mRNA_Ecto-sp13_S_contig618.16881.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: D7G2E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E3_ECTSI) HSP 1 Score: 388 bits (997), Expect = 3.520e-131 Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 1
Query: 1 MKASNVWLGLLGAAVTTFPTGADTTGYLTTCYDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFMLWETED 534
MKASN+WLGLLGAAVTT PTGADTTGYLTTCYDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDPLAPCVDEDDD+TADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFMLWETED
Sbjct: 1 MKASNIWLGLLGAAVTTLPTGADTTGYLTTCYDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDPLAPCVDEDDDVTADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFMLWETED 178
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 139 bits (351), Expect = 6.650e-33 Identity = 85/166 (51.20%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 64 ADTTGYLTTCYDYG-IGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDL---CKSDSF--YACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCETDN---EHLCQ--FFVCLDPEAECAEDDDTNTDDAMSYEFMLWET 528
A T + CYD IGNG CD N E+C YDGGDCCECTCDPS D C++ + +ACIDP APCVD DD +TA+M + Q G+G CD NN PE YD GDCCECTCE+ + E+ C+ F C+DPEAEC +DDD NT A YE W T
Sbjct: 151 AVTVDMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVD-DDIVTAEMM-DLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVDDDD-NT--AEQYEHCGWVT 311
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 133 bits (335), Expect = 6.560e-30 Identity = 72/146 (49.32%), Postives = 88/146 (60.27%), Query Frame = 1
Query: 70 TTGYLTTC-YDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDD--LCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCET--DNEHLCQFFVCLDPEAECAEDDDTNTD 492
T + C Y GIG+G CD NN E C YDGGDCCECTC+ G+ DD C++ +AC+DP APCVD DD +T DM GDG C + N PE YD GDCC CTCE+ D++ C +F C+DPEA C +DDD D
Sbjct: 50 TVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCE---GSEDDDWHCRN---FACVDPNAPCVD-DDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVD 188
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 131 bits (330), Expect = 2.230e-29 Identity = 73/158 (46.20%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 88 TCYDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCET--DNEHLCQF----FVCLDPEAECAEDDDTNTDD------AMSYEFMLWE 525
+C G+G+G CD NN C YDGGDCCECTC+P+ + C S +ACIDP APCVD DD +T DM G+G CD+ENN YD GDCCECTCE+ ++++ C F C DP A C ++ T +DD MSYEF+ WE
Sbjct: 177 SCDAVGMGDGYCDMDNNNAACAYDGGDCCECTCEPN-----NKCGGRSGFACIDPGAPCVD-DDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTGSDDFSTDDQPMSYEFVPWE 328
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: A0A6H5JMX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX4_9PHAE) HSP 1 Score: 119 bits (297), Expect = 5.630e-29 Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 1
Query: 373 YDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFMLWETED 534
YDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFM WETED
Sbjct: 11 YDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFMPWETED 64
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 132 bits (331), Expect = 8.440e-29 Identity = 72/151 (47.68%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 70 TTGYLTTC-YDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCETD--NEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEF 513
T + C Y GIGNG CD NN E C YDGGDCCECTC+ SL D C+++ +AC+DP APCVD DD +T DM GDG C ++ N PE YD GDCC CTC+ D ++ F C+DPEA C DDD D ++ E+
Sbjct: 275 TVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCE-SLEDDDWACRNN--FACVDPNAPCVD-DDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEY 421
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.790e-28 Identity = 72/146 (49.32%), Postives = 84/146 (57.53%), Query Frame = 1
Query: 70 TTGYLTTCYDYGIGNGECDPRNNKEECDYDGGDCCECTC---DPSLGTSDDLCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWH-QFGDGLCDQENNVPEYDYDDGDCCECTCETDNEHLCQF--FVCLDPEAECAEDDDTNT 489
T + C IG+G+CD NN+EEC YDGGDCC CTC D G LC + +ACIDP APCV+ DDDIT DM FGDG CD +NN E YD GDCC CTC D + C F C+DP AEC +DD +T
Sbjct: 238 TVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVN-DDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTC-VDGTYECGIVGFDCVDPSAECVDDDYPST 381
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.970e-28 Identity = 77/172 (44.77%), Postives = 96/172 (55.81%), Query Frame = 1
Query: 4 KASNVWLGLLGAAVTTFPTGADTTGYLTTCYDYGIGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDD-LCKSDSF-YACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCET---DNEHLCQF----FVCLDPEAECAEDDDTNTD 492
K S+ LG+LGAA GA C++ G G+G C +NN EC YDGGDCCECTC G D+ C D + +ACIDP APCVD DDDIT ++ G+G CD++NN YD GDCCECTC + D++ C F C+DP A C +DDD D
Sbjct: 3 KHSSRLLGVLGAAAILSSVGA--------CWEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVD-DDDITIEIAQNCVT-SDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFACIDPAAPCVDDDDVTID 164
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 126 bits (316), Expect = 3.130e-27 Identity = 72/158 (45.57%), Postives = 88/158 (55.70%), Query Frame = 1
Query: 94 YDYGIGNGECDPRNNKEECDYDGGDCCECTCD--PSLGTSDDLCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCET--DNEHLCQF----FVCLDPEAECAEDDDTNTDD------AMSYEFMLWE 525
Y +G+G CD NN E C YDGGDCCECTC+ DD ++CIDP A CV DDDIT DMF G+G CD+ NN E YD GDCC CTC++ D+++LC F C DP A C ++ T +DD MSYEF+ WE
Sbjct: 95 YALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACV-SDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDEPMSYEFVPWE 251
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 127 bits (318), Expect = 4.630e-27 Identity = 74/167 (44.31%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 70 TTGYLTTC-YDYGIGNGECDPRNNKEECDYDGGDCCECTCD--PSLGTSDDLCKSDSFYACIDPLAPCVDEDDDITADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCET--DNEHLCQF----FVCLDPEAECAEDDDTNTDD------AMSYEFMLWE 525
T + C Y +G+G CD NN E C YDGGDCCECTC+ DD ++CIDP A CV DDDIT DMF G+G CD+ NN E YD GDCC CTC++ D+++LC F C DP A C ++ T +DD MSYEF+ WE
Sbjct: 448 TVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACV-SDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDEPMSYEFVPWE 613 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig618.16881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig618.16881.1 >prot_Ecto-sp13_S_contig618.16881.1 ID=prot_Ecto-sp13_S_contig618.16881.1|Name=mRNA_Ecto-sp13_S_contig618.16881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp MKASNVWLGLLGAAVTTFPTGADTTGYLTTCYDYGIGNGECDPRNNKEECback to top mRNA from alignment at Ecto-sp13_S_contig618:17035..19531- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig618.16881.1 ID=mRNA_Ecto-sp13_S_contig618.16881.1|Name=mRNA_Ecto-sp13_S_contig618.16881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2497bp|location=Sequence derived from alignment at Ecto-sp13_S_contig618:17035..19531- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig618:17035..19531- >mRNA_Ecto-sp13_S_contig618.16881.1 ID=mRNA_Ecto-sp13_S_contig618.16881.1|Name=mRNA_Ecto-sp13_S_contig618.16881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig618:17035..19531- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |