mRNA_Ecto-sp13_S_contig6112.16795.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE) HSP 1 Score: 273 bits (698), Expect = 9.590e-89 Identity = 240/252 (95.24%), Postives = 242/252 (96.03%), Query Frame = 1
Query: 4 QAFRNNSDTDDGGGDGATDLWRGSGLILAGNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWNGLTFSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEWTCHMXXXXXXXXXXXXXIQNGCRYDSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGGHRRVAEWIVAN 759
+AFRN GGGDGATDLWRGSGLILA NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWG RPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGC WNGLTFSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEWTCHMXXXXXXXXXXXXXIQNGCRYD+VTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRG HRRVAEWIVAN
Sbjct: 30 RAFRNXXXXXXGGGDGATDLWRGSGLILADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEWTCHMXXXXXXXXXXXXXIQNGCRYDNVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGSHRRVAEWIVAN 281
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: D7FH77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH77_ECTSI) HSP 1 Score: 104 bits (259), Expect = 5.880e-23 Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 94 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWNGLT 369
N D+L ++ FVA++ FLFF PV R WR AWG RP T T D + +QL+ F+ GL R PELCAAIARLG+++LL AR +GC W T
Sbjct: 12 NPDILGCLISFVADESFLFFGPVCRDWRAAWGNRPTTTRIATSDLTPTQLQRGFDCGLTRTNPELCAAIARLGDVDLLELARDNGCRWGAST 103
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.050e-22 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 94 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVW 357
N+D++ + +FV +KQFLFFA VSR+WR+AWG R VTSWVT ++ QL+YSF GL RD + C AR GNL+LLR A GC W
Sbjct: 22 NMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWATEQGCPW 109
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 8.180e-21 Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 97 VDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 360
VD++ ++ FV + Q+LFFA VSR WR+ WG RP VT +T D+SV QL SFE GL R +C +A LG L+LLR AR GC WN
Sbjct: 7 VDIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRT-AAVCETVAGLGRLDLLRRARAMGCQWN 93
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: D7FH78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH78_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.210e-20 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 1
Query: 94 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 360
N ++L + +FV + QFLFFAPV++ WR AW RP +T+ VT D++ SQL++SFE GLP+++ LCAA+ARLG L LL A G+GC N
Sbjct: 112 NRNILLCLAQFVPDNQFLFFAPVAKGWRAAWQ-RPTITAHVTPDTTTSQLQHSFECGLPQNQTGLCAALARLGKLNLLACAVGAGCPMN 199
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 3.480e-20 Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 97 VDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 360
VD++ ++ FV + Q+LFFA VSR WR+ WG RP VT +T D+SVSQL SFE GL R +C +A LG L+LLR AR GC WN
Sbjct: 9 VDIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRT-AAVCETVAGLGRLDLLRRARAMGCPWN 95
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.180e-19 Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 82 ILAGNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 360
++ NV LL + FV + Q LFFA VSR WR+ WG RP VT +T D+SV QL SFE GL R +C +A LG L+LL+ AR GC WN
Sbjct: 20 LVTANVYLLSYLAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRT-AAVCETVAGLGRLDLLQRARAMGCPWN 111
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 2.110e-18 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 100 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWNGLT 369
D+ +V FV +QFLFFA V RAW+EAWG RP T VTED++V+QL +F+ GL ++C ++A+LG L+LL+ AR GC WN +T
Sbjct: 10 DVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLI-ADVCTSVAKLGRLDLLQCARRHGCAWNEVT 98
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 7.710e-15 Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 118 VRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGS-GCVWNGLTFSEAA 384
+ FV +Q+LFFA VSR WR+AW GRP T VT D+ V QL SFE GL R R +C IA LG L+LL SAR C W+ T S A+
Sbjct: 1 MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLAR-RSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYAS 89
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.730e-13 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 100 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGGRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSG-CVWNGLTFSEAA 384
D++ ++ FV +Q++FFA VSR WR+AW GRP T T D+ V QL SF+ GL R +C IA LG L+LL SAR C W+ T S A+
Sbjct: 9 DIVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLA-PRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCAS 103 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6112.16795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6112.16795.1 >prot_Ecto-sp13_S_contig6112.16795.1 ID=prot_Ecto-sp13_S_contig6112.16795.1|Name=mRNA_Ecto-sp13_S_contig6112.16795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MQAFRNNSDTDDGGGDGATDLWRGSGLILAGNVDLLRSIVRFVAEKQFLFback to top mRNA from alignment at Ecto-sp13_S_contig6112:7390..8151- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6112.16795.1 ID=mRNA_Ecto-sp13_S_contig6112.16795.1|Name=mRNA_Ecto-sp13_S_contig6112.16795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6112:7390..8151- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6112:7390..8151- >mRNA_Ecto-sp13_S_contig6112.16795.1 ID=mRNA_Ecto-sp13_S_contig6112.16795.1|Name=mRNA_Ecto-sp13_S_contig6112.16795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6112:7390..8151- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |