mRNA_Ecto-sp13_S_contig6009.16617.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: D8LBU6_ECTSI (Similarity to cobalamin synthesis protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU6_ECTSI) HSP 1 Score: 631 bits (1628), Expect = 2.080e-221 Identity = 430/506 (84.98%), Postives = 436/506 (86.17%), Query Frame = 1
Query: 1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPA-AVAAAKLDGIILECSGLDELAPVLQGNAKAKSSTQVEGSGEEGATDSSAAAAA----TLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLGSVKFGGGENDLFL 1503
LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSAS RASLGDGD XXXXXXXXXXXXXXXXXXXXXXXX VEAAPA AVA A+LDGIILECSGLDELAPVLQGN AKSST VE E TLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGA+VTRCERGKVDVDLVLGV+SFSLDKALEMDKHFADILADK XXXXXXXXXXXXXXXXXXXXXXXXXXX SP +HRHAHDRLGAQSVGVEVAEGPIDW KFTSWLKGFLEKEGEELIWRLKGVLWTTAA+GSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDL PRVQEALRAGVRSCVA RRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLG+VKFGGG NDLFL
Sbjct: 74 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASERASLGDGDAPQQTQQEADKSXXXXXXXXXXXXXXXXXXXXXXXXEAAVARDTATAGG---VEAAPAPAVAGAQLDGIILECSGLDELAPVLQGNGDAKSSTPVEEGAEXXXXXXXXXXXXXXXXTLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGAAVTRCERGKVDVDLVLGVESFSLDKALEMDKHFADILADKKKNSDKHDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGRDHRHAHDRLGAQSVGVEVAEGPIDWTKFTSWLKGFLEKEGEELIWRLKGVLWTTAANGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLSPRVQEALRAGVRSCVAVRRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLGAVKFGGGGNDLFL 576
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A835ZKA2_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKA2_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.720e-50 Identity = 200/486 (41.15%), Postives = 248/486 (51.03%), Query Frame = 1
Query: 4 PVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQVEG--------------------SGEEGATDSSAAAAAT--LVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHF--ADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRARPP 1380
PVTVI GFLG+GKTT +NH+L A HG +LAV+ENE G VA+DD LL D +V+LMPNGC+CCR RGDL DAL+RL+ XXXXXXXXXXXX LDGII+E SG E+APVLQ + + + Q++ G+E + + AAAAA + QLAL+D VLLNK+DL+ P AL ++ A+ A+VT C RG VDV +L +FSL +A+ D F + NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +G ++ G E + G +D A+ W G +WR+KGVLW A G GA RR V+QG+ GH E E DWP G R SR+V IG L ++ LR + A PP
Sbjct: 44 PVTVICGFLGSGKTTLLNHVLRAPHGLRLAVLENEVGAVAVDDELLSDA--REAALGPEVVLMPNGCLCCRTRGDLRDALRRLVERQQXXXXXXXXXXXXXXXXXXXXXXL--------------------------------------------------LDGIIMELSGASEVAPVLQTFFADDFVQGALQLDSVVCVCDAPRLAQQLLPPQQQRGDELSAEVGAAAAAAHAITAEQLALADTVLLNKADLVDPDTLAALRASLSASMAAAAVTECVRGAVDVRRLLNTGAFSLSRAVAADDAFLAGGSYGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGLRTAGAEHSRGAVDTARVVDWAHGVXXXXXAARVWRIKGVLWGDGAGGRGALA-------RRVVLQGVGGHVEVEEGDWPPGRPRRSRIVLIGPLSDELEAELREALARVFEPVAAAPP 470
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A5C1A4S2_9BACT (GTP-binding protein n=2 Tax=Limnoglobus roseus TaxID=2598579 RepID=A0A5C1A4S2_9BACT) HSP 1 Score: 144 bits (363), Expect = 4.500e-35 Identity = 150/460 (32.61%), Postives = 218/460 (47.39%), Query Frame = 1
Query: 4 PVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQVEGSGEEGATDSSAAAA----ATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVS-DWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVA 1359
PVTV+TGFLGAGKTT +NH+L+A HG+K+AVIENEFGE+ +D L+ + EE + M NGC+CC VRGDL+ L L+ K D I++E +GL + APV Q + + +++T+++G D+ AA + V Q+A +D +LLNK+DL +PA+ D L ++ A V R RG V++D +L V F+LD+ LE + F + +K+ XXXXXXXX XXXXXXXXXX EHRH + SVG+ VAEG + KF W+ L+ G +L +R+KG+L G +R V QG++ ++E + W G RV+++VFIG R + L +G ++C+A
Sbjct: 18 PVTVLTGFLGAGKTTLLNHILTANHGKKIAVIENEFGEIGVDQDLV----ISSDEE---IFEMNNGCICCTVRGDLIRILGTLMKRRD------------------------------------------------------------------------KFDAILIETTGLADPAPVAQTFFADDEVRANTRLDGIVT--VVDAKHAAQQIGRSKEVTEQIAFADVILLNKTDLATPAELDELERRIRRMNAVAKVYRTNRGVVEMDKILNVGGFNLDRVLEFEPDF--LKEEKHEXXXXXXXXGEHCGENCGXXXXXXXXXX-------------EHRHDEE---VSSVGI-VAEGSVQIKKFNEWISTLLQTRGPDL-YRMKGILSIK-------------GDAKRHVFQGVHMQLDAEPNRPWADGEPRVNKLVFIGKNLNR--DELTSGFKACLA 361
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A812YTS9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YTS9_9DINO) HSP 1 Score: 144 bits (363), Expect = 1.410e-34 Identity = 111/308 (36.04%), Postives = 149/308 (48.38%), Query Frame = 1
Query: 1 LPVTVITGFLGAGKTTFVNHLL-SARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPV---------LQGNAK---------AKSSTQVEGS-GEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILAD 864
+ T++TGFLGAGKTTF+N +L S HGR++AV++NEFG+V IDD L+ +E+ A + I+MPNGC+CCRVRGDLVDAL+RL + A+ G KLD +++ECSGL E+ PV +Q + K A S Q+EG EGA A A L++ QLA+SD LLNK DL+ AQ D + ++ P V C GKV++ VL V+SFSLD A+ +D HF AD
Sbjct: 35 IRATILTGFLGAGKTTFLNFVLKSLGHGRRIAVVQNEFGKVPIDDQLML---LEK--SAAETIVMPNGCLCCRVRGDLVDALRRLADAPETLAAEASGGQ--------------------------------------------------------------KLDSLLIECSGLSEVLPVAQTFFSDPFVQASFKLDSVVCVCDAASFDQLEGGVASEGAAG---ADVAQLLREQLAISDVCLLNKCDLVDSAQRDQVSSRIREVNPAVRVVPCRHGKVNLAQVLQVNSFSLDGAISLDAHFLTSDAD 272
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A7S4S2X6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2X6_9DINO) HSP 1 Score: 140 bits (354), Expect = 2.720e-34 Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1
Query: 10 TVITGFLGAGKTTFVNHLL-SARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQV---------------EGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFAD 852
T++TGFLGAGKTTF+N +L S HG+K+ V++NEFG V++DD L+ VE+ E +V++MPNGC+CCRVRGDLV+AL+RL A+ L D A A LDG+++ECSGL E+ PV Q + ++S Q+ EG+G++ T + + L++ QLA+SD LLNK DL+ Q D + V+A P V C GKV++ VL ++SFSL+ AL +D HF +
Sbjct: 60 TILTGFLGAGKTTFLNFVLKSLGHGQKIGVVQNEFGIVSVDDQLML---VEKSEA--EVVVMPNGCLCCRVRGDLVEALRRL-----AQRRLPGADA--------------------------------------------------------AGAAEVPLDGLLIECSGLSEVLPVAQTFFADPYVQASYQLDGVLCVCDAGNFEALEGNGKDVGT--AGPEVSRLLREQLAISDVCLLNKCDLVDSTQRDKIGTRVRAVNPAIKVVPCRHGKVNLGQVLKINSFSLESALSLDAHFLE 291
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A1Y5HX51_OSTTA (PRLI-interacting factor L-like protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A0A1Y5HX51_OSTTA) HSP 1 Score: 142 bits (358), Expect = 3.670e-34 Identity = 139/475 (29.26%), Postives = 192/475 (40.42%), Query Frame = 1
Query: 4 PVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPV------------------LQGNAKAKS-STQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYG--HFESEVSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASR 1365
PVT++TGFLGAGKTT VNH+L HG K+AVIENEFG V+IDDAL+ E +E + VI M NGC+CC VRGDLV AL L K D +I+E +GL + APV + A AK + +E +GA + + Q+A +DR+LLNK DL+S + + L +++ A V R + VD+++VLGV+SFSL+K LE D F D + HD G SVG+ V EG +D+ ++ L++ + +R KGVL G G A + V QG++ +F S W R++RMVFIG R AL AG R+C+A +
Sbjct: 57 PVTIVTGFLGAGKTTLVNHILRGDHGLKIAVIENEFGAVSIDDALVS----ENIKEKEDVISMDNGCVCCTVRGDLVRALLTLRDRGK------------------------------------------------------------------------KFDAVIIETTGLADPAPVAFTFFINPEIAEHYRIDSILCLADAKHVALHMEEEKPDGAVNEAV--------QQVAFADRILLNKIDLVSEEELETLEKTLRSVNASAEVLRTQNSVVDLNVVLGVNSFSLEKTLETDPSFMDE----------------------------------------------NKENKHDLTGVSSVGIAV-EGELDFQAVNEFMMNLLQENALNM-YRSKGVL---CFEGQGDA---------KFVFQGVHEQINFGPAASTWAENEPRINRMVFIGRNLDR--PALEAGFRACLAKK 385
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A7S1ELX2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELX2_HEMAN) HSP 1 Score: 140 bits (353), Expect = 6.320e-34 Identity = 132/464 (28.45%), Postives = 193/464 (41.59%), Query Frame = 1
Query: 1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLI-----VSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSG------LDELAPVLQGNAKAKSSTQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESE-VSDWPAGATRVSRMVFIGDLCPRVQEALRAGVRSCV 1356
+PVTV+TGFLGAGKTT +N++L++ HG K+AVIENEFGEV IDDAL+ ++ E ++++ M NGC+CC VRGDL+ L +++ + A + G DP A A+LD I+ LDE+ P EGA + Q+ +DR+LLNK+DL+SP + + +++ V RCER V +D VLGV +F L + ++MD F LA++ H H HD SVG++ +G +D AK W+ L+ +G + I+R KGVL G + V QG++ F E ++W G RV+RMVFIG R + L G +C+
Sbjct: 7 IPVTVLTGFLGAGKTTLLNYILTSNHGLKVAVIENEFGEVGIDDALVK----QQYETSEEIFEMNNGCICCTVRGDLIRILNKILKRKTRLDAVLIETTGMADPAPVAQTFFMDEGIQ---------------------------------------------ARARLDAIVTLVDAKHVIQHLDEVKP-------------------EGAENECV--------EQVVFADRILLNKTDLVSPEHLEEVEKRLRSINRTGEVIRCERAVVPLDKVLGVRAFDLQRVVDMDPGF---LAEEG------------------------------------------HEHTHDSS-ITSVGIQK-DGMLDLAKLNKWMSTLLKDKGVD-IYRSKGVLSIQ-------------GMKEKFVFQGVHMTFNGEPTTEWKEGEARVNRMVFIGKNLDRKE--LTEGFDACL 331
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: A0A3R7J9R0_9STRA (CobW C-terminal domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9R0_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.120e-34 Identity = 148/477 (31.03%), Postives = 207/477 (43.40%), Query Frame = 1
Query: 1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEA-----------QQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQ---GNAKAKSSTQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFA----DILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSD-WPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRAR 1374
LPVT++TGFLG+GKTT +NHLL+ HG++ A+IENEFGEV +DD L+ G + G ++V+ M NGC+CC VRGDLV RLI R V LDGII+E +G+ + APV+Q ++ +++G+G E + Q+A +DRVLLNK+DL++ A+ + ++ S+T C+ +VD L+L V +F +D L+ F D L+++N XXXXXXXXXXXXX RH D L SVG+ + PI W+ LE EGE+L+ R KGV+ G R+ V QG++ F +D W G TR +R VFIG R AL G C A++ R
Sbjct: 11 LPVTILTGFLGSGKTTLLNHLLTENHGKRFAIIENEFGEVGVDDQLIRQAGSKSGTAGGDARSRKFNMGEEVLTMNNGCICCSVRGDLV----RLIAEILKRN-----------------------------------------------------------------VDRYHLDGIIIETTGMADPAPVVQTFFAEPMVAATCELDGAGVEHEC-----------QEQIAFADRVLLNKTDLVTSAELKEVHSRIRDINGAVSITECQHCRVDPSLLLNVQTFDIDSILKSRPDFLKTEKDNLSNENSHDHDHDDKKDSGHXXXXXXXXXXXXX----------------RHGSDSL-VSSVGLSTYD-PILVTLLEEWIDDLLETEGEDLL-RYKGVVNVA-------------GIDRKYVFQGVHTLFNGRFADHWAPGETRETRFVFIGKNLDRT--ALTDGFLDCRATKHLR 373
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: H3H4U4_PHYRM (CobW C-terminal domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=H3H4U4_PHYRM) HSP 1 Score: 142 bits (359), Expect = 1.010e-33 Identity = 158/481 (32.85%), Postives = 210/481 (43.66%), Query Frame = 1
Query: 1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALL-----------GDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASL--------GDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSG---LDELAPVLQGNAKAKSSTQVEGSGEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFADILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSD-WPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVASRRAR 1374
LPVT++TGFLG+GKTT +NHLL+ HG+K A+IENEFGEV +DD L+ GD + ++V+ M NGC+CC VRGDLV + +++ R L G DP A P A +LDGII L L P G+G E + Q+A +DRVLLNK+DL+S + + ++ S+T C +VD L+L V +F LD L+ F D + XXXXXXXXXXXXXXXXXXXXX + G HRH H + SVG+ + E PI A W+ LE EG++L+ R KGV+ G R+ V QG++ F +D W G TR +R VFIG R AL G +C A++ R
Sbjct: 11 LPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQVTSPSDIGGGDSRSRKFNMGEEVLTMNNGCICCSVRGDLVRLIAQILKRNGDRNQLDGIIIETTGMADPGPVVQTFF---------------------------------------------AEPLVAATCELDGIITVVDAKHILQHLRP---------------GAGVEHEC-----------QEQIAFADRVLLNKTDLVSSTELQEVRTRIRGINGAVSITECLHCRVDPALLLNVQTFDLDSILKRQPGFLKAEKDSHSHXXXXXXXXXXXXXXXXXXXXXDG------------AHHGGHRHKHSLV--SSVGLSLPE-PILVALLEEWIDDLLETEGDDLL-RYKGVVNVA-------------GIDRKYVFQGVHTLFNGRFADNWAPGETRETRFVFIGKNLDRT--ALTEGFLACRATKDLR 389
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Match: C1MKM0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MKM0_MICPC) HSP 1 Score: 140 bits (354), Expect = 1.490e-33 Identity = 140/474 (29.54%), Postives = 197/474 (41.56%), Query Frame = 1
Query: 1 LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASARASLGDGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAPAAVAAAKLDGIILECSGLDELAPVLQG---NAKAKSSTQVEGS---------GEEGATDSSAAAAATLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGASVTRCERGKVDVDLVLGVDSFSLDKALEMDKHFAD-------ILADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGEHRHAHDRLGAQSVGVEVAEGPIDWAKFTSWLKGFLEKEGEELIWRLKGVLWTTAASGSGAATTWGWGAGRRTVVQGLYGHFESEVSD--WPAGATRVSRMVFIGDLCPRVQEALRAGVRSCVA 1359
LPVT++TGFLGAGKTT VNH+L HG+ +AVIENEFG V+IDDAL+G E +E + +I M NGC+CC VRGDLV AL L A K D +I+E +GL + APV N + + +++ G A + A V+ Q+A +DR+LLNK DL++ D ++D +K+ A V + VD+D VLGV SFS++K LE+D F D A +N + + HD G SVG+ VAEG +D+A+ +++ L+ E I+R KGV+ GA + V QG++ S W RV++MVFIG R + L G R+C+A
Sbjct: 10 LPVTIVTGFLGAGKTTLVNHILKGDHGKLIAVIENEFGAVSIDDALVG----ENIKEKENIITMDNGCVCCTVRGDLVRALLTLKDRAK------------------------------------------------------------------------KFDHVIIETTGLADPAPVAFTFFINPEIAEAYRIDSILCLADAKHIGLHLAEEKPDGAVNEAVQ-QVAFADRILLNKIDLVNDNLLDDVIDTLKSINAVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEVDPDFLDDEEGHAKAEAIENAAADGTDDASKTAACTDDSHGHSHSQINRQGTTLNEPAKKRPRKKKHDLTGVSSVGI-VAEGELDFAEVNTFMMKVLQ-ENALSIYRSKGVM---CFKDQGAV---------KFVFQGVHEQINFGPSSVMWGQDEPRVNKMVFIGRNLNRKE--LEDGFRACIA 390 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6009.16617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6009.16617.1 >prot_Ecto-sp13_S_contig6009.16617.1 ID=prot_Ecto-sp13_S_contig6009.16617.1|Name=mRNA_Ecto-sp13_S_contig6009.16617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=502bp LPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGback to top mRNA from alignment at Ecto-sp13_S_contig6009:4980..8614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6009.16617.1 ID=mRNA_Ecto-sp13_S_contig6009.16617.1|Name=mRNA_Ecto-sp13_S_contig6009.16617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3635bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6009:4980..8614- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6009:4980..8614- >mRNA_Ecto-sp13_S_contig6009.16617.1 ID=mRNA_Ecto-sp13_S_contig6009.16617.1|Name=mRNA_Ecto-sp13_S_contig6009.16617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6009:4980..8614- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |