mRNA_Ecto-sp13_S_contig6025.16643.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6025.16643.1
Unique NamemRNA_Ecto-sp13_S_contig6025.16643.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A6H5JE24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE24_9PHAE)

HSP 1 Score: 620 bits (1600), Expect = 8.650e-217
Identity = 330/333 (99.10%), Postives = 330/333 (99.10%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAAKGSRGGDADGDDEAGLSLLTRTGAPSESAA 1001
            SVGVLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKED KGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAAKGSRGGDADGDDEAGLSLLTRTGA SES A
Sbjct:   78 SVGVLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDTKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAAKGSRGGDADGDDEAGLSLLTRTGASSESTA 410          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: D7G783_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G783_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 8.910e-155
Identity = 240/245 (97.96%), Postives = 244/245 (99.59%), Query Frame = 3
Query:  267 MKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAAKGSRGGDADGDDEAGLSLLTRTGAPSESAA 1001
            MKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGW+YVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALW+EGPLFQGWTV+AGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAA G+RGGDADGDDEAGLSLLTRTGAPSESAA
Sbjct:    1 MKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGWEYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWDEGPLFQGWTVSAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAATGARGGDADGDDEAGLSLLTRTGAPSESAA 245          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A7S3RKY8_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RKY8_EMIHU)

HSP 1 Score: 241 bits (616), Expect = 1.290e-69
Identity = 134/291 (46.05%), Postives = 191/291 (65.64%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTVMTL-ADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSY---VSAGKEDKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPL--FQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAP 857
            S G L ET+S+SSVL+  EV K+  S    + +D+ S    G+ + K A+L+  S  M +PAVV+  MN+L +VSLK +DA+TF + AQMK+ TTAIFSVVL+ R  H RKWRAL+ L LGV L+S+ +     +AG    K    ++++G+AA + +V LSGFVS++FEKVLKS+    SVWDRNFQLA +SI+ Y P+ +  + P   F GWT  A + + +G  GG+LVAL++KY D+++KT AT+GAI+ T +     L  P  +PI  GA   ++S+ NY+D G P
Sbjct:   99 SRGALRETYSTSSVLLVMEVAKMALSAFQIVTSDAPSDVPSGSALSKYAYLITHSLTMLVPAVVYLAMNILGFVSLKYIDAATFAILAQMKVFTTAIFSVVLLQRKLHLRKWRALLTLTLGVVLISHEAMPKSAAAGDSRAKLAFAEFLLGIAASVGDVVLSGFVSIYFEKVLKSKTETYSVWDRNFQLAFWSILIYTPIMI-HDNPRQPFAGWTPMAAVCAAVGGTGGVLVALSIKYADSIMKTIATTGAIVFTTILNAAFLDGPFTLPIVAGAVVVMVSVCNYNDRGDP 388          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A482SUX6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUX6_9ARCH)

HSP 1 Score: 238 bits (606), Expect = 7.360e-69
Identity = 127/294 (43.20%), Postives = 192/294 (65.31%), Query Frame = 3
Query:   18 NETWSSSSVLMAGEVIKLVFSTVMTLADS---GSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMAL----------WEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPV 860
            NE  SS  +L   EV+K+VFS  M L++      + A GTG++KL WLV  S  M I A ++  MN+LS+V+L+ + A  FT+CAQ+KIL+TA FSV+++  S    KWRAL LLV G  LV++ ++ ++G E+    G   + G AAVL EV LSGF S++FEKV+KS    +++W+RNFQL +YS++ Y  + +          W++   +  W+V   +++VLG+AGG+LVA T+KY D++LKT A +GAI+++ V GH+ L  PLD+ I +GA  T++++ NY+ D  PV
Sbjct:   44 NENVSSKEILFVSEVLKIVFSVYMILSEDIEGAKSDAPGTGIQKLTWLVTNSKKMLILAAIYGAMNILSFVALEYIGAGEFTICAQLKILSTAGFSVLILRTSLSPTKWRALTLLVFGCILVASPNFNNSGSENNALTG--QLFGYAAVLTEVVLSGFASIYFEKVVKSTTEVITIWERNFQLGLYSLLMYGGIIMYESIFADDEAWDKRAAWSNWSVITVLVAVLGAAGGLLVAATLKYADSILKTLAAAGAIVLSTVLGHYLLTGPLDVVISIGAIVTIIAIANYTLDATPV 335          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A6T7FS09_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7FS09_9EUKA)

HSP 1 Score: 235 bits (599), Expect = 1.160e-66
Identity = 129/290 (44.48%), Postives = 193/290 (66.55%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTV-MTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSN-GSYVSAGKEDKKGVG---WQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEE--GPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDG 851
            S G L ET+S+SSVL+  EV K + S V + ++D  S    G+ + K  +L+R    M +PA+++ VMN L +++L  +DA+TF++ AQMK+ +TAIFSV+++GRS   RKWRAL  L LGV L+SN G  VS+G     G      +Y++G+AA   +V+LSGFVS++FEKVLKS+    SVWDRNFQLA +SI+ Y+P+ +++    PL+ GWT  A + + +G  GG+LVAL++K  D+++KT AT+GAI++T       L  P+ +PI  G    ++S+ NY+D G
Sbjct:  141 SRGALRETYSTSSVLLVMEVCKFLLSAVQVVVSDDPSDVPSGSAMSKYIFLIRNGLVMAVPAIIYLVMNFLGFIALTHIDAATFSIVAQMKVFSTAIFSVLVLGRSLAPRKWRALATLTLGVMLISNEGKPVSSGPNVSLGNDKALLEYLLGLAACFGDVALSGFVSIYFEKVLKSKTETYSVWDRNFQLAFWSILVYVPIMIYDHPTNPLY-GWTPMAAVCAAVGGIGGVLVALSIKLADSIMKTIATTGAIVLTTALNAGFLDGPMSLPIITGGLVVLISVCNYNDTG 429          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A7S3AS17_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AS17_9EUKA)

HSP 1 Score: 229 bits (583), Expect = 4.110e-65
Identity = 128/285 (44.91%), Postives = 191/285 (67.02%), Query Frame = 3
Query:   12 VLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTS--AEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKE-DKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWE--EGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDG 851
            +++ET+S+SSVL+A E  KL+ S    L + G  S   +GT + K  +L+R S  M +PAV++ +MN+L +V+L  +DA+TF++ AQ+K+ +TA+FSV ++GRS   RKWRAL  L LGV L+S+ +        +K+     ++IG+AA L+EV LSGF S++FEKVLKS+    SVWDRNFQLA +S   YLP+  ++  E P F GWT   G  + +G+ GG+LVAL++K+ D+++KT AT+GAI++T +     L  PL +PI  GA   V+S+ NY+D G
Sbjct:   76 IMHETYSTSSVLLAMEAAKLLLSAER-LVNCGLPSDVPDGTAISKYCFLIRTSHKMAVPAVIYLIMNILGFVALAHIDAATFSIVAQLKVFSTAMFSVTVLGRSLPWRKWRALTTLTLGVILISHEAMPKNNNSAEKQRALSDWLIGMAACLSEVLLSGFASIYFEKVLKSKTETYSVWDRNFQLAFWSSAIYLPIMCYDNPEHP-FTGWTWVTGGCAAVGALGGVLVALSIKHADSIMKTIATTGAIVLTTILNVVFLDGPLSLPIFSGALVVVVSVFNYNDRG 358          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A0M0JIG0_9EUKA (Udp-n-acetylglucosamine n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JIG0_9EUKA)

HSP 1 Score: 226 bits (576), Expect = 3.670e-64
Identity = 131/293 (44.71%), Postives = 189/293 (64.51%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTS--AEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGS-----YVSAGKEDKKGVGWQ--YVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEE-GPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDG 851
            S G L E +S+SS L+  EV+K++ S    +A  G  S    GT V K ++L+  S  M +PAV + VMN+L +++L+ +DASTF++ AQMK+ TTA+FSV+++GRS H RKWRAL  LVLGV L+SN +     +   G+ D K       + IG+AA   +V LSGFVS++FE VLKS+    SVWDRN QLA +S++ Y P+ L++     F GW+V   + +  G+ GG+LVAL++KYTD+++KT AT+G+I++T V     L  P  +PI  G    V+S+ NYSD G
Sbjct:   68 SRGHLQERYSTSSALLVMEVVKILLS-AQQIAFGGHQSDVPSGTFVSKFSFLIAHSWKMIVPAVTYLVMNILGFMALQHLDASTFSIIAQMKVFTTAVFSVLILGRSLHMRKWRALTTLVLGVILISNEAMPKMAHRRLGQLDSKTSEQMRSFAIGMAASFGDVLLSGFVSIYFEMVLKSKTETFSVWDRNLQLAFWSMLIYAPIMLYDRPNDPFGGWSVITLLCAACGALGGVLVALSIKYTDSIMKTIATTGSIVLTTVLNAAFLQGPFTLPILTGTIVVVISVFNYSDPG 359          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A7S0EIZ6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EIZ6_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 5.910e-64
Identity = 128/290 (44.14%), Postives = 187/290 (64.48%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTVMTL-ADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGWQ-----YVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEE-GPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDG 851
            S G L ET+S+SSVLM  E  K++ S  M + A + S    G+   K  +L+R S  M +PAVV+ VMN+L +V+L  +DA+TF++ AQMK+ TTA FSV+++ R    RKWRAL  LV+GV L+S+ S   + K        +     ++IG+AA L +V LSGFVS++FEKVLKS+    SVWDRNFQLA +S+V YLP+ +++     F GW+    + + +G+ GG+LVAL++K  D+++KT AT+GAI++T       L  P  +PI  GA   V+S+ NY+D+G
Sbjct:   76 SRGHLRETYSTSSVLMVMEASKMLLSMGMIVYAGAPSDVPSGSAGSKYFFLLRHSQKMMVPAVVYLVMNILGFVALGNIDAATFSIIAQMKVFTTATFSVLMLNRGLAPRKWRALTTLVIGVVLISHESMPKSLKTGATSAAHERQMTEWLIGMAASLGDVVLSGFVSIYFEKVLKSKSETYSVWDRNFQLAFWSMVIYLPIMIYDNPNNPFAGWSGTTAVCAAVGALGGVLVALSIKLADSIMKTIATTGAIVLTTALNAVFLDGPYSLPIASGALVVVVSVFNYNDNG 365          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A7S0IMW4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IMW4_9EUKA)

HSP 1 Score: 224 bits (572), Expect = 1.950e-63
Identity = 128/294 (43.54%), Postives = 188/294 (63.95%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTV-MTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSY--VSAGKE----DKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWE--EGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAP 857
            S G L E +SSSSVL+  E+ K + S V + ++D  S    GT   K  +L+R    M +PA+++ VMN L +++L  +DA+TF++ AQMK+ +TAIFSV+++GR    RKWRAL  L LGV L+S+ +    S+G      DK  V  +Y  G+AA   +V LSGFVS++FEKVLKS+    SVWDRNFQLA +SI+ Y+P+ ++E  + P F GWT  A + + +G  GG+LVAL++K  D+++KT AT+GAI++T       L  P+ + I  G    ++S+ NY+D G P
Sbjct:   84 SRGSLREKYSSSSVLLVMEIAKFLLSAVQIVVSDEQSDVPSGTAFSKYIFLIRHGLVMAVPAIIYLVMNFLGFIALTHIDAATFSIIAQMKVFSTAIFSVIVLGRRLAPRKWRALATLTLGVMLISHEAMPRTSSGGSTLIGDKAFV--EYFFGLAACFGDVMLSGFVSIYFEKVLKSKTETYSVWDRNFQLAFWSILIYVPIMMYEHPKNP-FYGWTPMAAVCAAVGGIGGVLVALSIKLADSIMKTIATTGAIVLTTALNAGFLDGPMSLTIISGGLVVLISVCNYNDQGDP 374          
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Match: A0A6U3ZA06_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZA06_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.120e-62
Identity = 129/292 (44.18%), Postives = 186/292 (63.70%), Query Frame = 3
Query:    3 SVGVLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVSAGKEDKKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPL---FQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAP 869
            S GVL E +S   VL+ GE+IK V+S       S   S     V KL +L++ S  M + A ++  MN+LS+V+L+ + A  FTV AQ+KILTTA  S V++ RS+   KWRAL+ L++GV L S   +   G   K   G   ++G AAVL EV+LSGF S++FEKV+K+    L +W+RN+QLA  SI  Y+    WE+G +   F GW+V AGIL++LG+AGG+LVAL++K+ D++LKT AT+GAI+++A   H+ LG PL   + +     V+S+ NY+ D +P  AP
Sbjct:   67 SQGVLKEIYSKYEVLLVGELIKFVYSAYKI---SSELSQGEKAVPKLRYLLKRSSKMAVLACIYGAMNILSFVALRNISAGMFTVFAQLKILTTATCSSVMLNRSYSMTKWRALISLMMGVLLFSEPIWNRDGN-SKNPEGGNVMLGTAAVLIEVTLSGFASIYFEKVIKTDPEQLGIWERNYQLAFGSIPIYVMFMFWEDGGIAGYFGGWSVVAGILALLGAAGGMLVALSIKHGDSILKTLATTGAIVLSAALDHYLLGGPLTNIMCIAGVIVVISICNYTFDMSPPEAP 354          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6025.16643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE24_9PHAE8.650e-21799.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G783_ECTSI8.910e-15597.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3RKY8_EMIHU1.290e-6946.05Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A482SUX6_9ARCH7.360e-6943.20Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6T7FS09_9EUKA1.160e-6644.48Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3AS17_9EUKA4.110e-6544.91Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A0M0JIG0_9EUKA3.670e-6444.71Udp-n-acetylglucosamine n=1 Tax=Chrysochromulina t... [more]
A0A7S0EIZ6_9EUKA5.910e-6444.14Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0IMW4_9EUKA1.950e-6343.54Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A6U3ZA06_9STRA1.120e-6244.18Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6025contigEcto-sp13_S_contig6025:2794..6701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score454.9
Seed ortholog evalue3.1e-125
Seed eggNOG ortholog2880.D7G783
Model size2070
KEGG koko:K15272
KEGG TC2.A.7.12
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG free text desc.pyrimidine nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG2234@2759
Ec32 ortholog descriptionUDP-galactose transporter
Ec32 orthologEc-01_010710.1
Cds size957
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6025.16643.1prot_Ecto-sp13_S_contig6025.16643.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6025 3945..6654 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463839.0707812-UTR-Ecto-sp13_S_contig6025:2793..34851681463839.0707812-UTR-Ecto-sp13_S_contig6025:2793..3485Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6025 2794..3485 -
1681463839.083138-UTR-Ecto-sp13_S_contig6025:3570..39441681463839.083138-UTR-Ecto-sp13_S_contig6025:3570..3944Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6025 3571..3944 -
1681463839.1532893-UTR-Ecto-sp13_S_contig6025:6654..67011681463839.1532893-UTR-Ecto-sp13_S_contig6025:6654..6701Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6025 6655..6701 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463839.0919101-CDS-Ecto-sp13_S_contig6025:3944..43941681463839.0919101-CDS-Ecto-sp13_S_contig6025:3944..4394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6025 3945..4394 -
1681463839.101913-CDS-Ecto-sp13_S_contig6025:4808..48981681463839.101913-CDS-Ecto-sp13_S_contig6025:4808..4898Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6025 4809..4898 -
1681463839.123701-CDS-Ecto-sp13_S_contig6025:5716..59141681463839.123701-CDS-Ecto-sp13_S_contig6025:5716..5914Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6025 5717..5914 -
1681463839.1391954-CDS-Ecto-sp13_S_contig6025:6435..66541681463839.1391954-CDS-Ecto-sp13_S_contig6025:6435..6654Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6025 6436..6654 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6025.16643.1

>prot_Ecto-sp13_S_contig6025.16643.1 ID=prot_Ecto-sp13_S_contig6025.16643.1|Name=mRNA_Ecto-sp13_S_contig6025.16643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp
MAGEVIKLVFSTVMTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFF
VMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALV
LLVLGVTLVSNGSYVSAGKEDKKGVGWQYVIGVAAVLAEVSLSGFVSVFF
EKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPLFQGWTVNAGIL
SVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPI
GVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAAKGSRGGDADGDD
EAGLSLLTRTGAPSESAA*
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mRNA from alignment at Ecto-sp13_S_contig6025:2794..6701-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6025.16643.1 ID=mRNA_Ecto-sp13_S_contig6025.16643.1|Name=mRNA_Ecto-sp13_S_contig6025.16643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3908bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6025:2794..6701- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAGCGTGGGCGTTCTCAATGAAACGTGGTCCTCTAGCTCGGTGCTCATG GCGGGAGAGGTGATCAAGCTAGTCTTCTCGACCGTGATGACGCTGGCGGA CTCTGGTAGCACCTCCGCGGAAGGTACCGGCGTCAGAAAGCTCGCTTGGT TGGTGCGGGCCTCGCCCCCGATGTGCATACCCGCGGTGGTCTTCTTCGTG ATGAACTTGCTGAGCTACGTGTCACTGAAGCGGGTCGACGCTAGCACCTT CACGGTTTGCGCTCAGGTACGCGGGGTGTGTGTACAATATGTGGTGGTGG AAGTGGTGATTGTTGGGCGTGAGAGGCGGCGGTAGCGAGCACCGTGAAGT GTGTGCATACTGTAATATTGCACACTTGTGGAGACTTGTTGGACGGGCAG GGACAGGGGTCCCCGCAGCCGTTGTTTTGTGTGTCGCCGCCATCGAGGAC GCGAGAGTGCGCTGTTTGCCGCGATGGAGGGATACTGCTGTTTCAATTAC GGTGGATTGTGCCGCTGCATCGGCACTGCCGCTATTCAGCGTGCCGCTTG TACACCCACGCGGTATTTGTGGCAACCGGACGGACGGGGACGTATGTTTT CGGAAGCGTCGTTTTGCTTTCGCTGTGTTGAATGTGATTCCTGTGTCCTT GACCTGCTCCAAGCATCCTTCGCTGCATCGCGAGTCAACCAAACTACATG TGACTTGTTGATACATTTGTGTCACATTGGGAATACCACACCCCGCTGTC GTGCCCTAAACTCCCCCCACCCCCGGGGTCGCCGCAGATGAAAATCCTGA CTACCGCCATCTTCTCGGTCGTCCTGATGGGTCGCAGCTTCCACGCCCGC AAGTGGCGAGCCCTTGTCCTTCTGGTGCTGGGCGTCACCCTAGTGTCGAA CGGGTCTTACGTGTCGGCCGGAAAGGAGGATAAGAAGGGCGTCGGGTGGC AGTACGTGATCGGCGTGGCGGCGGTTCTCGCGGAGGTGAGGGAGAACTTT TGTTTGTGTCGCATTTTTTTTTTGATTGGTTGGTGATTGATGCCCCCATA TCGCGCGGAGTTGCGAGATAGCTTTCCTTCCTTTTTGCGGCGTTTTTTTT TTTTTTATTGGTTGGTTTTGATGCCCTCTGTGTGGAGGTGCGGGATGACT TACTTCGAGTGACGTTTCGGCTCTGGCCCCGATGCCCTGATGCGGTGCAA CGTTCAAGGTTTCGTCGTTTGTTTTGTTTGCCCGTGAGAGAAATGCGTGC GTCAAGCGTCAGGTGTGTCCGTGGGTAGTTGCATTCTTTGTGTGCAGCGT TAGCACATACTGTTACGAGCGCGCTCTCCTCGCTTTTTGCCTTGTCTCCT TAACGCTGTATCAGGCGACTCATCATCCCGCTCGCCGACACGGGACACTC AACTCACAAATTTGCTTCAACGTGTCCTTACAACAGTAATGAGGAAGTGT TCTTGAAGTCGTGTCTGCTACGCCGCTGTTGTTTTTATGATATGCGGGGC GCCGTGCTTCTTGTTGAAGATATGGTGCCCCAATAGGAGGAAGGAGATGT GTCCTTAATCACCAATTTATGGCTGTTTTTCTCGCGGTGGAGGTCGTAGG ATAGCGCTCGTCTTTTCTCCTCCGTGTTCTCACTTTTGGTGCTGCTCGCT GTCCTTCGTGACCCTATTTTCTATCTCTTTTGAGATTTTCTCACCATATC GCCAGTTGTTTCGCTCTTGTGCTCCTCCTTTACCTCTCAGCTCTTTTTCT GCGTCTTCTGTTTCCGTTCCTCATGCATGCAATGCATTGCGATGCGATGG TAGGTTTCTCTGTCCGGATTCGTAAGCGTGTTCTTTGAAAAGGTGCTCAA GAGCAGGGTGGTGAACCTGTCGGTATGGGACCGCAACTTCCAGGTGAGCC GCATCGCAAGGAAAAGCGCCAGCTTTTTGATTTCACCGTAGACAACCACA CAGCAGTAGCAGTAGCACCATCGGTGCCTTTTCGGCCGCGCTTTCTCGGC AACTAGATCGGAGGCCACCTTTCTTTTTGGACCCTCGGCTTTGCGTACGA TTGCGGAGTGCGCACTCTGCGTGCGTGAGAGTCGTAGGCAAAACACCCGC CCCCCGCCCCCTTGTGATATCGTTAGGATAGATGGACTAGGGAAGACATT TCTGAGCCACCTTTGGCAAAGTAGGAAGGAACGATTGACCACCGGTGATC GGTCCTGTGGGAACAATGCCTCTCGAGGACGCGTGGTCAATGGTCTAACC GCTAAGGCATGCAAAACATAAGAGCACGCCCCCCCCCCTTTTGTTCCATT CGTGCAGCTGGCGATGTACTCGATCGTGTTCTACCTCCCGATGGCGCTGT GGGAGGAAGGGCCGCTGTTCCAGGGGTGGACCGTCAACGCTGGCATCCTC TCCGTCCTCGGCAGCGCCGGCGGCATCCTCGTGGCCCTCACCATGAAGTA CACGGACGCCGTGCTCAAGACGTTCGCCACCTCTGGGGCGATCATCGTAA CCGCCGTGGGGGGACACTTCACCCTGGGGTCTCCGCTGGACATCCCGATC GGAGTCGGGGCCGGCTGCACCGTGCTGTCGCTGCTTAACTACAGCGACGA CGGAGCCCCGGTGGCCGCCCCCGATACCGGCAGTGGTGGAGGAAGCAACG GGACTGTGGCGGCGAAGGGGTCGCGGGGGGGTGACGCGGATGGTGATGAT GAGGCCGGGCTGTCGCTCTTGACCCGGACGGGGGCCCCGAGTGAGTCCGC TGCCTAAAGGCGGGGTTGTTGGTGAGGAGTGCGGTATATGATGACGGTTT GCCAGTAATGTTTTGCGTGTGTGTGGTGTGGGTCAATCCTGTCGTTGTGG GAGAGCGAGGCCGCTCGCTCACCCCCCACGCCCGCCTCGAAGTACAACAC AACAGTCGTCGTTCTGTTTGGTTCGACTTTGGTCGGAGCAGCTATTGCAC CTTGGTGTATTGCGATTGTGTATTGCGATTCCAAGATGTGTTGGGGTGAG GCCACCGGAGCCGTTCGCACCAAGTGTCACAGGGTGTGATGATTAGACTG CTCTGATTTCGAGCTTGTAATTCTTCTTCGCTCTTCCGGGATACCGAACA TGCCAAAGGCGGCGGCGGCGGCGGCGGCGGCGTCTTCCAGAGCAGATGAC CGCAGGCGGTGGTTCGTTGTTGAACCGCGACTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCGTGTGGGGTTGTGTCGGTCGAGCGTAT CTAGCCTTCATGTGTGGGAGTCTGTTCCTGCCACGAATTGGAGGTCTCGC AAGCCGTTGAGGAATTCTGGACGGGCCACTAAATATTATCGTGGTCAAGA GCGTAGGGAACCCACGGACTGGGTGTGTGTCTGCTCACCGAAATGGAGCG ATACACATGGCGTGCTTTAATGTCCACGACCCTGTTTCATGGTCGTTTCG CTGGAGGGGATAATAGGGGTGGTGGTGATGGGTGTGCGTGCGGAAGGCGA GCAACCCGTTGGCGTCTGTCTATGTATGTTTTTTCCTTCGTGGTAACCGT TGTTCTTGTATTTCTTCCAGTACTTTTTTTTTTGTCAAATTGGTTTGTAG TTTTGCTTATTATTTAGTTTGGAATATTCTTCTTTGTTTTGCAAAAGCTG GCACAGCAGGAACGATTAGCTCTACTTTACTTGTCCTGATGCTGCGGAAG GGGAGGCCTCTTGAAGTCAATCTATTCGCAGGTCGTTCGGTTTGTTGAAG CACCTTTGCTCTCGCAGAGCAAAGGTTATTCTGAGTTGTATTCAAGTATC GCCCCCCTGTTCGACCGTTGTTGTCATGCAATTGGCAAGAGAAACGACTT TTCTTGGTTCGCTAGGGAACTGAACCAACCGAAACCAAGCGCCAATAAAA CAAGAAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6025:2794..6701-

>mRNA_Ecto-sp13_S_contig6025.16643.1 ID=mRNA_Ecto-sp13_S_contig6025.16643.1|Name=mRNA_Ecto-sp13_S_contig6025.16643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=957bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6025:2794..6701- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGGAGAGGTGATCAAGCTAGTCTTCTCGACCGTGATGACGCTGGC
GGACTCTGGTAGCACCTCCGCGGAAGGTACCGGCGTCAGAAAGCTCGCTT
GGTTGGTGCGGGCCTCGCCCCCGATGTGCATACCCGCGGTGGTCTTCTTC
GTGATGAACTTGCTGAGCTACGTGTCACTGAAGCGGGTCGACGCTAGCAC
CTTCACGGTTTGCGCTCAGATGAAAATCCTGACTACCGCCATCTTCTCGG
TCGTCCTGATGGGTCGCAGCTTCCACGCCCGCAAGTGGCGAGCCCTTGTC
CTTCTGGTGCTGGGCGTCACCCTAGTGTCGAACGGGTCTTACGTGTCGGC
CGGAAAGGAGGATAAGAAGGGCGTCGGGTGGCAGTACGTGATCGGCGTGG
CGGCGGTTCTCGCGGAGGTTTCTCTGTCCGGATTCGTAAGCGTGTTCTTT
GAAAAGGTGCTCAAGAGCAGGGTGGTGAACCTGTCGGTATGGGACCGCAA
CTTCCAGCTGGCGATGTACTCGATCGTGTTCTACCTCCCGATGGCGCTGT
GGGAGGAAGGGCCGCTGTTCCAGGGGTGGACCGTCAACGCTGGCATCCTC
TCCGTCCTCGGCAGCGCCGGCGGCATCCTCGTGGCCCTCACCATGAAGTA
CACGGACGCCGTGCTCAAGACGTTCGCCACCTCTGGGGCGATCATCGTAA
CCGCCGTGGGGGGACACTTCACCCTGGGGTCTCCGCTGGACATCCCGATC
GGAGTCGGGGCCGGCTGCACCGTGCTGTCGCTGCTTAACTACAGCGACGA
CGGAGCCCCGGTGGCCGCCCCCGATACCGGCAGTGGTGGAGGAAGCAACG
GGACTGTGGCGGCGAAGGGGTCGCGGGGGGGTGACGCGGATGGTGATGAT
GAGGCCGGGCTGTCGCTCTTGACCCGGACGGGGGCCCCGAGTGAGTCCGC
TGCCTAA
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