTGGAACGTGTCATTCTTCATA TGTCGAATCCCGTTTGATGCTTCAACTTCTCATGAGTTCGAGCACTGTAT GTAACAAATTCAACATTGAGTAACAATTGTGTAACTTTTTCAACACCGCG GAGTCTGCTGCCCGTTTTGTTGAGCACAACGCCGTACGTGCAAGCTTTTT GTGTTTCCCTCCGACGTTGTGGTTAGGAAGTGGTCGATTTCCGTCCATGT TGTTTAAGGGTCAGGGTTTTAGGTTTTCCGTGCAAATTTTTGTTTGCATA TGTCGGTGAGATTTTTCGTACAGGGTTTTTAGTGAAGGTGTGCATGGTAT TTGTTACTCTCTGAAGTTTTTCCACGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6255:566..6292+

>mRNA_Ecto-sp13_S_contig6255.16981.1 ID=mRNA_Ecto-sp13_S_contig6255.16981.1|Name=mRNA_Ecto-sp13_S_contig6255.16981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6255:566..6292+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACTCCCCCTTCCGAACGGTGTTCGACAGGGTCAAGACTGTCATGCA
GGTGCGGGTCGGGAATGGGCGAGCAGCACCCTACTCCTGGAGCGGCGCGT
GTGCAGTGGACCTAGCGCGAAGGGAGGGCATAATGTCGGGCCTTTTTCGT
GGGATCGAATCGACAATGCTCAGGGAAATGTTGCAGTGTGCGATATACTA
CCCATCGTATGAGGTTACCAAAGACTTGATGGTACGCCGAAGTACATCGG
GCAAGAGCAGCGTTCCTGAGCCGGTGCTGCAGATGCTGGCGGGAGGGATA
GCCGGGTGCGCGACGTGGCTGCCGCCCGTTTACTGCCTGGACGTGATCAA
GACGAGGATTCAGGTCGCGGAGCCCGGCGTGTACCGCGGGTCGTGGGACT
GCCTGAGGAAGACAGTGAGGTCGGAAGGAACACCGGTATTGCTTCGGGGT
TTGGGGCTGTCCATGCTCCGTGCCTTTCCGATGCACGGGCTTGTGTTCGT
CGGGTACGAGGCCACCATTGGCCTCTTGACCCCCCGTGAAAATTGTCCCG
CTGCTGTCCTCGCCAACACGTAG
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