mRNA_Ecto-sp13_S_contig6227.16953.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A6H5JRG7_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG7_9PHAE) HSP 1 Score: 1156 bits (2991), Expect = 0.000e+0 Identity = 882/1103 (79.96%), Postives = 898/1103 (81.41%), Query Frame = 1
Query: 1 DDDALRNGGPTAPRPHEAAAGTAGAXXXXXXXXXGAFDPLAEAEASPGLDAXXXXXXXXXXXXXXXXXXXXAAVGPAAAPGDGDAXXXXXXXXXXXXXXXXXXXXTARAMVPDMEDDGAQQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVKDFMMKKDPKPSAVATVGAGAGVGGGAADTTVEALASEGGGGVHGPTGASNVEPATPGSAPKSQGAQTAPSGDRAVEHRPHAASAATVTXXXXXXXXXXXXXXXXXGPGTVTVEDIVRGVPAEMVVPAPTATCVGPTGADGTCRGEVLTQKTAMGAGTAASLGAKVPTMGGAGVPAEGSPPQDGGRSGEGLRAAAADGGAHRGGVTTAGADQLDRPIGAGEGGAGGAGTEAAVQPANEEAASAAAAGHGGANDGAENAHILPKDGAGDGSLAEGRVKASVSDGAVGEGEGVAAAVEGQEAGAGAXXXXXXXXXXRKGIIHSTMEAISKVVNRGEGVKPKEEDSTAGPAVVGGPVDASGXXXXXXXVSLSSSDPVEGEAQVASSEPPGSASVLGGATTNSGSAQGDVDTAPKSDAGLSGAGGSEHFPATGKPPSSYGGGVDGVNTASGXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHAHAGGTVPRPPAELVKR-ATVAPADPASPVDDNPGGSRDGGQQAGPAGAAAAVEPANGEPPGTSNGSQEQREGSTTTVPAVGVGPAAAADADHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------EETNVAVLSAAACLDTLSFSEFREEVLARTQQAQQSAGGGVAIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQNVIAQMLQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVVEVENRMLLSSLAWFTSLFCLVLIVCSCCLKACR 3252
DDDALRNGGPTA RPHEAA XXXXXXXXX A +P AEAEA PGLD XXXXXXXXXXXXXXXXXX AAVGPAAAPGD XXXXXXXXXXXXXXXXXXXX DM+DDGAQ PKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVR+LVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREV+DFMMKKDPKPSAVATVGAGAG AADTTVEALASEGGGG HGPTGASNVEPATPGSAPKS GAQTAPSGD AVEHRPHAASAATVTXXXXXXXXXXXXXXXXXGPGTVTVEDIVRGVPAEMVVPAP ATCVGPTGADGTCRGEVL QKTA+GAGTAASL AKVPTMGGAGVPAEGSPPQDGGRSGEGLRAAA GAD LDRPIGAGEGG GGAGTEAAVQPANEEA SAAAAGHGGANDGA+N H+LPKDGA DGSLAEGR+KASV V+RGEGVKPKEED TAGPA VG PVDASGXXXXXXX LSSSDPVEGEAQVASSEPPGSASV+ GA NSGSAQGDVDT PKSDAGL+GAGGSEH PATGKP SS GGGV+GV+ S XXXXXXXXXXXXXXXXXXXXXXXXXX SDHAHAGGTVPRPPA+ V AT A ADPASP DD PGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EET+VAVLS AACLDTLSFSEFREEVLARTQQAQQSAGGGVAIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQNVIAQM+QEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKV EVENRMLLSSLAWFTSLFCLVLIVCSCCLKACR
Sbjct: 85 DDDALRNGGPTATRPHEAAEAX---XXXXXXXXXXALEPPAEAEAPPGLDXXXXXXXXXXXXXXXXXXXDPAAVGPAAAPGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDMDDDGAQ-PKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAVATVGAGAGGEESAADTTVEALASEGGGGAHGPTGASNVEPATPGSAPKSAGAQTAPSGDGAVEHRPHAASAATVTXXXXXXXXXXXXXXXXXGPGTVTVEDIVRGVPAEMVVPAPMATCVGPTGADGTCRGEVLAQKTAVGAGTAASLDAKVPTMGGAGVPAEGSPPQDGGRSGEGLRAAAXXXXXXXXXXXXXGADHLDRPIGAGEGGPGGAGTEAAVQPANEEATSAAAAGHGGANDGADNEHLLPKDGASDGSLAEGRLKASV-------------------------------------------------VSRGEGVKPKEEDGTAGPAAVGEPVDASGXXXXXXXXXLSSSDPVEGEAQVASSEPPGSASVVEGAIANSGSAQGDVDTVPKSDAGLAGAGGSEHLPATGKPLSSNGGGVNGVHAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDHAHAGGTVPRPPADQVNSGATAARADPASPADDYPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVEETDVAVLSTAACLDTLSFSEFREEVLARTQQAQQSAGGGVAIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQNVIAQMIQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVAEVENRMLLSSLAWFTSLFCLVLIVCSCCLKACR 1134
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: D8LTA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA7_ECTSI) HSP 1 Score: 818 bits (2114), Expect = 5.740e-283 Identity = 602/683 (88.14%), Postives = 613/683 (89.75%), Query Frame = 1
Query: 1222 MVVPAPTATCVGPTGADGTCRGEVLTQKTAMGAGTAASLGAKVPTMGGAGVPAEGSPPQDGGRSGEGLRAAAADGGAHRGGVTTAGADQLDRPIGAGEGGAGGAGTEAAVQPANEEAASAAAAGHGGANDGAENAHILPKDGAGDGSLAEGRVKASVSDGAVGEGEGVAAAVEGQEAGAGAXXXXXXXXXXRKGIIHSTMEAISKVVNRGEGVKPKEEDSTAGPAVVGGPVDASGXXXXXXXVSLSSSDPVEGEAQVASSEPPGSASVLGGATTNSGSAQGDVDTAPKSDAGLSGAGGSEHFPATGKPPSSYGGGVDGVNTASGXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHAHAGGTVPRPPAELVKR-ATVAPADPASPVDDNPGGSRDGGQQAGPAGAA----AAVEPANGEPPGTSNGSQEQREGSTTTVPAVGVGPAAAADADHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EETNVAVLSAAACLDTLSFSEFREEVLARTQQAQQSAGGGVAIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQNVIAQMLQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVVEVENRMLLSSLAWFTSLFCLVLIVCSCCLKACR 3252
MVVPAPTATCVGPTGADGTCRGEVL QKTA GAG AASLGAKVPTMGGAGVPAEGSPPQDGGRSGE LRAAAAD GAH GGVTTAGADQLD PIGAGEGGAGG GTEAAVQPANEEAASAAAAGHGGANDGAEN H+LPKDGAGDGSLAEGRVKAS+S GAVGEGEGVAAAVEGQEAGAGAXXXXXXXXXXRKGIIHSTMEAISKVVNRGEGVKPKEED AG A VG P D SG SL S+DPVEGEAQVASSEPPGSA+VL GA TNSGSAQGDVDTAPKSDAGL+GAGGSE PA GKPPSS GGGVDGV+ A XXXXXXXXXXXXXXXXXXXXXXXXX SDHAHAGGTVPRPPAE V AT APADPASP DD PGGS GGQQ GPAGA AA+EPANGEPPGTSNGS QREGS TT+PA GVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EET+VAVLSAAACLDTLSFSEFREEVLARTQQAQQSAGGGVAIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQ+VIAQMLQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVVEVENRMLLSSLAWFTSLFCLVL+VCSCC K CR
Sbjct: 1 MVVPAPTATCVGPTGADGTCRGEVLAQKTAAGAGAAASLGAKVPTMGGAGVPAEGSPPQDGGRSGEVLRAAAADEGAHGGGVTTAGADQLDHPIGAGEGGAGGTGTEAAVQPANEEAASAAAAGHGGANDGAENEHLLPKDGAGDGSLAEGRVKASLSVGAVGEGEGVAAAVEGQEAGAGAXXXXXXXXXXRKGIIHSTMEAISKVVNRGEGVKPKEEDGAAGAAAVGDPDDGSGGCGGSS-ASLWSNDPVEGEAQVASSEPPGSATVLAGAATNSGSAQGDVDTAPKSDAGLAGAGGSEQLPAMGKPPSSNGGGVDGVHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDHAHAGGTVPRPPAEHVNSGATAAPADPASPADDYPGGSSGGGQQEGPAGAXXXXXAALEPANGEPPGTSNGSXXQREGSKTTIPAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEETDVAVLSAAACLDTLSFSEFREEVLARTQQAQQSAGGGVAIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQDVIAQMLQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVVEVENRMLLSSLAWFTSLFCLVLMVCSCCFKTCR 682
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: D8LTA6_ECTSI (SUN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA6_ECTSI) HSP 1 Score: 464 bits (1195), Expect = 5.090e-153 Identity = 240/249 (96.39%), Postives = 244/249 (97.99%), Query Frame = 1
Query: 316 TARAMVPDMEDDGAQQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVKDFMMKKDPKPSAVATVGAGAGVGGGAADTTVEALASEGGGGVHGPTGASNVEPATPGSAPKSQGAQTAP 1062
TARAMVPD+EDDGA+QPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVR+LVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREV+DFMMKKDPKPSAV TVGAGAGVGGGAADTTVEALASEGGGG HGPTG SNVEPATPGSAPKS G QTAP
Sbjct: 11 TARAMVPDVEDDGAKQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAVGTVGAGAGVGGGAADTTVEALASEGGGGAHGPTGVSNVEPATPGSAPKSPGVQTAP 259
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A835YLS6_9STRA (UNC-like C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS6_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.590e-71 Identity = 114/168 (67.86%), Postives = 140/168 (83.33%), Query Frame = 1
Query: 328 MVPDMEDDGAQQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQS 831
MVPD E+ + + K L+NYAS+DSGAV++E SP +KG NLL+DSKDKY ISPCE+KQW V+GLSEDILVRT+ +GS+EKYS ++KEFQVLASQ++PV+ W+DLG FTA GEQTFE+P PAFARYLKFK LSHYGD++YCT+S V+VHGSTMLESF +WQ S
Sbjct: 1 MVPDKEEGDSAKLKPTKLKNYASKDSGAVMMEHSPGTKGADNLLVDSKDKYTISPCEEKQWVVIGLSEDILVRTIKLGSYEKYSRIVKEFQVLASQSFPVDNWMDLGVFTAADAHGEQTFELPSPAFARYLKFKLLSHYGDDYYCTLSHVRVHGSTMLESFHEDWQAS 168
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: B8CB42_THAPS (SUN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB42_THAPS) HSP 1 Score: 196 bits (497), Expect = 2.790e-47 Identity = 97/176 (55.11%), Postives = 131/176 (74.43%), Query Frame = 1
Query: 337 DMEDDGAQQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNE--WLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVKD 858
D+ D+G PK L +YAS+ +GA +LE SP+ KG NLL DKYAI+PCE+K++ V+GLSEDILV+ + + ++E+YSS ++EFQVLASQ YP W DLGT+TA GEQTFE+ +PA+ARYLKF+F+SHYG E YCT+SQ+KVHGSTML+ F +W +S + RE+ +
Sbjct: 292 DIPDEGEDGPKEHVLVDYASKLAGAQILEKSPSLKGTSNLLTGDIDKYAIAPCEEKKYVVIGLSEDILVKRIKLSNYERYSSHVREFQVLASQEYPAPSEYWNDLGTYTALSKSGEQTFELNEPAWARYLKFRFMSHYGKEHYCTLSQIKVHGSTMLQGFHEQWIESEKKDRELAE 467
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A7S2UMH9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMH9_9STRA) HSP 1 Score: 185 bits (470), Expect = 5.500e-46 Identity = 87/169 (51.48%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 343 EDDGAQQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVRE 849
+D+ + RV L +YA++ SGA++LE SP KG NLL D D+YAI+PCEDK++ V+GLSEDILV+ + + ++E+YSS +KEF + S T + +W ++GTFTAK GEQ+F++ +P +ARYLKF+F +HYG E YCT+SQ+KVHGSTML+ F +WQ S E +
Sbjct: 162 DDEEGGKMSRVTL-DYANKSSGALILEKSPTMKGSSNLLNDDMDRYAIAPCEDKKYVVVGLSEDILVKQVFLANYERYSSHVKEFTIFGSTTMLMGDWAEVGTFTAKPRNGEQSFDLTEPVWARYLKFRFTTHYGSEHYCTLSQIKVHGSTMLQGFHEQWQASEEETED 329
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A7S3GXC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXC2_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.240e-45 Identity = 93/188 (49.47%), Postives = 130/188 (69.15%), Query Frame = 1
Query: 328 MVPDMEDDGAQQPKR---VNLQNYASRDSGAVLLEASPAS-KGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQ-PAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVKDFMMKKD 876
+V D +DD K V + N+AS+ +GAV+L+ SPAS KG LL D KDKY ISPCE+K+W V+GLSEDIL+ ++ + ++EKYSS LK+FQ+LAS +YP +EW++LG +TAK G Q F + A RYLK KFL+HY DE CT+SQ+KV G T++ SFQ E Q+S +R++ + + +D
Sbjct: 27 IVKDKDDDDEANTKAKRAVKMFNFASQSAGAVILDKSPASAKGFHYLLNDDKDKYGISPCEEKKWVVIGLSEDILITSIEVSNYEKYSSTLKDFQLLASYSYPTDEWINLGQYTAKPQLGAQLFNVTDNEAHTRYLKVKFLTHYSDEALCTLSQIKVFGVTVIASFQQEVQRSDTNMRDMLNQISSED 214
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A7S1D9Q2_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q2_CYCTE) HSP 1 Score: 187 bits (476), Expect = 4.470e-45 Identity = 92/169 (54.44%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 334 PDMEDDGAQQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAE 840
P+ EDDG P + +YAS +GA++LE SP KG NLL +KDKYAISPCE+K++ V+GLSEDILV+ + + ++E+YSS +K+FQ+L SQT + +W++LGT+TA G+Q F++ QP++ARYLKF+FLSHYG E YCT+SQ+ VHGST L+ F EWQ S E
Sbjct: 205 PEDEDDG---PSEIVTVDYASTTAGALILEKSPHMKGTSNLLNGNKDKYAISPCEEKKFVVIGLSEDILVKQVCLANYERYSSRVKDFQILGSQT--MGKWVNLGTYTADPNNGQQKFDLGQPSWARYLKFRFLSHYGSEHYCTISQIMVHGSTQLQGFHEEWQDSKDE 368
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A482SF98_9ARCH (SUN domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF98_9ARCH) HSP 1 Score: 166 bits (421), Expect = 4.500e-43 Identity = 86/164 (52.44%), Postives = 119/164 (72.56%), Query Frame = 1
Query: 331 VPDMEDDGAQQPKRV--NLQNYASRDSGAVLLEASPAS-KGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQ--PAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLES 807
V D E D R NL N+AS +GAV+L++SP+S KG NLL KDKY+ISPC +K+W V+GLSEDI + ++V+ ++E+YSSL+K+FQ+LAS +YP +EW+DLGT+TA+ GEQTF I Q + RYL+ +F +HY DE CT+SQ+KVHG T++ S
Sbjct: 31 VDDEEVDATNSNSRSSGNLFNFASATAGAVVLDSSPSSAKGYYNLLNSDKDKYSISPCSEKRWVVIGLSEDIQITSVVLANYERYSSLVKDFQLLASGSYPTSEWIDLGTYTAEPKLGEQTFNITQLSTGYTRYLRVRFQTHYLDEALCTLSQIKVHGLTIIAS 194
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Match: A0A7S1TP62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP62_9STRA) HSP 1 Score: 167 bits (424), Expect = 7.450e-43 Identity = 80/149 (53.69%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 364 PKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCE-DKQWAVLGLSEDILVRTLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLES 807
P+RVN YAS+++GA+ L +SPA KG LL ++DKYAI PC +++W V+GLSEDI+V++ + + E+YSS+ E ++LA+ TYP +W DLG + A+FV+GEQTFE+P A+ARYLK +FLSH+G E+YCT+S+VKVHG T++E+
Sbjct: 40 PRRVN---YASKEAGALSLGSSPALKGASALLEKNQDKYAIVPCTAEERWVVIGLSEDIMVKSFSMANFEQYSSMFHEVRLLAATTYPTEKWADLGVYAAEFVRGEQTFEVPGGAWARYLKLEFLSHHGVEYYCTLSEVKVHGETLVEN 185 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6227.16953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6227.16953.1 >prot_Ecto-sp13_S_contig6227.16953.1 ID=prot_Ecto-sp13_S_contig6227.16953.1|Name=mRNA_Ecto-sp13_S_contig6227.16953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1084bp DDDALRNGGPTAPRPHEAAAGTAGAAAGTAGAAGGAFDPLAEAEASPGLDback to top mRNA from alignment at Ecto-sp13_S_contig6227:3299..8436+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6227.16953.1 ID=mRNA_Ecto-sp13_S_contig6227.16953.1|Name=mRNA_Ecto-sp13_S_contig6227.16953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5138bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6227:3299..8436+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6227:3299..8436+ >mRNA_Ecto-sp13_S_contig6227.16953.1 ID=mRNA_Ecto-sp13_S_contig6227.16953.1|Name=mRNA_Ecto-sp13_S_contig6227.16953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3252bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6227:3299..8436+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |