mRNA_Ecto-sp13_S_contig6009.16617.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6009.16617.1
Unique NamemRNA_Ecto-sp13_S_contig6009.16617.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: D8LBU6_ECTSI (Similarity to cobalamin synthesis protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU6_ECTSI)

HSP 1 Score: 631 bits (1628), Expect = 2.080e-221
Identity = 430/506 (84.98%), Postives = 436/506 (86.17%), Query Frame = 1
Query:    1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPA-AVAAAKLDGIILECSGLDELAPVLQGNAKAKSSTQVEGSGEEGATDSSAAAAA----TLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLGSVKFGGGENDLFL 1503
            LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSAS RASLGDGD            XXXXXXXXXXXXXXXXXXXXXXXX                VEAAPA AVA A+LDGIILECSGLDELAPVLQGN  AKSST VE   E                TLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGA+VTRCERGKVDVDLVLGV+SFSLDKALEMDKHFADILADK          XXXXXXXXXXXXXXXXXXXXXXXXXXX SP  +HRHAHDRLGAQSVGVEVAEGPIDW KFTSWLKGFLEKEGEELIWRLKGVLWTTAA+GSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDL PRVQEALRAGVRSCVA RRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLG+VKFGGG NDLFL
Sbjct:   74 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASERASLGDGDAPQQTQQEADKSXXXXXXXXXXXXXXXXXXXXXXXXEAAVARDTATAGG---VEAAPAPAVAGAQLDGIILECSGLDELAPVLQGNGDAKSSTPVEEGAEXXXXXXXXXXXXXXXXTLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGAAVTRCERGKVDVDLVLGVESFSLDKALEMDKHFADILADKKKNSDKHDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGRDHRHAHDRLGAQSVGVEVAEGPIDWTKFTSWLKGFLEKEGEELIWRLKGVLWTTAANGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLSPRVQEALRAGVRSCVAVRRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLGAVKFGGGGNDLFL 576          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A835ZKA2_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKA2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.720e-50
Identity = 200/486 (41.15%), Postives = 248/486 (51.03%), Query Frame = 1
Query:    4 PVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQVEG--------------------SGEEGATDSSAAAAAT--LVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHF--ADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRARPP 1380
            PVTVI GFLG+GKTT +NH+L A HG +LAV+ENE G VA+DD LL D          +V+LMPNGC+CCR RGDL DAL+RL+              XXXXXXXXXXXX                                                   LDGII+E SG  E+APVLQ    +   + + Q++                      G+E + +  AAAAA   +   QLAL+D VLLNK+DL+ P    AL  ++ A+   A+VT C RG VDV  +L   +FSL +A+  D  F       + NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +G ++ G E + G +D A+   W  G         +WR+KGVLW   A G GA         RR V+QG+ GH E E  DWP G  R SR+V IG L   ++  LR  +        A PP
Sbjct:   44 PVTVICGFLGSGKTTLLNHVLRAPHGLRLAVLENEVGAVAVDDELLSDA--REAALGPEVVLMPNGCLCCRTRGDLRDALRRLVERQQXXXXXXXXXXXXXXXXXXXXXXL--------------------------------------------------LDGIIMELSGASEVAPVLQTFFADDFVQGALQLDSVVCVCDAPRLAQQLLPPQQQRGDELSAEVGAAAAAAHAITAEQLALADTVLLNKADLVDPDTLAALRASLSASMAAAAVTECVRGAVDVRRLLNTGAFSLSRAVAADDAFLAGGSYGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGLRTAGAEHSRGAVDTARVVDWAHGVXXXXXAARVWRIKGVLWGDGAGGRGALA-------RRVVLQGVGGHVEVEEGDWPPGRPRRSRIVLIGPLSDELEAELREALARVFEPVAAAPP 470          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A5C1A4S2_9BACT (GTP-binding protein n=2 Tax=Limnoglobus roseus TaxID=2598579 RepID=A0A5C1A4S2_9BACT)

HSP 1 Score: 144 bits (363), Expect = 4.500e-35
Identity = 150/460 (32.61%), Postives = 218/460 (47.39%), Query Frame = 1
Query:    4 PVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQVEGSGEEGATDSSAAAA----ATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVS-DWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVA 1359
            PVTV+TGFLGAGKTT +NH+L+A HG+K+AVIENEFGE+ +D  L+    +   EE   +  M NGC+CC VRGDL+  L  L+                                                                            K D I++E +GL + APV Q    + + +++T+++G       D+  AA     +  V  Q+A +D +LLNK+DL +PA+ D L   ++     A V R  RG V++D +L V  F+LD+ LE +  F  +  +K+ XXXXXXXX         XXXXXXXXXX             EHRH  +     SVG+ VAEG +   KF  W+   L+  G +L +R+KG+L                G  +R V QG++   ++E +  W  G  RV+++VFIG    R  + L +G ++C+A
Sbjct:   18 PVTVLTGFLGAGKTTLLNHILTANHGKKIAVIENEFGEIGVDQDLV----ISSDEE---IFEMNNGCICCTVRGDLIRILGTLMKRRD------------------------------------------------------------------------KFDAILIETTGLADPAPVAQTFFADDEVRANTRLDGIVT--VVDAKHAAQQIGRSKEVTEQIAFADVILLNKTDLATPAELDELERRIRRMNAVAKVYRTNRGVVEMDKILNVGGFNLDRVLEFEPDF--LKEEKHEXXXXXXXXGEHCGENCGXXXXXXXXXX-------------EHRHDEE---VSSVGI-VAEGSVQIKKFNEWISTLLQTRGPDL-YRMKGILSIK-------------GDAKRHVFQGVHMQLDAEPNRPWADGEPRVNKLVFIGKNLNR--DELTSGFKACLA 361          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A812YTS9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YTS9_9DINO)

HSP 1 Score: 144 bits (363), Expect = 1.410e-34
Identity = 111/308 (36.04%), Postives = 149/308 (48.38%), Query Frame = 1
Query:    1 LPVTVITGFLGAGKTTFVNHLL-SARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPV---------LQGNAK---------AKSSTQVEGS-GEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILAD 864
            +  T++TGFLGAGKTTF+N +L S  HGR++AV++NEFG+V IDD L+    +E+   A + I+MPNGC+CCRVRGDLVDAL+RL  +    A+   G                                                                KLD +++ECSGL E+ PV         +Q + K         A S  Q+EG    EGA     A  A L++ QLA+SD  LLNK DL+  AQ D +   ++   P   V  C  GKV++  VL V+SFSLD A+ +D HF    AD
Sbjct:   35 IRATILTGFLGAGKTTFLNFVLKSLGHGRRIAVVQNEFGKVPIDDQLML---LEK--SAAETIVMPNGCLCCRVRGDLVDALRRLADAPETLAAEASGGQ--------------------------------------------------------------KLDSLLIECSGLSEVLPVAQTFFSDPFVQASFKLDSVVCVCDAASFDQLEGGVASEGAAG---ADVAQLLREQLAISDVCLLNKCDLVDSAQRDQVSSRIREVNPAVRVVPCRHGKVNLAQVLQVNSFSLDGAISLDAHFLTSDAD 272          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A7S4S2X6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2X6_9DINO)

HSP 1 Score: 140 bits (354), Expect = 2.720e-34
Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1
Query:   10 TVITGFLGAGKTTFVNHLL-SARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQV---------------EGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFAD 852
            T++TGFLGAGKTTF+N +L S  HG+K+ V++NEFG V++DD L+    VE+ E   +V++MPNGC+CCRVRGDLV+AL+RL     A+  L   D                                                         A  A   LDG+++ECSGL E+ PV Q    +   ++S Q+               EG+G++  T  +    + L++ QLA+SD  LLNK DL+   Q D +   V+A  P   V  C  GKV++  VL ++SFSL+ AL +D HF +
Sbjct:   60 TILTGFLGAGKTTFLNFVLKSLGHGQKIGVVQNEFGIVSVDDQLML---VEKSEA--EVVVMPNGCLCCRVRGDLVEALRRL-----AQRRLPGADA--------------------------------------------------------AGAAEVPLDGLLIECSGLSEVLPVAQTFFADPYVQASYQLDGVLCVCDAGNFEALEGNGKDVGT--AGPEVSRLLREQLAISDVCLLNKCDLVDSTQRDKIGTRVRAVNPAIKVVPCRHGKVNLGQVLKINSFSLESALSLDAHFLE 291          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A1Y5HX51_OSTTA (PRLI-interacting factor L-like protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A0A1Y5HX51_OSTTA)

HSP 1 Score: 142 bits (358), Expect = 3.670e-34
Identity = 139/475 (29.26%), Postives = 192/475 (40.42%), Query Frame = 1
Query:    4 PVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPV------------------LQGNAKAKS-STQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYG--HFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASR 1365
            PVT++TGFLGAGKTT VNH+L   HG K+AVIENEFG V+IDDAL+     E  +E + VI M NGC+CC VRGDLV AL  L                                                                             K D +I+E +GL + APV                  +   A AK  +  +E    +GA + +          Q+A +DR+LLNK DL+S  + + L   +++    A V R +   VD+++VLGV+SFSL+K LE D  F D                                                  + HD  G  SVG+ V EG +D+     ++   L++    + +R KGVL      G G A         + V QG++   +F    S W     R++RMVFIG    R   AL AG R+C+A +
Sbjct:   57 PVTIVTGFLGAGKTTLVNHILRGDHGLKIAVIENEFGAVSIDDALVS----ENIKEKEDVISMDNGCVCCTVRGDLVRALLTLRDRGK------------------------------------------------------------------------KFDAVIIETTGLADPAPVAFTFFINPEIAEHYRIDSILCLADAKHVALHMEEEKPDGAVNEAV--------QQVAFADRILLNKIDLVSEEELETLEKTLRSVNASAEVLRTQNSVVDLNVVLGVNSFSLEKTLETDPSFMDE----------------------------------------------NKENKHDLTGVSSVGIAV-EGELDFQAVNEFMMNLLQENALNM-YRSKGVL---CFEGQGDA---------KFVFQGVHEQINFGPAASTWAENEPRINRMVFIGRNLDR--PALEAGFRACLAKK 385          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A7S1ELX2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELX2_HEMAN)

HSP 1 Score: 140 bits (353), Expect = 6.320e-34
Identity = 132/464 (28.45%), Postives = 193/464 (41.59%), Query Frame = 1
Query:    1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLI-----VSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSG------LDELAPVLQGNAKAKSSTQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESE-VSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCV 1356
            +PVTV+TGFLGAGKTT +N++L++ HG K+AVIENEFGEV IDDAL+     ++ E ++++  M NGC+CC VRGDL+  L +++     + A    + G  DP                                                           A A+LD I+           LDE+ P                   EGA +            Q+  +DR+LLNK+DL+SP   + +   +++      V RCER  V +D VLGV +F L + ++MD  F   LA++                                           H H HD     SVG++  +G +D AK   W+   L+ +G + I+R KGVL                G   + V QG++  F  E  ++W  G  RV+RMVFIG    R +  L  G  +C+
Sbjct:    7 IPVTVLTGFLGAGKTTLLNYILTSNHGLKVAVIENEFGEVGIDDALVK----QQYETSEEIFEMNNGCICCTVRGDLIRILNKILKRKTRLDAVLIETTGMADPAPVAQTFFMDEGIQ---------------------------------------------ARARLDAIVTLVDAKHVIQHLDEVKP-------------------EGAENECV--------EQVVFADRILLNKTDLVSPEHLEEVEKRLRSINRTGEVIRCERAVVPLDKVLGVRAFDLQRVVDMDPGF---LAEEG------------------------------------------HEHTHDSS-ITSVGIQK-DGMLDLAKLNKWMSTLLKDKGVD-IYRSKGVLSIQ-------------GMKEKFVFQGVHMTFNGEPTTEWKEGEARVNRMVFIGKNLDRKE--LTEGFDACL 331          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A3R7J9R0_9STRA (CobW C-terminal domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9R0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 8.120e-34
Identity = 148/477 (31.03%), Postives = 207/477 (43.40%), Query Frame = 1
Query:    1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEA-----------QQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFA----DILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSD-WPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRAR 1374
            LPVT++TGFLG+GKTT +NHLL+  HG++ A+IENEFGEV +DD L+   G + G              ++V+ M NGC+CC VRGDLV    RLI     R                                                                  V    LDGII+E +G+ + APV+Q         ++ +++G+G E              + Q+A +DRVLLNK+DL++ A+   +   ++      S+T C+  +VD  L+L V +F +D  L+    F     D L+++N              XXXXXXXXXXXXX                RH  D L   SVG+   + PI       W+   LE EGE+L+ R KGV+                G  R+ V QG++  F    +D W  G TR +R VFIG    R   AL  G   C A++  R
Sbjct:   11 LPVTILTGFLGSGKTTLLNHLLTENHGKRFAIIENEFGEVGVDDQLIRQAGSKSGTAGGDARSRKFNMGEEVLTMNNGCICCSVRGDLV----RLIAEILKRN-----------------------------------------------------------------VDRYHLDGIIIETTGMADPAPVVQTFFAEPMVAATCELDGAGVEHEC-----------QEQIAFADRVLLNKTDLVTSAELKEVHSRIRDINGAVSITECQHCRVDPSLLLNVQTFDIDSILKSRPDFLKTEKDNLSNENSHDHDHDDKKDSGHXXXXXXXXXXXXX----------------RHGSDSL-VSSVGLSTYD-PILVTLLEEWIDDLLETEGEDLL-RYKGVVNVA-------------GIDRKYVFQGVHTLFNGRFADHWAPGETRETRFVFIGKNLDRT--ALTDGFLDCRATKHLR 373          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: H3H4U4_PHYRM (CobW C-terminal domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=H3H4U4_PHYRM)

HSP 1 Score: 142 bits (359), Expect = 1.010e-33
Identity = 158/481 (32.85%), Postives = 210/481 (43.66%), Query Frame = 1
Query:    1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALL-----------GDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASL--------GDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSG---LDELAPVLQGNAKAKSSTQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSD-WPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRAR 1374
            LPVT++TGFLG+GKTT +NHLL+  HG+K A+IENEFGEV +DD L+           GD    +    ++V+ M NGC+CC VRGDLV  + +++     R  L        G  DP                                                     A P   A  +LDGII        L  L P               G+G E              + Q+A +DRVLLNK+DL+S  +   +   ++      S+T C   +VD  L+L V +F LD  L+    F     D +  XXXXXXXXXXXXXXXXXXXXX              +  G HRH H  +   SVG+ + E PI  A    W+   LE EG++L+ R KGV+                G  R+ V QG++  F    +D W  G TR +R VFIG    R   AL  G  +C A++  R
Sbjct:   11 LPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQVTSPSDIGGGDSRSRKFNMGEEVLTMNNGCICCSVRGDLVRLIAQILKRNGDRNQLDGIIIETTGMADPGPVVQTFF---------------------------------------------AEPLVAATCELDGIITVVDAKHILQHLRP---------------GAGVEHEC-----------QEQIAFADRVLLNKTDLVSSTELQEVRTRIRGINGAVSITECLHCRVDPALLLNVQTFDLDSILKRQPGFLKAEKDSHSHXXXXXXXXXXXXXXXXXXXXXDG------------AHHGGHRHKHSLV--SSVGLSLPE-PILVALLEEWIDDLLETEGDDLL-RYKGVVNVA-------------GIDRKYVFQGVHTLFNGRFADNWAPGETRETRFVFIGKNLDRT--ALTEGFLACRATKDLR 389          
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: C1MKM0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MKM0_MICPC)

HSP 1 Score: 140 bits (354), Expect = 1.490e-33
Identity = 140/474 (29.54%), Postives = 197/474 (41.56%), Query Frame = 1
Query:    1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQG---NAKAKSSTQVEGS---------GEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFAD-------ILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSD--WPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVA 1359
            LPVT++TGFLGAGKTT VNH+L   HG+ +AVIENEFG V+IDDAL+G    E  +E + +I M NGC+CC VRGDLV AL  L   A                                                                         K D +I+E +GL + APV      N +   + +++           G   A +    A    V+ Q+A +DR+LLNK DL++    D ++D +K+    A V +     VD+D VLGV SFS++K LE+D  F D         A +N                                     +     +  HD  G  SVG+ VAEG +D+A+  +++   L+ E    I+R KGV+        GA          + V QG++       S   W     RV++MVFIG    R +  L  G R+C+A
Sbjct:   10 LPVTIVTGFLGAGKTTLVNHILKGDHGKLIAVIENEFGAVSIDDALVG----ENIKEKENIITMDNGCVCCTVRGDLVRALLTLKDRAK------------------------------------------------------------------------KFDHVIIETTGLADPAPVAFTFFINPEIAEAYRIDSILCLADAKHIGLHLAEEKPDGAVNEAVQ-QVAFADRILLNKIDLVNDNLLDDVIDTLKSINAVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEVDPDFLDDEEGHAKAEAIENAAADGTDDASKTAACTDDSHGHSHSQINRQGTTLNEPAKKRPRKKKHDLTGVSSVGI-VAEGELDFAEVNTFMMKVLQ-ENALSIYRSKGVM---CFKDQGAV---------KFVFQGVHEQINFGPSSVMWGQDEPRVNKMVFIGRNLNRKE--LEDGFRACIA 390          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBU6_ECTSI2.080e-22184.98Similarity to cobalamin synthesis protein n=2 Tax=... [more]
A0A835ZKA2_9STRA2.720e-5041.15CobW/HypB/UreG, nucleotide-binding domain-containi... [more]
A0A5C1A4S2_9BACT4.500e-3532.61GTP-binding protein n=2 Tax=Limnoglobus roseus Tax... [more]
A0A812YTS9_9DINO1.410e-3436.04Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A7S4S2X6_9DINO2.720e-3435.00Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A1Y5HX51_OSTTA3.670e-3429.26PRLI-interacting factor L-like protein n=3 Tax=Ost... [more]
A0A7S1ELX2_HEMAN6.320e-3428.45Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A3R7J9R0_9STRA8.120e-3431.03CobW C-terminal domain-containing protein n=4 Tax=... [more]
H3H4U4_PHYRM1.010e-3332.85CobW C-terminal domain-containing protein n=7 Tax=... [more]
C1MKM0_MICPC1.490e-3329.54Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6009contigEcto-sp13_S_contig6009:4980..8614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score639.4
Seed ortholog evalue1.4e-180
Seed eggNOG ortholog2880.D8LBU6
Model size1506
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ATP binding
EggNOG OGsCOG0523@1,KOG2743@2759
Cds size1506
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6009.16617.1prot_Ecto-sp13_S_contig6009.16617.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6009 4980..8614 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463837.0593307-CDS-Ecto-sp13_S_contig6009:4979..52641681463837.0593307-CDS-Ecto-sp13_S_contig6009:4979..5264Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 4980..5264 -
1681463837.0705657-CDS-Ecto-sp13_S_contig6009:5637..57661681463837.0705657-CDS-Ecto-sp13_S_contig6009:5637..5766Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 5638..5766 -
1681463837.0806262-CDS-Ecto-sp13_S_contig6009:5947..62081681463837.0806262-CDS-Ecto-sp13_S_contig6009:5947..6208Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 5948..6208 -
1681463837.0916455-CDS-Ecto-sp13_S_contig6009:6540..66691681463837.0916455-CDS-Ecto-sp13_S_contig6009:6540..6669Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 6541..6669 -
1681463837.1017613-CDS-Ecto-sp13_S_contig6009:7150..73091681463837.1017613-CDS-Ecto-sp13_S_contig6009:7150..7309Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 7151..7309 -
1681463837.1122074-CDS-Ecto-sp13_S_contig6009:7656..80191681463837.1122074-CDS-Ecto-sp13_S_contig6009:7656..8019Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 7657..8019 -
1681463837.124465-CDS-Ecto-sp13_S_contig6009:8434..86141681463837.124465-CDS-Ecto-sp13_S_contig6009:8434..8614Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6009 8435..8614 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6009.16617.1

>prot_Ecto-sp13_S_contig6009.16617.1 ID=prot_Ecto-sp13_S_contig6009.16617.1|Name=mRNA_Ecto-sp13_S_contig6009.16617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=502bp
LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDG
GVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPP
PRQQQTQQEAGKSPPPPYPGGDQLGGAAATAVAPPSSEAAAALDTATTGG
VEAAPAAVAAAKLDGIILECSGLDELAPVLQGNAKAKSSTQVEGSGEEGA
TDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGAS
VTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNNNSNNHDGHH
HHHRHGEAKASTPPHGGAEKSAAAAASSPSGEHRHAHDRLGAQSVGVEVA
EGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGA
GRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRS
CVASRRARPPPPKPRAIVERERGSGVGGGGGGFASRLGSVKFGGGENDLF
L*
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mRNA from alignment at Ecto-sp13_S_contig6009:4980..8614-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6009.16617.1 ID=mRNA_Ecto-sp13_S_contig6009.16617.1|Name=mRNA_Ecto-sp13_S_contig6009.16617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3635bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6009:4980..8614- (Ectocarpus species13 EcNAP12_S_4_19m)
TTGCCGGTGACGGTCATCACCGGCTTCCTGGGCGCGGGGAAGACGACGTT TGTGAACCACCTCCTGTCGGCACGGCACGGCCGGAAGCTCGCGGTAATCG AAAACGAGTTTGGAGAAGTCGCGATCGACGACGCGCTATTGGGGGACGGC GGCGTCGAGAGGGGAGAGGAGGCCCAGCAGGTTTGTGCGGGGCGTTGCTT CATGTTGGGCTGTTACGGGTTTTCACTGGCAATGCATGCACTGCGCTGCT AGAGGTGGGTCATACCTTCAAGCGATTGGTTGACTGCTGTTGACTGCTGT GCTGAATCAACCGGCCGCCGTGGACATTCAAAACGTCCGTGGACGTTGTG CGTCTTGCTTGTTTCCGAGGACGCGTCCGTTTGCATTGGGAGATGTTCTG AGCCTGTACCATCTACATGTGTGTCGCGGTCGCTGTTGTTCGATGGCGCC CTTTGCTTGTGACTTTAGTCCGGTAGCTCCACAAGAGCCCGTAGCCCCCC CTCCCCGAAAAAGGAAAAATAAAGTCGGTGCAAAACCGTCAACACCCAGA TAGATGATGACACTGCCGCTCGTCCAACTTGATCCCCTCTCTCAGGTAAT CCTCATGCCCAACGGTTGCATGTGTTGCAGAGTCAGGGGCGACCTGGTGG ACGCGCTCAAGCGGCTTATCGTTAGCGCGAGCGCGCGCGCCTCTTTGGGC GACGGAGACCCGCCGCCACGGCAACAGCAGACACAACAAGAGGCAGGCAA GTCACCGCCACCGCCGTACCCCGGCGGCGATCAACTCGGCGGTGCCGCGG CGACGGCGGTGGCGCCGCCGTCTTCCGAGGCTGCTGCTGCTCTGGACACC GCTACTACAGGAGGGGTAGAGGCGGCGCCGGCGGCGGTGGCGGCGGCCAA GTTGGACGGGATAATCCTGGAATGCTCTGGTCTCGATGAACTCGCCCCTG TGCTGCAGGTGAGGTTTTGAGCCGTGTCGTGGCGCTGCATGTTCTGGCGA CGAACACACCCGCGTGAACGTGCGTGTTTGCTGCTGGGCTTTTGAGGTCT CCATCCCCAAGTACTCGCGGGAGTCAGCCCCCCCCCCTTCTAAACTCCCG TCGCATCGTATCTGCGAAAAACCGGTTTCACGTGTGTTACTTTCTCTCTG GCCGCGACTTCGCGGCGGCAACGAAGACTTTTTTCGCGGATCTGTTCGTC CAAGAACACGTCCGTCTCGACGCGGTTGTGTGCCTGTGCGATTCGCCGCG GTTGGTGCGCACACTGATGGCGCCGCCGCCGCCGCCACCGCCGACAGTGA CGGAGGGCAACGCCAAAGCGAAGAGCTCAACGCAGGTCGAGGGTAGCGGA GAAGAAGGAGCGACCGACTCGAGTGCTGCTGCTGCTGCTACGCTGGTGAA GAGCCAGCTGGCCCTGTCGGATCGAGTCCTGCTGAACAAGTCGGATCTCA TCTCTCCTGCCCAAGTGAGTCGGTCCCACACAGCTGCCCGTGACTTCTCG GGGCGAGAACCAAAAAGTGGTGGGCAGCGTTTCCTTCACTATGCAGGGCA CCTCTGCTGCCTTCGACTCTCTTGCGGTCGGAAAGTTTTGTTCAAGCACG CCTGCTGCTTTCATACCACCATCTTGTACAGTACCAAGGCGTACCGGGTC GTCCGTTGCAAACGTCGTTTTCGCATGTTATACGGTACTCTCTCACGGTC TTAATCGGACTGTGTTGTCGTCCTGGACGAGTTCTCGCCCAGCAATCACG CGAGACCCCACGCCGACCCCGTCGATTTCGTTTGTTCTCACACCACGTGT CCCATTTTCGTCGGTTGTTGAGAGTAGACACCGGGCATCGAGAGTTCCGA CGGCGTAACAACACACACACACTTACATATTTGTTGCACACACACACTTA CATATTTGTTGCGTCCGTTCCTCGCTTCTCTTGGTGGCGCTGAAGGGGGA TGCTCTGGTGGATGCCGTCAAGGCGAACTTCCCCGGCGCGTCGGTGACGC GCTGCGAGCGCGGCAAGGTGGACGTGGATCTCGTCCTGGGGGTAGACAGC TTCTCGCTGGACAAGGCTCTAGAGGTGAGAGCCGAGCGCGTTGTCACGGT GTGGTCTCTTTTACTCTGGTCTGGTCGCCTTTGTGTTTCGCGTCTCCCCC CCCTGGAGCTCCAGCGTCTGTCCCCTGTTGTTTCAGCCCCAAGCGTTTGG TTGACGTCCCCTCCCCCCCCCCCTCCCCCAATCTTCGGTCTGTATGAAAG TGTACTCTCCTTGGCCGCAACTCTGTTTCGTGCCCCCCCCCCCCCTACCG GCACGTTGTCTCCCTCCCCAGCACGTTGTCGGAGCCGTCCCTCATTTCCT TCACCCCCCCCCCCATTTCCCCGCTTTTTTCGGTTTTAATAAAACGAATG CCCCAGATGGACAAGCACTTCGCGGACATCCTCGCCGACAAGAATAATAA CTCCAACAACCACGACGGACACCACCACCACCACCGGCACGGGGAAGCCA AGGCAAGCACGCCGCCGCACGGGGGAGCCGAGAAGAGCGCAGCGGCGGCA GCATCATCCCCGAGTGGCGAGCATCGCCACGCGCACGACCGCCTAGGGGC GCAGAGCGTCGGGGTGGAAGTTGCGGAGGGGCCGATCGACTGGGCCAAGT TCACCTCGTGGCTCAAGGTAACCCAGTCGGCGCGAGGTGTGCCGGAAATC GTCTGACTGGTGGGGGGGCGTGTGTGCATGAAAACGTTCCACACACCTAA CAAGCGCTAGCACCCTTTTTCGACAACAGAAAGGCTGACAGAGCCTGTTT TCTGGCGTGTTTGTCCCCTCGTCCCTGGCACTTTTTCTATCGATCCAGGG CTTCCTCGAGAAAGAAGGCGAGGAGTTGATCTGGAGGCTGAAGGGGGTGT TGTGGACGACCGCCGCTAGCGGGAGCGGCGCCGCGACGACGTGGGGCTGG GGGGCTGGAAGGCGAACGGTAGTGCAGGTATGGAACTAGTCGCACAAGCC GACATTGTTGCCGTACATGGGAACATGGTCCAAATTGGAGAGGATGTGAT GTCGAGAGGTGTGTGGTGCTGGTGCAGCAAAGGCGTTGTCTGTGTTTGGG ACGGATGGCGTCATTTTCGCACGGCTTATTTCTGTCACAGCAGAAAGCAC GGAAAGACGAGGGTCGCGCTGTGTGTCTGTCTCCTTCGAAATACATGCTT GTAGGTCGGCTTCCGACTCCAAAATACGTCGAACCGCTAGCGAACCGCTA ACCTTGTTGCGCTGTGTCTGAGACAACAACAACAACAACAACAACATTCC TCAGCGCGCACCGCTGTGTTCCCTGGTACGGCGTTTTCCCACATGACTAG GGGCTGTACGGCCACTTCGAGTCCGAGGTATCTGATTGGCCCGCTGGGGC AACACGCGTCTCTCGGATGGTGTTCATCGGCGACCTGTGTCCCAGGGTAC AGGAGGCGCTGCGAGCGGGGGTTCGCTCGTGCGTTGCGTCACGCCGAGCC CGGCCACCACCCCCGAAGCCGCGCGCTATCGTAGAAAGGGAGCGTGGTAG CGGTGTCGGCGGCGGTGGCGGTGGATTCGCTTCTCGCCTAGGATCCGTCA AGTTTGGGGGAGGGGAAAACGATCTGTTCTTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6009:4980..8614-

>mRNA_Ecto-sp13_S_contig6009.16617.1 ID=mRNA_Ecto-sp13_S_contig6009.16617.1|Name=mRNA_Ecto-sp13_S_contig6009.16617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6009:4980..8614- (Ectocarpus species13 EcNAP12_S_4_19m)
TTGCCGGTGACGGTCATCACCGGCTTCCTGGGCGCGGGGAAGACGACGTT
TGTGAACCACCTCCTGTCGGCACGGCACGGCCGGAAGCTCGCGGTAATCG
AAAACGAGTTTGGAGAAGTCGCGATCGACGACGCGCTATTGGGGGACGGC
GGCGTCGAGAGGGGAGAGGAGGCCCAGCAGGTAATCCTCATGCCCAACGG
TTGCATGTGTTGCAGAGTCAGGGGCGACCTGGTGGACGCGCTCAAGCGGC
TTATCGTTAGCGCGAGCGCGCGCGCCTCTTTGGGCGACGGAGACCCGCCG
CCACGGCAACAGCAGACACAACAAGAGGCAGGCAAGTCACCGCCACCGCC
GTACCCCGGCGGCGATCAACTCGGCGGTGCCGCGGCGACGGCGGTGGCGC
CGCCGTCTTCCGAGGCTGCTGCTGCTCTGGACACCGCTACTACAGGAGGG
GTAGAGGCGGCGCCGGCGGCGGTGGCGGCGGCCAAGTTGGACGGGATAAT
CCTGGAATGCTCTGGTCTCGATGAACTCGCCCCTGTGCTGCAGGGCAACG
CCAAAGCGAAGAGCTCAACGCAGGTCGAGGGTAGCGGAGAAGAAGGAGCG
ACCGACTCGAGTGCTGCTGCTGCTGCTACGCTGGTGAAGAGCCAGCTGGC
CCTGTCGGATCGAGTCCTGCTGAACAAGTCGGATCTCATCTCTCCTGCCC
AAGGGGATGCTCTGGTGGATGCCGTCAAGGCGAACTTCCCCGGCGCGTCG
GTGACGCGCTGCGAGCGCGGCAAGGTGGACGTGGATCTCGTCCTGGGGGT
AGACAGCTTCTCGCTGGACAAGGCTCTAGAGATGGACAAGCACTTCGCGG
ACATCCTCGCCGACAAGAATAATAACTCCAACAACCACGACGGACACCAC
CACCACCACCGGCACGGGGAAGCCAAGGCAAGCACGCCGCCGCACGGGGG
AGCCGAGAAGAGCGCAGCGGCGGCAGCATCATCCCCGAGTGGCGAGCATC
GCCACGCGCACGACCGCCTAGGGGCGCAGAGCGTCGGGGTGGAAGTTGCG
GAGGGGCCGATCGACTGGGCCAAGTTCACCTCGTGGCTCAAGGGCTTCCT
CGAGAAAGAAGGCGAGGAGTTGATCTGGAGGCTGAAGGGGGTGTTGTGGA
CGACCGCCGCTAGCGGGAGCGGCGCCGCGACGACGTGGGGCTGGGGGGCT
GGAAGGCGAACGGTAGTGCAGGGGCTGTACGGCCACTTCGAGTCCGAGGT
ATCTGATTGGCCCGCTGGGGCAACACGCGTCTCTCGGATGGTGTTCATCG
GCGACCTGTGTCCCAGGGTACAGGAGGCGCTGCGAGCGGGGGTTCGCTCG
TGCGTTGCGTCACGCCGAGCCCGGCCACCACCCCCGAAGCCGCGCGCTAT
CGTAGAAAGGGAGCGTGGTAGCGGTGTCGGCGGCGGTGGCGGTGGATTCG
CTTCTCGCCTAGGATCCGTCAAGTTTGGGGGAGGGGAAAACGATCTGTTC
TTGTAG
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