mRNA_Ecto-sp13_S_contig61885.16893.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A6H5K8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P7_9PHAE) HSP 1 Score: 117 bits (293), Expect = 2.020e-29 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1
Query: 1 YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR
Sbjct: 447 YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 495
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: D7FKT5_ECTSI (Alpha-L-fucosidase, family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT5_ECTSI) HSP 1 Score: 117 bits (293), Expect = 2.020e-29 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1
Query: 1 YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR
Sbjct: 868 YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 916
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A7S1H9J3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9J3_HEMAN) HSP 1 Score: 72.4 bits (176), Expect = 1.310e-13 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 4 YRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
Y A GWV+H TD W G + GD W+LC TCGAWMALHLWE + +TR
Sbjct: 100 YGAKGWVAHGFTDIWMGASPLGDTAWSLCVTCGAWMALHLWERFRFTR 147
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A7S0QTJ0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTJ0_9CRYP) HSP 1 Score: 69.7 bits (169), Expect = 1.180e-12 Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 1
Query: 16 GWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
GWV+H TD W GDA+WALCPTCGAW+ALHLWE + + R
Sbjct: 119 GWVAHGFTDIWMNARPLGDAMWALCPTCGAWLALHLWERFAFRR 162
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A7S3YGH4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGH4_HETAK) HSP 1 Score: 68.2 bits (165), Expect = 1.570e-12 Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 1 YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEY 141
YYR GWV+H TD W H + W+LCPTCGAW AL LWEAY +
Sbjct: 86 YYRCPGWVAHGFTDLWAEGGLHSNIEWSLCPTCGAWAALALWEAYTH 132
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A7S1MX31_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MX31_HEMAN) HSP 1 Score: 66.2 bits (160), Expect = 5.960e-12 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 4 YRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
Y A GWV+H TD W T G + WALCPTCGAWMAL WE + +TR
Sbjct: 81 YGAKGWVAHGFTDIWMDTKPVGGSRWALCPTCGAWMALQQWENFRFTR 128
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A494Y0I6_9BACL (Glycoside hydrolase family 95 protein n=1 Tax=Cohnella endophytica TaxID=2419778 RepID=A0A494Y0I6_9BACL) HSP 1 Score: 65.1 bits (157), Expect = 5.120e-11 Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 1 YYRAGGWVSHANTDRWGGTA-----AHGDAVWALCPTCGAWMALHLWEAYEYTR 147
+Y A GW +H NTD WG TA HGDAVWAL P G W+A HLWE Y + R
Sbjct: 404 HYGAQGWTAHHNTDIWGHTAPVGDYGHGDAVWALWPMGGPWVAQHLWEHYAFGR 457
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A7X7T8L0_9BACT (Glycoside hydrolase family 95 protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7X7T8L0_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.790e-10 Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 4 YRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
Y AGGWV+H NTD W TA W + P GAW+ LHLW+ Y+Y+R
Sbjct: 424 YNAGGWVTHHNTDLWRATAPIDGPQWGMWPMGGAWLCLHLWDRYDYSR 471
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: A0A328TSL9_9BACL (Glycoside hydrolase family 95 protein n=1 Tax=Paenibacillus montanisoli TaxID=2081970 RepID=A0A328TSL9_9BACL) HSP 1 Score: 62.4 bits (150), Expect = 4.570e-10 Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 1 YYRAGGWVSHANTDRWGGTA-----AHGDAVWALCPTCGAWMALHLWEAYEYTR 147
+Y A GW +H NTD WG TA GDAVWAL P G W+A HLWE Y + R
Sbjct: 405 HYGARGWTAHHNTDIWGHTAPVGDFGQGDAVWALWPMGGPWLAQHLWEHYAFGR 458
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Match: UPI0019349962 (glycoside hydrolase N-terminal domain-containing protein n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI0019349962) HSP 1 Score: 62.4 bits (150), Expect = 4.570e-10 Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 4 YRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 147
Y A GWV+H NTD W TA W + PT GAW+ LHLW+ Y+Y+R
Sbjct: 462 YDARGWVTHHNTDLWRATAPIDGTKWGMWPTGGAWLCLHLWDRYDYSR 509 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61885.16893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig61885.16893.1 >prot_Ecto-sp13_S_contig61885.16893.1 ID=prot_Ecto-sp13_S_contig61885.16893.1|Name=mRNA_Ecto-sp13_S_contig61885.16893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp YYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR*back to top mRNA from alignment at Ecto-sp13_S_contig61885:369..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig61885.16893.1 ID=mRNA_Ecto-sp13_S_contig61885.16893.1|Name=mRNA_Ecto-sp13_S_contig61885.16893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61885:369..518+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig61885:369..518+ >mRNA_Ecto-sp13_S_contig61885.16893.1 ID=mRNA_Ecto-sp13_S_contig61885.16893.1|Name=mRNA_Ecto-sp13_S_contig61885.16893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61885:369..518+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |