mRNA_Ecto-sp13_S_contig6.16579.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: D7FPQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ3_ECTSI) HSP 1 Score: 211 bits (536), Expect = 3.430e-62 Identity = 145/257 (56.42%), Postives = 161/257 (62.65%), Query Frame = 3
Query: 435 MAAALQKLQNQNAMLLEAVEEKSRQVLELGALVEAL-EPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACRRQLEIVSSAGPRLDTQPAAVSSLARIDGNEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTGGWKGRAQQIVMLKATVKQLQTQLTNGRDPGQSGETRSKQGRKDVDSLAQEEIHFMERHRGHAIEQLEAR 1202
MAAALQKLQNQNAMLLEAVEEKSRQ+ E + L E G+ A GD R + Y CL V S + R + S+A ++T + + G + QIV LRNKLHEAQEE+KKT+RALSKEVGGTSLGLGR L DTGGWKGRAQQIVMLKATVKQLQTQL NGRDPGQSGETRSKQGRKDVDS AQEEIH+MERHRGHAIEQLEA+
Sbjct: 1 MAAALQKLQNQNAMLLEAVEEKSRQLPESASRGGRLGERANGVSKTA--------GDRVIRSTSVGY---------------------PAGGCL-------VFSPD----RWKRRTPSTAASTIETYHHKL-----MRGTCTPAKQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRTLNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEAK 212
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A812W7Q1_SYMMI (CCDC13 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7Q1_SYMMI) HSP 1 Score: 95.1 bits (235), Expect = 3.350e-18 Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 3
Query: 627 DYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACRRQLEIVSSAGPRLDTQPAAVSSLARIDG---NEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTGGWKGRAQQIVMLKATVKQLQTQLTNGRDPGQSGETRSKQGRKDVDSLAQEEIHFMERHRGHAIEQL 1193
DYRD KI+ LAK+ R+ L KER + + + + +R+L++VSS R A S +R D + +L+ Q+ LR KL +Q+E KK RAL+KE+G + + +A+ D GW+GRAQQIVMLKA VK+L+ G+ G G TR G +DVD+ A+EE+ M R A+E L
Sbjct: 1 DYRDTKIVSLAKKCRNLTRSLNKERGLNQSIKDKINTRQDDNGRLKRELDLVSSPAARAAATRARESKGSRGDAPSKDSAQLQKQVEDLRRKLTASQDETKKLSRALAKELG-EGVSVEQAVDD--GWRGRAQQIVMLKAKVKRLEA----GQTSGGVGRTR---GTRDVDAKAEEELQSMSAERQQAVEAL 182
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A7S2ST90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST90_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.080e-18 Identity = 92/273 (33.70%), Postives = 139/273 (50.92%), Query Frame = 3
Query: 456 LQNQNAMLLEAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACRRQLEIVSSAGPR-------LDTQPAAVSSLARID---GNEER--------LRH---QIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDT---GGWKGRAQQIVMLKATVKQLQTQL---TNGRDPGQSGETRSKQGRKDVDSLAQEEIHFMERHRGHAIEQL 1193
L +N+ L + + ++ QV +LG ++EALEPVPG+D L +L G D + D RDVKI+QLAK+ R+ + K ++ + EA +E+ + +Q+ ++S R + T P +S + D G E+R LR ++V+ R ++ +A EE KK L KE+G L G A+ GW+GRA+ IV+L++ VK+LQ L T RDP + Q DVD +A +EI ME R A EQL
Sbjct: 16 LAQENSKLSQELADRRLQVKKLGVMLEALEPVPGVDAERLLDLLE-GQDV----AEADPRDVKIVQLAKKSRNLMLENNKLKSQLRAQQTEAAAKDREIESLNKQMAAMASPAAREVIMKQLIGTHPKDEASEKQRDEGEGKEDRSPSFASAQLRRKDREVVEARQRVAKATEEAKKLKNLLHKELG---LAEGEAIPQKVFEDGWRGRAETIVLLRSKVKKLQGDLEAATGRRDPKMAA-----QSHHDVDRMAAQEIADMEGERRRATEQL 275
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A6G0XPV6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.760e-16 Identity = 76/206 (36.89%), Postives = 108/206 (52.43%), Query Frame = 3
Query: 447 LQKLQNQNAMLLEAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACRRQLEIVSSAGPRLDTQPAAVSSLARIDGNEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTGGWKGRAQQIVMLKATVKQLQTQL 1064
+Q L+ QN+ L+ +++ RQV EL L+E +EP+PGLD N+ VL G D D D RDVKI+ +AK++R L KER A + + E + Q +++ S Q S +ID + + +LR K E+KKT RAL +EVG + L L G +GRAQQIVMLKA VK+L+ +L
Sbjct: 75 IQALKLQNSELVATIKDLKRQVAELEVLLEGVEPIPGLDINSLKDVLQ-GADI----VDHDIRDVKIVHMAKKLRQTKVTLTKERNKAAGA--SSRIAELEQALHQAQEDLLRSQRQVHKLQLGEKPSEPKIDLSSVVPVKKFDELRVKFEAQTIELKKTQRALQREVG-EDVPLAELLDGESGKRGRAQQIVMLKAKVKKLEKEL 272
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A7S1U590_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U590_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.980e-16 Identity = 79/253 (31.23%), Postives = 127/253 (50.20%), Query Frame = 3
Query: 465 QNAMLLEAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACRRQLEIVSSA----------------GPRLDTQPAAVSSLARIDGNEERL------RHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTGGWKGRAQQIVMLKATVKQLQTQLTNGR--DPGQSGETRSKQGRKDVDSLAQEEI 1151
QN L+ + K+RQ+ L ALV AL+P+PG+D + +L GD +DLD RD KI++L+K++R + L++ER A R+ E+ R QL+ V+S G ++ + VS ++ ++ + R Q +L++KL + E + + L +E+G L A+ G W+GRAQQI +LK VK+L+ +L NG PG RS+ KDVD+ A+ +
Sbjct: 41 QNQALVAELSAKTRQIETLEALVAALKPLPGMDVAKYREMLESAGDG--HGEDLDVRDAKIVELSKKMRGVNVALQRERDRSRAAARQVAGKDAEIELLREQLDAVASPAVRNKLRHMQTEARRRGSSIEADASIVSPAEVVEQAQKAMKDAAAVRSQNDELKHKLEVQRIENNQLNTTLKREIGDGDL-FNAAIAGEG-WRGRAQQITLLKTKVKRLERELRNGGHGSPGTQNFQRSRDA-KDVDARAEAHV 288
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A1V9ZNI5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNI5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 6.110e-16 Identity = 80/255 (31.37%), Postives = 131/255 (51.37%), Query Frame = 3
Query: 396 DVMGNNVARLSGGMAAALQKLQNQNAMLLEAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKEL-VACRRQLEIVSSAGPRLDTQPAAVSSLAR-IDGNEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRAL-TDTGGWKGRAQQIVMLKATVKQLQTQLTNGRDPGQSGETRSKQGRKDVDSLAQEEI 1151
D+ G+ +Q+L+ N+ LL +++ + +Q+ EL L+EA+EP+PG+D AF +L D D RDVKI+ AK+IR KE+ + L K + VA QL+ + +L +P +S+ + I + + + +L+ K+ E+KKT RAL +EVG + L + ++ G +GRAQQIVMLKA +K+L+ + + ++ +T KDVD AQEE+
Sbjct: 59 DIQGSFQGEFKWDGVNEIQQLKQHNSELLASIKTQKQQIAELQLLLEAVEPLPGVDVEAFRDILQGSEVVDH-----DIRDVKIVHQAKKIRQVTLAYNKEKNRAAAVTTKMTELEKAVEVAQHAQLKAERALQKQLLNEPKKISTDEKEISAS---MAKKFEELKAKVDSQTFELKKTQRALLREVG-DDVSLSEIIESNESGKRGRAQQIVMLKAKIKKLERAAADSSNNQETTKT------KDVDQKAQEEL 298
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A8J2X1K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1K6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.270e-15 Identity = 84/232 (36.21%), Postives = 124/232 (53.45%), Query Frame = 3
Query: 483 EAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKL----EKERASCLKARR---EADVLSKELVACRRQLEIVSSAGPRLDTQ-PAAVSSLARIDGNEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTG-GWKGRAQQIVMLKATVKQLQTQLTNGRDPGQSGETRSKQGRKDVDSLAQEEI 1151
+ + +K +QV ++EAL PVPG++P + ++ ++D RD KIIQLAK+ R+ L EK R L R +A L+KEL A R L+ ++ P + Q PA + + + E R + +LR+KL + E K RAL +EVG L AL + G GWKGRAQQIVMLK V++L+ R+ +SG R + R+DVD++AQ E+
Sbjct: 160 DELRQKRQQVKNYQVMLEALAPVPGVNPETIYAGINGA--------EVDVRDAKIIQLAKKARNYTVALASEREKNRKLALDFERLKIDATALAKELKA-RGPLDPDAARYPFQENQAPAKEAPVTKASQRERRAEKRSAELRHKLETERAETDKLRRALVREVGDK---LEDALANEGEGWKGRAQQIVMLKNKVRRLE------REVSESG-VRKRPPRRDVDAVAQREL 372
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A329T1T7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1T7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.090e-15 Identity = 88/273 (32.23%), Postives = 133/273 (48.72%), Query Frame = 3
Query: 447 LQKLQNQNAMLLEAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVL---SKEL-------------VACRRQLEIVSSAGPRLDTQPAAVSSLARID-GNEE-RLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTGGW------KGRAQQIVMLKATVKQLQTQLTNGRDPGQSGETRSKQGRKDVDSLAQEEIHFMERHRGHAIEQL 1193
LQ+L N NA L + +QV L +EA PVPGL+ +A +L ++ D D RDVKI+ AK +R L++E+ A +++ L +K+L R E +++ G Q + +R D GN+ L++ +L++K Q+E+KKT RAL +EVG + L + +T +GRAQQI MLKA VK+LQT+L R S ET DVD AQ+++ + HR ++QL
Sbjct: 103 LQELTNANATLTSEARDLRQQVKALQIQLEAQAPVPGLNVDAVQDIL-----LEKDNLDHDVRDVKIVHQAKTLRTLKRSLQREKQQAADAAKQSQALETANKQLEEEVDTLKLKLQRFQARAAAEKINNNGAVTQPQRPESPTESRSDTGNDSGSLQNLCDELKSKNTTLQQELKKTQRALVREVG-DDVSLEEIIGNTDSTVSGASRRGRAQQIFMLKAKVKKLQTRLATMRPGTTSTETHDSGNVLDVDKRAQQDLSGQQMHRQKLLDQL 369
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: T0R3B0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R3B0_SAPDV) HSP 1 Score: 86.7 bits (213), Expect = 1.110e-14 Identity = 75/229 (32.75%), Postives = 114/229 (49.78%), Query Frame = 3
Query: 378 EDPAPS-DVMGNNVARLSGGMAAALQKLQNQNAMLLEAVEEKSRQVLELGALVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACRRQLEIVSSAGPRLDTQPAA-VSSLARIDGNEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRAL-TDTGGWKGRAQQIVMLKATVKQLQ 1055
ED P+ + NN + + +Q L++QNA L+ A++ +Q+ EL L+EALEP+PGLD +AF +L D D R+VKI+ AK++R KE+ A + + + + A + A RL QP V+ E ++ +L+ K E+K+T RAL +EVG + L L G +GRAQQIVMLKA +K+L+
Sbjct: 46 EDVPPAIETSSNNQSDFKWDGISDIQSLKHQNAELVAAIKSHKQQINELQLLLEALEPIPGLDVDAFKDILQGSEIVDH-----DIRNVKIVHQAKKLRQATLAYNKEKTRAAAASTKMAEMERAVEAAQTLQLKAERALQRLQQQPRPDVAKKVPSPEKEVAASKKLEELKLKCEAQAVELKRTQRALQREVG-DDVALSDILDASDSGKRGRAQQIVMLKAKIKKLE 268
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Match: A0A3R6Y5N2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Y5N2_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.670e-14 Identity = 77/237 (32.49%), Postives = 112/237 (47.26%), Query Frame = 3
Query: 447 LQKLQNQNAMLLEAVEEKSRQVLELGA---------------LVEALEPVPGLDPNAFLSVLHFGGDTDRRKKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLSKELVACR------RQLEIVSSAGPRLDTQPAAVSSLARIDGNEERLRHQIVQLRNKLHEAQEEIKKTHRALSKEVGGTSLGLGRALTDTGGWKGRAQQIVMLKATVKQLQTQLTNGRDPGQSG 1094
+Q LQ +N+ L+ +++ QV E G ++EA+EP+PGLD N+ VL D D RDVKI+ AK++R L KE+ A L K+L ++L G + + +P A ++ + E+ LR K A E+KKT RAL +EVG + L L GG +GRAQQIVMLKA VK+L+ +L + +P G
Sbjct: 50 IQALQLKNSELVATIKDYKHQVTEYGLCLISFCGLCVCRLQLMLEAMEPIPGLDVNSLRDVLQGAEVVDH-----DIRDVKIVHQAKKLRQAKIALNKEKVKGAGASGRIAELEKQLHDAEENYHKSQRLVHKLQLGEKPEPKPEATTNTVPLKKFED--------LRVKYEAATIELKKTQRALQREVG-DDVPLADVLDGEGGKRGRAQQIVMLKAKVKKLEKELQSRSEPDTVG 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6.16579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6.16579.1 >prot_Ecto-sp13_S_contig6.16579.1 ID=prot_Ecto-sp13_S_contig6.16579.1|Name=mRNA_Ecto-sp13_S_contig6.16579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp MEILRPLGKRFCLTFFCIFFCLSDETSMEQALQPASSVMELKYDPAGLALback to top mRNA from alignment at Ecto-sp13_S_contig6:12315..16161+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6.16579.1 ID=mRNA_Ecto-sp13_S_contig6.16579.1|Name=mRNA_Ecto-sp13_S_contig6.16579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3847bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6:12315..16161+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6:12315..16161+ >mRNA_Ecto-sp13_S_contig6.16579.1 ID=mRNA_Ecto-sp13_S_contig6.16579.1|Name=mRNA_Ecto-sp13_S_contig6.16579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6:12315..16161+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |