mRNA_Ecto-sp13_S_contig618.16879.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig618.16879.1
Unique NamemRNA_Ecto-sp13_S_contig618.16879.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A6H5JI62_9PHAE (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI62_9PHAE)

HSP 1 Score: 598 bits (1542), Expect = 1.150e-214
Identity = 304/334 (91.02%), Postives = 309/334 (92.51%), Query Frame = 1
Query:    1 QEEEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSS-----TCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMNSMAAPV 987
            QE+EALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLG VFPELTETGADLEL+Q LEKSEVYRNGDGGE + ENG RRK RRLGRRTLLELGCGVGNAVFPLLEENRGL+VIAADLSPRGI VLKQHP YSCGRCEALVLDATADDLPP VLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDN YVRQDGTTSYFFSLEDLRQLFCG SP GSGLRD S           TCS QSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPM+SMAAPV
Sbjct:   24 QEKEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGTVFPELTETGADLELSQRLEKSEVYRNGDGGETVTENGTRRKARRLGRRTLLELGCGVGNAVFPLLEENRGLFVIAADLSPRGIGVLKQHPKYSCGRCEALVLDATADDLPPGVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNFYVRQDGTTSYFFSLEDLRQLFCGSSPGGSGLRDSSXXXXXXXXXXXTCSGQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMHSMAAPV 357          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A7S2MQY1_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQY1_9STRA)

HSP 1 Score: 247 bits (631), Expect = 9.190e-77
Identity = 145/326 (44.48%), Postives = 183/326 (56.13%), Query Frame = 1
Query:    7 EEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSC----GRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMNS 972
            EEA+  V+ +GPPL +     YER+A+K+WD+FY RN  NFFKDRHYL +V+PEL     D E AQ                        ++RR      LE+GCGVGNA+FPLLE    L  IA D S   IQVLK H  Y      GRC A V D T D+LPP     GG+D+V+L F LSA++P++M      +  ALKPGG LL RDYGR DEAQLRF KGR+LGDN YV+QDGT  ++F+ +++  L                                     L   E+ F+RRQYANRAQ+VAR+RVW+HG+F+K M S
Sbjct:   69 EEAIACVEKQGPPLREAMVRFYERDAKKNWDMFYKRNGTNFFKDRHYLARVYPELR----DHEPAQNP----------------------RIRRF-----LEVGCGVGNALFPLLESQPHLNGIAVDFSSEAIQVLKTHKNYLSLNEQGRCVAHVCDITKDELPPEAYIGGGLDVVILLFCLSAISPENMRRSVERLSGALKPGGVLLFRDYGRFDEAQLRFGKGRKLGDNFYVKQDGTRVFYFTCDEVSNLMTT--------------------------------VGLETLEVDFIRRQYANRAQQVARQRVWIHGRFQKRMGS 331          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A1V9ZGM9_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGM9_9STRA)

HSP 1 Score: 231 bits (590), Expect = 4.510e-71
Identity = 131/324 (40.43%), Postives = 168/324 (51.85%), Query Frame = 1
Query:    7 EEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELT----ETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPM 966
            +E L   K   PP   FW++KYEREA KSWDLFY RN  NF+KDRHYL  VFP L     ET  + E                                    LLE+GCGVGNA  PLLE N  L V+A D +P+ + + K+ P++   RC   V D T D LP  + E GGV+  L  F LSA+ P  M      + +A++PGGK+  RDYGR+D+AQLRF  G +L DN YVRQD T +Y+F+ +++++LF                                  A LVE E  ++RRQYANR+Q V R RVW+H  F KPM
Sbjct:   40 QELLSQDKKVVPP---FWQEKYEREAAKSWDLFYKRNTTNFYKDRHYLHLVFPGLAPKENETSTEPEW-----------------------------------LLEVGCGVGNAALPLLEINPRLNVVAIDFAPKAVDLFKEQPLFDPARCHVSVCDITKDALPSVIDEAGGVNFALFMFCLSALRPDKMRDAVAKIASAVRPGGKIFFRDYGRYDQAQLRFKPGHKLADNFYVRQDNTRAYYFTTDEVKELF--------------------------------EAAGLVERENEYIRRQYANRSQNVVRFRVWIHAVFEKPM 293          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A6G0XWX7_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWX7_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.130e-70
Identity = 123/306 (40.20%), Postives = 165/306 (53.92%), Query Frame = 1
Query:   46 LSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKP 963
            + +FW+ KYE+EA K+WDLFY RN+ NF+KDRHYL  VFP+L     D E                                 +  LLE+GCGVGNA  PLLE N  L+V+A D +   +++  + P+Y   RC A V D TAD LP  + E GGV+  L  F LSA+ P  M    + +  A+KPGGK+  RDYGR+D+AQLRF  G +L +N YVRQD T +Y+F++E++RQ+F                                  A ++E E  ++RRQYANR+Q V R RVW+H  F KP
Sbjct:   49 VPEFWQGKYEKEAAKNWDLFYKRNSTNFYKDRHYLHVVFPDLAPHDDDPE---------------------------------KIWLLEVGCGVGNAALPLLEVNPRLHVVAIDFANSAVELFHKQPLYDPSRCNASVCDITADPLPSIIDEAGGVNYALFMFCLSALHPDKMQDAVQKIVNAVKPGGKIFFRDYGRYDQAQLRFKPGHKLAENFYVRQDNTRAYYFTIEEIRQMFVT--------------------------------AGMIERENEYIRRQYANRSQGVVRFRVWIHAIFEKP 289          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A024U4J4_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4J4_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.600e-70
Identity = 123/304 (40.46%), Postives = 163/304 (53.62%), Query Frame = 1
Query:   55 FWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPM 966
            FW++KYE+EA KSWDLFY RN+ NF+KDRHYL  VF +L                   + GD  +               +  LLE+GCGVGNA  PLLE N  L+V+A D + + +++  Q P+Y   RC   V D T D LP  +  +GGV   L  F LSA+ P  M    + +  A+KPGGK+  RDYGR+D+AQLRF  G +L DN YVRQD T +Y+F+++++R LF                                  A LVE E  ++RRQY+NR+Q V R RVWVH  F KP+
Sbjct:   55 FWQNKYEKEAAKSWDLFYKRNSTNFYKDRHYLHLVFSDLAP-----------------KEGDTSDE--------------KTWLLEVGCGVGNAALPLLEVNPRLHVVAIDFAAKAVELFHQQPLYDPSRCHVSVCDITTDPLPAVIDAEGGVHFALFMFCLSALHPDKMQAAVQKIADAVKPGGKIFFRDYGRYDQAQLRFKPGHKLADNFYVRQDNTRAYYFTIDEVRDLFVA--------------------------------AGLVERENEYIRRQYSNRSQGVVRFRVWVHAIFEKPL 295          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A5D6XMV6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMV6_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.620e-69
Identity = 131/314 (41.72%), Postives = 164/314 (52.23%), Query Frame = 1
Query:   46 LSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMNSMAAPV 987
            + +FW+ KYE EA ++WD FY RN+ NF+KDRHYL  VFP+L                         +  PE G          +TLLE+G GVGNA  PLLE    L ++A D +   I +LKQ P+Y   R  A V D T D LP     DGGVD  LL F LSA+ P+ M    R V  +LKPGGKL  RDYGR+D+AQLRF  G +L DN YVR D T +Y+F+ E+LR++  G                                A L   E +++RRQY NR Q V R RVWVHG F+KP  +  APV
Sbjct:   59 IPEFWQRKYETEAARNWDKFYKRNSTNFYKDRHYLHLVFPDL-------------------------DVKPEEGV--------TKTLLEVGSGVGNAALPLLEITPALKIVAIDFADTAIALLKQQPLYDAARVAASVCDITRDPLPAEAFADGGVDFALLLFCLSALHPEKMRAAVRKVAASLKPGGKLFFRDYGRYDQAQLRFGAGHKLQDNFYVRGDNTRAYYFTTEELREIMAG--------------------------------AGLACVENAYIRRQYVNRQQNVVRFRVWVHGIFQKPA-AAPAPV 306          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A067C535_SAPPC (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C535_SAPPC)

HSP 1 Score: 226 bits (575), Expect = 8.640e-69
Identity = 124/303 (40.92%), Postives = 162/303 (53.47%), Query Frame = 1
Query:   55 FWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKP 963
            FW++KYEREA KSWDLFY RN+ NF+KDRHYL  VFP+L                      DG  A  E  +           LLE+GCGVGNA  PLLE N  L V+A D +P+ + + K+ P+Y   R    V D T D LP  + E GGV+  L  F LSA+ P  M      + +A++PGGK+  RDYGR+D+AQLRF  G +L +N YVRQD T +Y+F+ E+++ LF                                  A +V+ E  ++RRQYANR+Q V R RVW+H  F KP
Sbjct:   53 FWQEKYEREAAKSWDLFYKRNSTNFYKDRHYLHVVFPDLAPKE------------------DGTMASSEPQW-----------LLEVGCGVGNAALPLLEVNPNLNVVAIDFAPKAVDLFKEQPLYDPARVHVSVCDITKDVLPAIIDEAGGVNYALFMFCLSALRPDKMQDAVAKIASAVRPGGKIFFRDYGRYDQAQLRFKPGHKLAENFYVRQDNTRAYYFTTEEVQTLF--------------------------------EAAGMVQVENEYIRRQYANRSQNVVRFRVWIHAVFEKP 294          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A2D4C7Y2_PYTIN (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Y2_PYTIN)

HSP 1 Score: 226 bits (575), Expect = 1.040e-68
Identity = 124/309 (40.13%), Postives = 162/309 (52.43%), Query Frame = 1
Query:   55 FWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMNSMAA 981
            FW++KYE+ A KSWD FY +N+ NF+KDRHYL  VFP+L +  AD                                   ++ LLE+GCGVGNA  PLLE N  L+V+A D +   I +LK  P+Y   R  A V D T D+LP     DGGVD  L  F LSA+ P+ M      V  A+KPGGKL  RDYGR+D+AQLRF  G +L DN YVRQD T +Y+ ++E++ ++                                   A LV  E  ++RRQY NR Q V R RVWVH  F+KP+++ +A
Sbjct:   60 FWQEKYEKXAAKSWDKFYKKNSTNFYKDRHYLHIVFPDLDKNDADPS---------------------------------KKVLLEVGCGVGNAALPLLEVNPSLHVVAIDFADSAINLLKTQPLYDPTRVHASVCDITNDELPAXAHADGGVDFALFLFCLSAIHPEKMQAAVNKVVAAIKPGGKLFFRDYGRYDQAQLRFKPGHKLQDNFYVRQDNTRAYYXTIEEVERMM--------------------------------EAAGLVRVENEYIRRQYVNRQQNVVRFRVWVHAVFQKPLSTGSA 303          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A0P1AJ61_PLAHL (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ61_PLAHL)

HSP 1 Score: 224 bits (571), Expect = 3.560e-68
Identity = 125/306 (40.85%), Postives = 164/306 (53.59%), Query Frame = 1
Query:   46 LSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKP 963
            + +FW++KYE+E+ KSWD FY RN+ NF+KDRHYL  VF +L+                          +PE G          RTLLE+G GVGNA  PLL+ N  L+++A D +   I +LK+ P+Y   R  A V D T D LP +  E+GGV+  L  F LSA+ P  M      V  A+KPGGKL  RDYGR+D+AQLRF  G +L DN YVRQD T +Y+F+ E+++++F                                 G  +VE E  ++RRQYANR Q V R RVWVH  F KP
Sbjct:   57 IPEFWQNKYEKESAKSWDKFYKRNSTNFYKDRHYLHLVFKDLS-------------------------VVPEGGE--------TRTLLEIGSGVGNAALPLLKINPALHIVAIDFADSAIDLLKKQPLYDQNRVSASVCDITKDPLPDAAFENGGVNYALFMFCLSALHPDKMKAAVMKVVAAIKPGGKLFFRDYGRYDQAQLRFRSGCKLQDNFYVRQDNTRAYYFTTEEIKEIFTAA------------------------------GLCMVENE--YIRRQYANRQQNVVRFRVWVHAIFEKP 297          
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Match: A0A3R7K125_9STRA (tRNA N(3)-methylcytidine methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K125_9STRA)

HSP 1 Score: 224 bits (571), Expect = 4.810e-68
Identity = 128/309 (41.42%), Postives = 166/309 (53.72%), Query Frame = 1
Query:   46 LSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRRTLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCEALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMNS 972
            + KFW++KYE+EA KSWD FY RN+ NF+KDRHYL  VF +L                           +PENG          +TLLE+G GVGNA  PLLE N  L ++A D +   I++LK+ P+Y   R  A V D T D LP + L +GGVD  L  F LSA+ P  M    + V   +KPGGKL  RDYGR+D+AQLRF  G +L +N YVRQD T +Y+F+ E++ +LF                               + G  +VE E  ++RRQYANR Q V R RVWVH  F KP ++
Sbjct:   57 IPKFWQNKYEKEAAKSWDKFYKRNSTNFYKDRHYLHLVFKDLG-------------------------VVPENGQ--------TKTLLEVGSGVGNAALPLLEVNPALKIVAIDFADSAIELLKKQPLYDEARVAASVCDITNDPLPDAALANGGVDFALFLFCLSALHPDKMKDAVKKVVATIKPGGKLFFRDYGRYDQAQLRFKPGCKLQENFYVRQDNTRAYYFTTEEVEELFT------------------------------ESGLEVVENE--YIRRQYANRQQNVVRFRVWVHSIFVKPTSA 300          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig618.16879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI62_9PHAE1.150e-21491.02tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
A0A7S2MQY1_9STRA9.190e-7744.48tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A1V9ZGM9_9STRA4.510e-7140.43tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A6G0XWX7_9STRA1.130e-7040.20tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A024U4J4_9STRA3.600e-7040.46tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A5D6XMV6_9STRA2.620e-6941.72Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067C535_SAPPC8.640e-6940.92tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
A0A2D4C7Y2_PYTIN1.040e-6840.13tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A0P1AJ61_PLAHL3.560e-6840.85tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A3R7K125_9STRA4.810e-6841.42tRNA N(3)-methylcytidine methyltransferase n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig618contigEcto-sp13_S_contig618:4530..9176 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score606.3
Seed ortholog evalue8.6e-171
Seed eggNOG ortholog2880.D7G2E0
Model size990
KEGG rclassRC00003,RC00113,RC00392,RC01244
KEGG koko:K00599
KEGG ReactionR02671,R02912,R03955,R04939
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.tRNA (cytosine) methyltransferase activity
EggNOG OGsKOG2361@1,KOG2361@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-00_005800.1
Cds size990
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig618.16879.1prot_Ecto-sp13_S_contig618.16879.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig618 4530..9176 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463860.556756-CDS-Ecto-sp13_S_contig618:4529..48171681463860.556756-CDS-Ecto-sp13_S_contig618:4529..4817Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig618 4530..4817 -
1681463860.5703394-CDS-Ecto-sp13_S_contig618:5219..52861681463860.5703394-CDS-Ecto-sp13_S_contig618:5219..5286Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig618 5220..5286 -
1681463860.581222-CDS-Ecto-sp13_S_contig618:6463..66641681463860.581222-CDS-Ecto-sp13_S_contig618:6463..6664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig618 6464..6664 -
1681463860.591733-CDS-Ecto-sp13_S_contig618:7772..80021681463860.591733-CDS-Ecto-sp13_S_contig618:7772..8002Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig618 7773..8002 -
1681463860.6049457-CDS-Ecto-sp13_S_contig618:8647..87061681463860.6049457-CDS-Ecto-sp13_S_contig618:8647..8706Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig618 8648..8706 -
1681463860.6151762-CDS-Ecto-sp13_S_contig618:9031..91761681463860.6151762-CDS-Ecto-sp13_S_contig618:9031..9176Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig618 9032..9176 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig618.16879.1

>prot_Ecto-sp13_S_contig618.16879.1 ID=prot_Ecto-sp13_S_contig618.16879.1|Name=mRNA_Ecto-sp13_S_contig618.16879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp
QEEEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYL
GKVFPELTETGADLELAQGLEKSEVYRNGDGGEAIPENGFRRKVRRLGRR
TLLELGCGVGNAVFPLLEENRGLYVIAADLSPRGIQVLKQHPMYSCGRCE
ALVLDATADDLPPSVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALK
PGGKLLVRDYGRHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQL
FCGGSPDGSGLRDGSSSSSSSTCSDQSNRGWFDGGASLVEEELSFVRRQY
ANRAQKVARRRVWVHGKFRKPMNSMAAPV*
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mRNA from alignment at Ecto-sp13_S_contig618:4530..9176-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig618.16879.1 ID=mRNA_Ecto-sp13_S_contig618.16879.1|Name=mRNA_Ecto-sp13_S_contig618.16879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4647bp|location=Sequence derived from alignment at Ecto-sp13_S_contig618:4530..9176- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAAGAAGAGGCGCTGCAATCTGTCAAGGGTAAGGGGCCACCTCTGTC CAAGTTCTGGAGAGACAAGTACGAGAGAGAGGCGAGGAAGAGCTGGGACT TGTTCTACGGCCGTAACGCCGGGAATTTCTTCAAGGACCGACACTGTGAG ATAGTAAGAACTTTCAGTCGCACCGTTCTCACGAACACTTCTCGGTGTCC CCTACCAACTTCTGGTGGCTTTTCTACCTGGTAGATCGTAGCCAAAAGCG TAGAGTATTTGACACTTCTCAATCAATTGTCATGAGTAGCAAACACCCGA GCATCAGACCCTTCTCCGCATCGGCCGCGATTGTCTGAAAGCTCGTTCGT CTCCTAATTGTGCTGTCGGTGTCACCCGCCCAACCTCTTCTCTTTTTCCC TTGTTTGTTTTTCCGGCCTAACCGATTTGATGATGATGGGTGTGGGATGT GGACGGCAACGCTCGAGAAGATCTGGGAAAGGTTTTTCCGGAGCTGACTG AAACCGGCGCCGACTTGGAGTTGGCACAAGTGAGAAGTATTGGTCGTGTT TTTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGGTGGTGGTGTTGGTGTTGGTGGTGGTGGCGCTGTCGATGATGTTCTT GGTGTTGATCTTGGAAGTGGTGGCGGTGATAGTGATGGTGATGGTGACGG TGTTGTTGTTGGTGGTGTTGCCTTTGTTGTCGTTGGTGGTGGTTGTGGTG TTGGGGGTTGTTGTGGTGGTGGTGTTGTATTTGCTGCACAAAGAATCGTG CATTCAGAGTTTCGTTCCCCTTTCTGGAAGAAGCATCAGTAAGCGCAGCA GTGAATACAACGCGTGTTCCTTTGTTGTAGTTCTCTGATGGCTCTCCGGC TTGTGCCGTTCCCTCTTTTCGCGACACTCTCTGCAAAAGACATTCTGCGA GGGTCCTGCTTGTCGTATCGAGTTGGCTCTGGCTCTGGCCTTAGCAACAA ACCGTCACCACCCCCATCTTCACCATCGGATGTATGAGGTAATTTCCGTG TTCAATCTCGCATTTATTTGTTCGTGTGATGAACAACATCACGGAGACTC GAAAAAATGGAGGAAATTCATCCATATGCGCGATCGCGCACTCGTGCTTT CATGTGTGGTTCACAAATCCACAGGGGCTCGAAAAATCGGAAGTTTATCG CAACGGCGATGGCGGTGAGGCCATTCCCGAGAACGGTTTTCGGAGAAAGG TTCGTCGGCTGGGCAGAAGGACGCTGTTGGAGCTCGGTTGCGGCGTGGGC AACGCGGTGTTCCCTCTCCTCGAAGAGAACCGTGGGCTCTACGTCATCGC GGCAGACCTGTCTCCTAGAGGGATCCAGGTGCTCAAGCAGCACCCCATGT ACAGGTGAGAGAGATGGAGAGAGAGAATGAGAGAGAGAGAGAGAGAGAAA GATAGGTCGGGATCTCACGTCGTAGTCAGGAGCATTACCATCAGCCAGGC CCAGAACCCCCGTTACAGACACTCGGCGGTTGGATGGACTGGGAGTGGCG GAAACGGGAGTGCAATCACGGTGCTGGCGAGCGCTCACTCCTCGCACCGA CTCGTCCCCCAGCGGATCGTGCTGGCAGATATAGAACCGACGGCACTGTG TACTCCGAGCAGGGGGGAAGCGGTGTGCGTTTAGTGCCAGCAGGCGGGTG GCTGGGAGGAGCGTGTCATGATACTGTGTGATTTTCCCGCCGAAGACGAC AATGTGGATCACCATGAACCACACCATGGAATACAGCACTTTCGATCTTG TCTTCCCCCGCTGTTTTGCGCGTTCGTTTCGGCTGCGGGCGGTGCGAGCG CGTCCGTGGTAGTGGCGGACCCCTTTCTTCCCCCCCTACCCCTGAGCGTT AAAAGTTGAAGAATCATCGCAACAATTTTTGCATCGTTGTGTTGTTGTCG TCGTCGTCATCGTCATCGTCGTCGCGTCGTTGCTGTAGAGATTCAAGTGT TTGTGTGTGTACTCGGCAGGATACGAATCTCCGAGATCTCCGGGGGGGGG GGGGGGGGGAGGAAGAAAAAACCATGTGGGGTTGGTGGAACAAAAGCCGA TCAGCTTTTTGTCCCCTCCCCATGTTTATCCTNNNNNNNNNNTCTGTGGT TGTTGTGGTGTTGTTGGGTGGGGGGGTGTGGTTGGTTGGGGGGGGGGGGG GGGGGTGTAGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGTACGCAGA TAGATACATGATGGGTGTGATGGACATAACGCGCTAGACTCTGCTTGCCT GCCCCATGTGTCACTCTCTAAATAATCGAAGAACTTGCGTCACTCCTTCG TGCATAACGCTGTCGACAGGAGCCCCCGAGCGTGATAACATGGCACGCGC GCCGACATCACAAACGCATTGCGCCTCTGATGAGCGTCCCCAAGCAACAC CATCACACCGTAAACCTATCTCGTTCGTTTCCTCCTCGCCCCGCCATTGC TGCACCCCCCAGCTGCGGGCGGTGCGAGGCCTTGGTGCTAGACGCTACCG CCGACGACCTCCCCCCCAGCGTGTTGGAAGACGGAGGCGTGGACTTGGTC CTGCTGCAGTTCAGCCTGTCGGCAGTAGCTCCCAAAGACATGGCGACGGT GGCCAGGCTCGTCGAGACGGCGCTCAAGCCCGGGGGCAAGCTGCTCGTGC GGGACTACGGCAGGTGAGCACCGATGCTGCAGCGATACGAACGTGGGGCA ACATGCCCCCGCAACAAGGAAGGGGGGTCATGGCTGTTCGCGTCACCCCG GAAGCTTCTGCCACGAGCCGTAAGCGTCTCCAACATCGTGTGTGGTTATT GTTAGCGTTGACCAAGCCAACCTACTGACGAACGGATATATATCAGTCTC GGTGTTGTTGAAAACAAAGAAAACCCTTGCGAAGGCCATGATCTTGGACC CTGTGAGGGGACGTCGTGGGGGAGGCTAACCTTCTCTCCGTATTTAAGAC ACAAACGGTGTGTGTGTTGATCCCCGTTCTTTTCTGGTATATATTCGTGC CAAGTCCACATCTCTCGGTTAATAAATGACGTGTCAGCCGGGAGTCGCAG AGGAAAACATAGCACCGGGACTGTTGCTTTTTCGTTTTTTCTTGCCCTGC AACAAATCTTTCCATGTGTGGCCTCCGCATTCTCACGTACTTACTATTTT CTCTCGCCAGAGCTTTTTCTCTCTGTATTTTGTTCTTTGTCGAAGTGCAT TTTTTGATGATGCGCGTGTATCGTTCGCCTCCGTTCGTCTTAAGAGATAT CGACATGACGCACCGGGCGAGCTTGCTCTTTCGAGGTTTCGTTGAAGGAG CGTGTTGAAATGTACATCTACCAAGCGCATCGATGAGTTATTGGAAAAAA CGTTGAGGTTGAGTTTCCATTCCCATCATGCCGGTCGCCCCGGTAGTCTA GTCGGTGTTATCGAAAACCTTCTGCAGTAGTGGTCAGGGTCAGAGGTTCG GTCCCGACGTACGCGAGCGTTTCTCGCAAAGTGAGTTTTTTGTCTCGCTT CCGTTCCTAGGCCCGGGTGGAAAGCGCTAGCTCGTATGCACATAGAGGGA AAAGAGTGCTGCACTCTTCTCGCATTTAATATCGAAGGCGAAGTACCGCA GGAGGGGTGGATAGGGAGAGGAACCCTTCTGTGTGACCGCGGGTTGAAGT AGAAGGCACAAATGCTGTGAGCGCTGATTTGAAGTGAAGACAAACAAACA AGAACGTCATCATGCTCCACTGCCGGAACAAAACAATCCCGCCCTTTGTT GCTACTTCTGGTGTAGAGCTCGGCTGTGTACTGTTTGTAGGAAACGGCTG AAGTACTGCCCCCGGCGCGTTGTCCCCCCCCCCGCTTTAGGCATGATGAA GCGCAGCTACGGTTTGCGAAAGGACGGCGATTGGGCGACAACGTCTACGT CCGACAGGTGACCCTCCTTCTTAACCCTAAAGTCATACCATCATACTTTG ATACGGTCGGACCGCAACGGACCTTCCAGTCCGTAGGACTTTCAAACCAG CATCCCCTACCCAAGCCACCCACCACTTTTGCGTGCCGATGTCTTCGGGG CGCCGGGACATTAGGCACCGTGGATGTACGTGAAAGGGTGAATTGTTTCG TTCGAATAGTGACGGCAGCACGGCGGGCCCTCGGTTTGCAAAACACGAGC TACGTAGCTCTGACTTTAGTGACAGCAGTGCTTCAGAGTGTTCTGACACG AAGGCACCACAAACCACAAAACCTCCATCTTCCAACATCCCCCGACAGTA CCCATTGCGCTGTTTTCCACATTCGAACCGTGTCACCGAAACGTTTTTAT CCGCTTCAGGACGGTACGACGAGCTACTTTTTTTCCTTGGAAGACCTGAG GCAGCTCTTCTGCGGCGGTTCTCCTGACGGTTCGGGACTTCGAGATGGCA GCAGCAGCAGCAGCAGCAGCACTTGTTCCGACCAGAGCAACCGCGGGTGG TTTGACGGGGGGGCAAGCCTGGTCGAAGAAGAGCTGTCATTCGTTAGGAG GCAGTACGCGAATAGGGCGCAGAAGGTGGCGCGGAGGAGAGTGTGGGTAC ACGGAAAATTCCGAAAACCGATGAACTCGATGGCGGCACCGGTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig618:4530..9176-

>mRNA_Ecto-sp13_S_contig618.16879.1 ID=mRNA_Ecto-sp13_S_contig618.16879.1|Name=mRNA_Ecto-sp13_S_contig618.16879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig618:4530..9176- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAAGAAGAGGCGCTGCAATCTGTCAAGGGTAAGGGGCCACCTCTGTC
CAAGTTCTGGAGAGACAAGTACGAGAGAGAGGCGAGGAAGAGCTGGGACT
TGTTCTACGGCCGTAACGCCGGGAATTTCTTCAAGGACCGACACTATCTG
GGAAAGGTTTTTCCGGAGCTGACTGAAACCGGCGCCGACTTGGAGTTGGC
ACAAGGGCTCGAAAAATCGGAAGTTTATCGCAACGGCGATGGCGGTGAGG
CCATTCCCGAGAACGGTTTTCGGAGAAAGGTTCGTCGGCTGGGCAGAAGG
ACGCTGTTGGAGCTCGGTTGCGGCGTGGGCAACGCGGTGTTCCCTCTCCT
CGAAGAGAACCGTGGGCTCTACGTCATCGCGGCAGACCTGTCTCCTAGAG
GGATCCAGGTGCTCAAGCAGCACCCCATGTACAGCTGCGGGCGGTGCGAG
GCCTTGGTGCTAGACGCTACCGCCGACGACCTCCCCCCCAGCGTGTTGGA
AGACGGAGGCGTGGACTTGGTCCTGCTGCAGTTCAGCCTGTCGGCAGTAG
CTCCCAAAGACATGGCGACGGTGGCCAGGCTCGTCGAGACGGCGCTCAAG
CCCGGGGGCAAGCTGCTCGTGCGGGACTACGGCAGGCATGATGAAGCGCA
GCTACGGTTTGCGAAAGGACGGCGATTGGGCGACAACGTCTACGTCCGAC
AGGACGGTACGACGAGCTACTTTTTTTCCTTGGAAGACCTGAGGCAGCTC
TTCTGCGGCGGTTCTCCTGACGGTTCGGGACTTCGAGATGGCAGCAGCAG
CAGCAGCAGCAGCACTTGTTCCGACCAGAGCAACCGCGGGTGGTTTGACG
GGGGGGCAAGCCTGGTCGAAGAAGAGCTGTCATTCGTTAGGAGGCAGTAC
GCGAATAGGGCGCAGAAGGTGGCGCGGAGGAGAGTGTGGGTACACGGAAA
ATTCCGAAAACCGATGAACTCGATGGCGGCACCGGTGTAG
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