mRNA_Ecto-sp13_S_contig6014.16630.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: D7G851_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G851_ECTSI) HSP 1 Score: 787 bits (2032), Expect = 1.100e-285 Identity = 410/421 (97.39%), Postives = 414/421 (98.34%), Query Frame = 3
Query: 45 MRNAYPRARSALPPDQGRVADNRSSSSRACAPAQMAFGSSSSGATCVKSAPYAYNPLEHSTSLGWQQSLMGAIDIDLGAEPAAADTGGSSHGGRAVHNNLDGGSMPQQSKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLPARNGNGEGGAGDFSGFV 1307
M NAYPRARSALPPDQG VADNRSSSS ACAPA MAFGSSSSGATCVKSAPYAYNPLEHSTSLGWQQSLMGA D+DLGAEP+AAD GGSSHGGRAVHNNLDGGSMPQQSKTYRMAVKRTVMS+ALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLE+QGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLPARNGN EGGAGDFSGFV
Sbjct: 1 MSNAYPRARSALPPDQGMVADNRSSSSSACAPAHMAFGSSSSGATCVKSAPYAYNPLEHSTSLGWQQSLMGATDVDLGAEPSAADIGGSSHGGRAVHNNLDGGSMPQQSKTYRMAVKRTVMSIALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLPARNGNEEGGAGDFSGFV 421
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A6H5LI88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI88_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 5.430e-168 Identity = 261/292 (89.38%), Postives = 264/292 (90.41%), Query Frame = 3
Query: 510 SVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQ--------------------------DPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLPARNGNGEGGAGDFSGFV 1307
SVDNLFVFLMTFDYFQVPLE+QGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMS+RLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQ DPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGD PPLPARNG+GEG AGDFSGFV
Sbjct: 51 SVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSRRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARHIDLLPANFSWQMWLRMSHNTPSRDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDAPPLPARNGDGEGVAGDFSGFV 342
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA) HSP 1 Score: 333 bits (854), Expect = 2.570e-108 Identity = 175/277 (63.18%), Postives = 225/277 (81.23%), Query Frame = 3
Query: 369 SKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCR 1199
++ +R +V TV VAL+ FG FRGRQSG EFFAGYLVEQSLSVDNLFVFLM F+YFQVPL YQGRVLTWGI+GA++MRG+MI GVAAV++F+ + ++FAAIL++S+ KL ES+E + DLS NT++R+SK VGAV+EYDGD+FFT L G+ + ATPLLLCLVCIELSDFVFAVDSIPAV+G+SQD +V++SN+FAIMGLRS+Y ++A+AV LPYL+PAVALVL F+G KM++E+ H IS SL VV++L+ G+ LSL+ ++ R
Sbjct: 10 AERFRQSVLSTVGCVALAVVFGAGVWHFRGRQSGFEFFAGYLVEQSLSVDNLFVFLMLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFESDEPE-DLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRR--ATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKKPR 283
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A7R9UD78_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD78_9STRA) HSP 1 Score: 327 bits (839), Expect = 2.350e-105 Identity = 173/269 (64.31%), Postives = 220/269 (81.78%), Query Frame = 3
Query: 387 AVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAV-DEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLAR 1190
A+ R +SVA++C FG+ T+ +GR++GL +FA YLVEQSLSVDNLFVFLM F YF+VPL +QGRVLTWGIVGA+LMRG MIA GVAAV+ F+W+ +VFAA+L+ SS K+L EEE DLS N +++MSK+L+G V D YDG++FFT GG VATPLLLCLVCIE+SDFVFAVDSIPAVLG+S DPF+V+TSN+FAI+ LRS+Y ++A+AV+ LPYLK AVALVL F+G KM+LE+ ++I G SL VVL L++GGV LS++AR
Sbjct: 87 ALYRVCLSVAMACLFGVFTVFLKGREAGLAYFAAYLVEQSLSVDNLFVFLMLFAYFKVPLLHQGRVLTWGIVGAVLMRGFMIAVGVAAVQHFRWMILVFAAVLVFSSVKML-SGEEEQEDLSDNYIIKMSKKLLGTVTDRYDGEKFFTEQGG--AKVATPLLLCLVCIEISDFVFAVDSIPAVLGVSHDPFIVYTSNIFAIIALRSLYTLVARAVNDLPYLKHAVALVLFFIGVKMVLEFFGVDIGIGTSLTVVLLLLVGGVVLSMIAR 352
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA) HSP 1 Score: 321 bits (823), Expect = 2.160e-104 Identity = 171/267 (64.04%), Postives = 209/267 (78.28%), Query Frame = 3
Query: 429 FGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLL--ARRCRRAPVVRHK 1223
FGL TM +GRQSGLEFFAGYLVEQSLSVDNLFVF+M F+YF+VP YQGRVLTWGI+GA+ MR VMI GVAA++RF+ + + FAAILL SS KLL E E+ED DLS N ++R+SK V + D+Y+G++FFT + G K +ATPLLLCLVCIELSDFVFAVDSIPAVLG+S+D F+V++SN+FAI+ LRS+Y +++ A++ LPYLKP+VALVLGFVG KM EY H I G SL VV L+ GGVG S+ RR R RHK
Sbjct: 8 FGLGTMAVKGRQSGLEFFAGYLVEQSLSVDNLFVFIMLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGDLSNNIVLRISKFFVRSTDKYEGEKFFTVVDG--KKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRRARLGLSGRHK 272
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA) HSP 1 Score: 322 bits (825), Expect = 4.410e-103 Identity = 180/356 (50.56%), Postives = 241/356 (67.70%), Query Frame = 3
Query: 147 MAFGSSSSGATCVKSAPYAYNPLEHSTSLGWQQSLMGAIDIDLGAEPAA-ADTG----GSSHGGRAVHNNLDGGSMPQQSKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEE--DHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARR 1193
+A GSSS+ T + P + S L S G + + + A A T G S G+AV + + Y AV+RT+++V + FG GRQ +EFFAGYL+E+SLSVDN+FVF+M F+YF+VP+EYQ R L+WGI+GA+ MRG+MI GVAA++RF+W+ ++FA +LL S++KLL E E + DLS N LV +K+LV AVDEYDGD FFTR G K ATPL +CL+CIELSDFVFAVDSIPAVLG+S+DP +V++SN+FAIM LRS+Y ++A AV+ L Y+KP+VALVL FVG KM+ E+ H+ + SL VV+SL+ GG+GLSLL +R
Sbjct: 23 LAVGSSSTCPTPGDKTQISRAPRQGSAHLPQWVSSRGGLTLPFRQQQIAHAKTATVVKGPSSKGKAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNG--KRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQR 376
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A7S2E636_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E636_9STRA) HSP 1 Score: 320 bits (820), Expect = 4.590e-103 Identity = 172/273 (63.00%), Postives = 214/273 (78.39%), Query Frame = 3
Query: 363 QQSKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSL 1181
Q+++ +R +V TV+ VA + FG + +GR+SG EFFAGYLVEQSLSVDNLFVFLM F+YFQVPLE QGRVLTWGI+GA+LMRGVMI GVAA++RF+ + ++FAAILLVS+ KL ES+E DLSQN +++ SK GAVDEYDG++F T + + + ATPLLLCLVCIELSDFVFAVDSIPAV+G+SQD VV++SNLFAIMGLRS+Y ++A+AV L YL+PAVALVL F+ KMLLE+ H I SL VV L+ GG+ LSL
Sbjct: 10 QEARRFRSSVIYTVLIVAAAAAFGSGIWVVKGRRSGFEFFAGYLVEQSLSVDNLFVFLMVFNYFQVPLECQGRVLTWGIIGAVLMRGVMITIGVAAIQRFRSVILIFAAILLVSAVKLFFESDEPQ-DLSQNVVMKFSKFCTGAVDEYDGEKFITVVNNRRR--ATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDALVVYSSNLFAIMGLRSLYTLVAKAVEDLAYLRPAVALVLCFISIKMLLEFFHYEIPIHLSLLVVALLLAGGIVLSL 279
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.850e-102 Identity = 165/285 (57.89%), Postives = 226/285 (79.30%), Query Frame = 3
Query: 360 PQQ-SKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPV 1211
PQ+ S+ Y+MAV +T ++VA + FG T + +G+++G+EF+AGYLVEQSLSVDNLFVFLM FDYF+VPL YQ R LTWGI+GA+ MR VMI GVAA+++F+ + ++FA ILL SS+KL E EE D DLS N ++++S ++ +VD YDG++FFT++ G ATPLL+CLVCIELSDFVFAVDSIPAV+G+++DPF+V++SN+FAIM LRS+YV++AQAV+ LPYL+PAVALVL FVG KM+ E+ H +ST SL VV +++ GG+ LS++ + + A V
Sbjct: 76 PQKGSRAYKMAVLKTCIAVASAAVFGAGTWVVKGQKAGMEFYAGYLVEQSLSVDNLFVFLMLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFE-EEGDEDLSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRH--ATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAKAAAV 357
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK) HSP 1 Score: 320 bits (819), Expect = 4.690e-102 Identity = 165/296 (55.74%), Postives = 227/296 (76.69%), Query Frame = 3
Query: 369 SKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLP 1256
SK Y+ AV +TV+ V + FG T +GRQ+ LEFFAGYLVEQSLSVDNLFVF+M FDYF+VP+++Q RVLTWGI+GA+ MR VMI GVAA+++F+ +T++FA IL+ S YK++ ESEEE+ DL N ++++S ++V + +YDG++FFT++ G ATPLL+CL+CIELSDFVFAVDSIPAV+G+++DPF+V++SNLFAI LRS+Y ++A+AV LPYLKPAVALVLGFVGCKM EY H + G SL VV L+ GG+ S++A+ +A H+++++ P+P
Sbjct: 94 SKEYKAAVIKTVLVVLAAIAFGAGTWAVKGRQASLEFFAGYLVEQSLSVDNLFVFIMLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESEEEE-DLEDNVIMKLSNKMVKSTTQYDGEKFFTKIDG--VKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKN--KAAEKEHQQQEALVAQPIP 384
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Match: A0A7S1UHU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHU3_9STRA) HSP 1 Score: 316 bits (809), Expect = 1.600e-101 Identity = 169/302 (55.96%), Postives = 227/302 (75.17%), Query Frame = 3
Query: 288 AAADTGGSSHGGRAVHNNLDGGSMPQQSKTYRMAVKRTVMSVALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEYQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVES---EEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLL 1184
A DT HGG A + L G + Y+ A+++T+++VA + FGL T F+G+ S LEF+ GY+VEQSLSVDNLFVF++ FDYF+VP +Q RVL WGI+GAI MRGVMI GVAA++RF+ + ++FA +LLV++ +L+ ES EEE+ DLS N ++ +S+++V AVD YD ++FFT G + ATPLLLCLVCIELSDFVFAVDSIPAVLG+S+DPF+V+TSN+FAI LRS+YV++A+A+ +PYLKPAV LVLGFVGCKML EY H +ST SL V++ ++ G + LSL+
Sbjct: 5 AVLDTAFPGHGGEA--SVLPAGEDGKHE--YQRALRKTILTVASAMLFGLGTWHFKGKTSALEFYTGYIVEQSLSVDNLFVFILLFDYFKVPAAFQSRVLNWGIIGAIAMRGVMIVLGVAAIQRFRVVMLLFAGLLLVAAGRLVKESFAVEEEEEDLSSNWIMNVSRKMVNAVDYYDDEKFFTMSNGIQR--ATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDPFIVYTSNIFAIAALRSLYVLVAKAIDDMPYLKPAVGLVLGFVGCKMLGEYYHYEVSTAVSLAVIMGILGGSIVLSLI 300 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6014.16630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6014.16630.1 >prot_Ecto-sp13_S_contig6014.16630.1 ID=prot_Ecto-sp13_S_contig6014.16630.1|Name=mRNA_Ecto-sp13_S_contig6014.16630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp MRNAYPRARSALPPDQGRVADNRSSSSRACAPAQMAFGSSSSGATCVKSAback to top mRNA from alignment at Ecto-sp13_S_contig6014:4819..8464- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6014.16630.1 ID=mRNA_Ecto-sp13_S_contig6014.16630.1|Name=mRNA_Ecto-sp13_S_contig6014.16630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3646bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6014:4819..8464- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6014:4819..8464- >mRNA_Ecto-sp13_S_contig6014.16630.1 ID=mRNA_Ecto-sp13_S_contig6014.16630.1|Name=mRNA_Ecto-sp13_S_contig6014.16630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6014:4819..8464- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |