mRNA_Ecto-sp13_S_contig5981.16556.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 1407 bits (3643), Expect = 0.000e+0 Identity = 743/899 (82.65%), Postives = 745/899 (82.87%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQL--------------------------------------------------------------DGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINH----------------------------ERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSC------------------------------------------------------------SIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 2247
LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQL DGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTR LDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLR RVPRDVASRIA VTAQDLRAVAAEME+GSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINH ERMAVPPPSSCFPRDGQ RNNVHDDKYAH+MYLDLAGLTGGANLHKCQATCRKFNHGDSC SIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH
Sbjct: 182 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQPSPEVETDAPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 1080
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 1406 bits (3640), Expect = 0.000e+0 Identity = 742/899 (82.54%), Postives = 744/899 (82.76%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQL--------------------------------------------------------------DGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINH----------------------------ERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSC------------------------------------------------------------SIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 2247
LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQL DGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTR LDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLR RVPRDVASRIAGVTAQDLRAVAAEME+GSSGFSALADRPGIRDLIKNME VHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINH ERMAVPPPSSCFPRDGQ RNNVHDDKYAH+MYLDLAGLTGGANLHKCQATCRKFNHGDSC SIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQ LDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH
Sbjct: 102 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQPSPEVETDVPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQNLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 1000
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 902 bits (2332), Expect = 2.690e-301 Identity = 511/916 (55.79%), Postives = 588/916 (64.19%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLDG-------------------------------------------------------PAPPAAADHAD----DGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAA--AGQP-PDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINH--------------------------------ERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSCSIAHLV-----------NDNGLP--------------------------------------------------------------DPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 2247
LRVC EC L +++MPEAALANGLWLG+FP+HLR A+FVE++AASPVR+SG+VLALDELKVGN+ GSAKSLMR TFTFYMQDAYGVQL+LPACD DIAGS T LVGA + QLR+L GARR M+EDL F LDKDN L G P PA D A D T P ++E NA+M +G+D AV+ +KP RLR LG + SGD SL Q AAA+A AA AG+P P GT A+VLTHSG++VSDF PGLF+ A++DLFPHGVGG LDKR RSL KRWA+ILL+RRD RFRK RTFL+CVCALIFRREAI NAR+KLR + +AS +A VT DL AAEME GS FS+L + GIR LI+ MESV +GASWTI+NKR TRMIAIS+++QMGQPL WLTI+PAD NSPIVM LAGV++DVTS+LK+DFP Y +KLR VA+DPVASA F+H TI VLTCLLRFGA DGDGGVLGRVKGYVGMTEEQKRL LH HLLVW+YGYNDF SFR LMDKTP RY ELA YLD ++FNQIATL+DIN E M VPP S FP G+ + D YA +MYLDLA +T GANLHKCQATC K+NH DS D+G P DP+S RF+ E +RLH+HINSFNPVI FA+RSNMD+K+LL+ SDAKGLL+YILNY+TKTEQTLDVLLPLL PV ERIR S APEKE+AVRLVRSCLCKQLSSL IGGPAAASKV L D ++SH
Sbjct: 263 LRVCAECFRDLSRNRMPEAALANGLWLGEFPEHLRSASFVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATPAQLRRLLGARRSMIEDLNTFLLDKDNALVGEHTLARQAQQSPENLATFSVNGDVPKAILDSIVAVQDKTGSYANARSTHAHENREPEVPANTDRAGGILRDDTLPTAPMVVEINAVMDTGEDRAVAESSKPARLRGLGSSM-------------CSGDPSLAQQAAAEAAAAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEME-GSFDFSSLNE--GIRSLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVDPAHLPPEVGNHDSAQPALDPLLRDAKECMPVPPARSTFPPQGEPPDEDLRDAYARLMYLDLACVTPGANLHKCQATCHKYNHKDSTRXXXXXXXXXXXCRFGFGDDGRPLAQETVVQRGRCVFDTSGNMTIDGVVYSHSSADDAAAAAANAAFQEAFDNAVADVRQELARSDPVSGRFSVEHKRLHTHINSFNPVIAFAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSH 1162
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 849 bits (2193), Expect = 5.750e-283 Identity = 477/894 (53.36%), Postives = 547/894 (61.19%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQL---------------------------------------------------------DGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDI------------------------NH----ERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSC------------------------------------------------------------SIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 2247
++VC+ECL SLLK ++PEAALANGLWLGDFP+HLR ATFVEM+AASPVRISGMVLALDELK G+V GSAKS MRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVG KP++ QLR+L GARR+MV+DLL FQLDKDN+L D P P + DDG T PF+IETNA++ +GDDLAV+ KP RLR LG + + ASG SL EAI NARWKL R+ + ++ VT +DL AA ME+G S L+DR GI LIK MESVHAGASWT +NKRSTRMIAIS+IMQMGQPL W+TINPADVNSPIV+ + GV++DV+S+LKA+FP Y DKLR VANDPVASADFFH TID VL+CLLRFGA DGDGG+LGRVKGYVGMTEEQKRL LHCHLLVWV+GYNDFASFR+LMD+TP RY ELA+YLD +IFNQ+ATL+DI NH E + PP++CFPRDG+ R VHD YA +MYLDLAG+T GANLHKC ATC K+NH +SC SIA L+ D+GLPDPLSDRF+A++RRLHSHINSFNPVIQFAIRSNMDLK+LLRDSDAKG+LFYILNYSTKTEQTLDVLLPLL PV ERIR+++D +KELAVRLVRSCLCKQLSSL+IGGPAAASKV D+PDH+ISH
Sbjct: 298 MQVCKECLQSLLKKRIPEAALANGLWLGDFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDKDNRLVGQHTLAREAQLAPENLHGYSNDGSIPKAVLDAILPIKDSAKAYSNARSTHAHGNREDDPTPDGGIESTDDGP--TAPFVIETNAVVDTGDDLAVAGACKPNRLRDLGRAMQT-----------ASGSPSLA-------------------------------------------------------------------------------------------------EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGGVEGISTLPVGDTCQTDPNHRHAKECLPTAPPTNCFPRDGEDRCPVHDQDYARLMYLDLAGITPGANLHKCNATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGNMIIDGVVYSVHSTDDAAAAASTPAFQTAFDESIATLIGDDGLPDPLSDRFSADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISH 1081
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 736 bits (1899), Expect = 9.460e-234 Identity = 422/920 (45.87%), Postives = 531/920 (57.72%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQL----------------------DGPAPPAA----------------------------------ADHADDGAGA--TPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGV-VLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPP-----------------------DGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINH-----------------------------ERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSCSIAHLVNDNGLPD-----------------------------------------------------------------PLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPD 2232
LRVC ECL L +K P A LANGLW+GDFP+HL+ +T+VEM AASPVR SGMV AL++LKVG + GSA +MRGTFTF+ Q+AYGV+ LP CDTDIAGS TCALVGA+P+ QLRKL GARR +++L+ FQ D+ NQL DG PP AD A DG A P FII+ A++PSG + AVSS ++P RLRTL ++NS P+A DA AAG P + T+N LVL H+G+MV DF+ PG+ + AYFDLFPHGVGGHLDKR R L+ +WA+ LLRRRD RFRK+RTF++C+ A+IFRREAISNA WKL RV R VA + G+T DL AVA E+E G+S ALA+RP R LI+ M+SV+ ASWT++NKR+ RM AIS I+Q+GQPLFW+TINPAD NSP+VM LAGV+LDV+SRLK D P Y +L+ +A DPVASA+FFH IDAV+ LLRFGA DGDGGVLGRVK YVGMTEEQ+RLTLHCHLLVWVY ELA +L + IF+Q+A+ D+ H E +A+PPPS+CFP G R+ D++Y + +LA +T AN+H+C TC K H +SC + L +++RFTA+ RR H +NS+N +I F RSNMD+K LLRDSDA+G LFYILNYSTKTE T+D LL +LAPV ERI+++++GAP A +LVR+C CK ++ + +G PAAASKV + D
Sbjct: 2300 LRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADEAVDGQNADDNPAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINSAGTAAPTAMDVEEDDAQ-----------AAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWVYQ-------------------ELASFLSRTIFSQVASDEDVQHAMTGGIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLEYTD 3189
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 701 bits (1809), Expect = 3.530e-227 Identity = 408/885 (46.10%), Postives = 511/885 (57.74%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKM--------------------VEDLLAFQLDKDNQLDG-----------PAPPA-----AADHADDG-------AGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDIN--------------------------------HERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSC------------------------------------------------------------SIAHLVN-DNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRIS 2244
LRVC CL + K+KM G LGDFP+ R A +VEM+AA+PVR+SG +AL+E K+ + GSAKSLMRGTFTFYMQ+ Y V LPAC TD+AG+FTCAL G+K QLR LFGARR M ++D L +K+N + P P +A + ++G GA FIIETN ++P+G+D+A S + RLR L ++ PS T + AS+ + A A++ AAA + PP NA+V+TH+G MVSDF++ GLFV AYF+LF HG+GGHLD R R + K WAQI LRRRD RF K +TF +CVCAL FRREA +NARWK++ +P D A +A ++ +D+ A A E+E G+ SFIMQMGQPL+W+T +PAD NSPIV+ LAGV +DVTSRLK+DFP Y ++LR VA D V SA F+H+ AVLTC LRFGA DGDGGVLGRVK VGMTEEQ+RL LHCHLLVWVYGYNDF+ FRELMDK+P +Y +LA +L++VIFNQ+ATL+D N ER+A PPP++CFPRDG R VHD+ ++ ++YLDLA +T +LHKCQ C KFNH DSC SI+ L + DN +P +DRFTA LRRL +HIN +NP IQF IRSNMDLK+LL D DAKG++FYILNY+TKT +S G KE+ VRLVRSCLCKQL+SLS GGPAAASKVFDL D +IS
Sbjct: 249 LRVCSTCLKDMRKNKMGRQRKYYGFMLGDFPEEFRSANWVEMIAANPVRMSGTAIALEEFKIHGISGSAKSLMRGTFTFYMQNLYAVGKHLPACATDVAGAFTCALFGSKQKPEQLRPLFGARRSMAQTSDENPRTYAEDGFIPKEIQDALVPVTEKNNTVANARSTHAQGNREPEEPGGDSSTSAKYGNNGNTDSSTDEGAPASFIIETNVVLPTGEDMANSREYRSTRLRALQSMMKKS---APSRTTNVATGASMREQANAKSAAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCD-------------------------------------SFIMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEYEHMSRASEDTGTSEAGPDPQHVAAKERIARPPPTACFPRDGVDRCRVHDEAFSRLVYLDLAEITPAVSLHKCQLACNKFNHRDSCRFGYGKDGKAFEQETAVLRGPCTFHTNGNMTINGVVYPPGDPSTSSGIAAAAAFQAAFDASISELDDGDNCNSNPKADRFTAVLRRLGAHINPYNPFIQFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTAN------------------ESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKIS 1075
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 580 bits (1496), Expect = 2.060e-185 Identity = 308/549 (56.10%), Postives = 377/549 (68.67%), Query Frame = 1
Query: 748 FHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDIN-------HERMA--------VPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSCSIAH------------------------LVNDNGLP----------DPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 2247
F++ GLFV A+FDLFPHG+GGHLD+R R + + WA+ILLR+RD RFRK ++FL+CV ALIFRREAI NARWKL R+ R A +A +T +DL A A EME GSS +SALA+R +R L+ MESVHAG+SWTIYNKRSTRMIAIS IMQ+GQPL+W+TI PAD SPI +LR VA+DPVASA +H+ DAVLTCLLRF A DGDGGVL RVKGY+GMT+EQ+RL LH H+LVWVYG+NDF+SFR+LMDK P +Y +LA +L++VIFNQ+ + +++N H A V P FP + R VHDD Y MYLDLA L GA LH+CQ TC KFN+ D C + + NG+ +P SDRFTA LR L +HIN +NP+I F IRSNMDL ++LRDSDA+GLL+Y+L+YSTK+EQTLDVLLPLL PV +RIR+ ++G P KE AVRLVRSCLCKQL+SL+IGGPAAASKVF LPD +ISH
Sbjct: 230 FYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTPRASSEPEPENVSDPLHAFPVE---RCFVHDDSYPRFMYLDLAELVPGAQLHRCQPTCHKFNNRDKCRFGYGDKGKSFEQETTVVRGPCTFHTNGSMTINGVDAFNECVSASSEPESDRFTATLRLLSTHINPYNPIIHFLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISH 751
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE) HSP 1 Score: 481 bits (1237), Expect = 2.630e-151 Identity = 326/836 (39.00%), Postives = 410/836 (49.04%), Query Frame = 1
Query: 1 LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLDGPAPPAAA----DHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDIN-----------------------------HERMAVPPPSSCFPRDGQTRNNVHDDKYAHIMYLDLAGLTGGANLHKCQATCRKFNHGDSC------------------------------SIAHLVNDNGLP------------------------DPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISH 2247
LRVC L L K+K P+AA AN +LGDFP L+ AT+VEM+AA PVR+SG ++AL++LK S +L Y +D P D S T + +V R + E + D Q DG + DD G PP + ET A+MPSG DLA SS +P RLR L L+ + ++G ASL Q K ++FL+ VC LIFRREAI NARWKL RV R A +A +T +DL A EME GSS +SALA+R +R L+ MESVHAG+SWTIYNK + VASA ++H+ DAVLT LLR A DGDGGVLGRVKGY+GMTEEQ+R+ LH H++VWVYG+N+F+SFR+LMDK P +Y +LA +L++VIFNQ+A+ +D+N ERMA PP +CFPR G R VHDD YA +MYLDLA L GA LH+CQ TC KFN+ + C +I+ +V G P +P SDRFTA +RRL +HIN +NP+I F IRSNMD K++LRDSDA+GLL+Y+L+YSTK+EQTLDVLLPLL V +R R + +G P KE AVRLVRSCLCKQL+SL+I GPAAASKVF LPD +ISH
Sbjct: 150 LRVCSIRLADLRKNKCPKAAKANVFFLGDFPAELKEATWVEMLAAGPVRLSGTIIALEQLKSVVCLVSEANLQG-----YPEDG-----STPQAIQDALISVT----DRRNTVAAARSTHAHGNREPEQPVGGTSGSDGQRDGEDSDRQGSGDVNGDDDDDGVLPPCVNETKAVMPSGSDLAKSSQYRPTRLRALQAELS---------LSDSTGPASLAQ--------------------------------------------------------------------------------KHKSFLFFVCVLIFRREAIKNARWKLTGRVSRRTAETLATITPEDLAAAGKEMEQGSSAWSALANRNAVRTLLTTMESVHAGSSWTIYNK-------------------------------------------------------------SERSVASALYYHSVTDAVLTWLLRVDARDGDGGVLGRVKGYLGMTEEQRRVMLHSHVVVWVYGFNEFSSFRDLMDKRPEKY-KLARFLERVIFNQVASFADVNLAMHGHDHTPRASSELEPENVSDPLVRPAKERMAQPPSPACFPRQGVKRCPVHDDSYARLMYLDLAELVPGAQLHRCQPTCHKFNNRNKCRFRYGDKAKSLEQETTLFRGPCTFHTNGGMTISGVVYPPGDPSTAESMVAAQAFQNAFNECVSVASEPESDRFTATVRRLSTHINPYNPIIHFLIRSNMDSKVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLFLVVQRKRCEKEGEPAKETAVRLVRSCLCKQLTSLNIDGPAAASKVFGLPDAKISH 820
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE) HSP 1 Score: 275 bits (704), Expect = 2.060e-80 Identity = 182/541 (33.64%), Postives = 259/541 (47.87%), Query Frame = 1
Query: 217 MRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAK-PSVGQLRKLFGARRKMVEDLLAFQLDKDNQL----------------------DGPAPPA------------------------------------------------------AADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDG-TQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHL-DKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAE 1602
MRGT FY ++ V LP T + T L G K P L +L GAR+ M+ D++ + LDK+ +L +G P A D +DG +++ A++ G+D A S+ P +RTLG L+ A+A GQPP G T NALV+ H G+++ D +N +V FP G G L R R + RW QILL RRD+ +R R FL+CV A+ FR EA++N R+KL + A IA +T + L A+A E++SG + L +RP IR L++ M++V A+WT + K R A S + GQP FW+T+NP+D+NSP VM G +++++S P + +L + NDPVASA FFH TI+AVL +LRF A DGDGG LG +K Y+GMTEEQ RL LH HL+VWV+G+ R+ + + ++ ELA+
Sbjct: 1 MRGTSVFYANNSSSVTTELPLVATGLLDMITVVLAGKKNPKTSDLGRLLGARKSMIRDIIDYMLDKEEKLVVGFPLAKSLPISEENLDSYSENGAIPKVLLDSILTSNDPLNVHARVSSTYTRSSDEIGTEKVTISDDXXXXXXXXXXXXXXXAGDDLEDGKAC----VLQNYAVVDPGEDTATSAERLPDAMRTLGSELD------------------------AEAALRRGQPPPGGTSNALVVPH-GEILDDCNNNSAWVEGVMHAFPEGCGSPLCPTRKRLVSFNRWIQILLNRRDSSWRIDRCFLFCVAAIRFRHEALANVRFKLSVQPNSANADAIASITKEHLHAMAEELKSGKKTSAVLNNRPEIRSLLRTMQAVSGDATWTDHGKHRARTTAHSMFILFGQPFFWMTVNPSDLNSPFVMHYGGHDINLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHETIEAVLKYILRFQANDGDGGPLGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTSREQLRQDVGYSLKKHAELAK 512
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Match: A0A6H5K355_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K355_9PHAE) HSP 1 Score: 271 bits (692), Expect = 3.750e-77 Identity = 220/681 (32.31%), Postives = 311/681 (45.67%), Query Frame = 1
Query: 217 MRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAK---PSVGQLRKLFGARRKMVEDLLAFQLDKDNQLDGPAP---PAAADHADDGA--GATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVV----LNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHL-DKRTRSLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRRRVPRDVASRIAGVTAQDLRAVAAEMESGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTP---------TRYFELAEYLDKVIFNQIATLSDINHERMAVPPP---------------------------SSCFPRDGQTRNNVHDDKYAHIMY------LDLAG-LT--------GGANLHKC---------------------QATCRKFNHGD----SCSIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLR 1992
MRGT FY + V LP T + T L G K PS L +L GAR+ M++D + + L + P P + + D + GA P ++++ I+ S D L V + +R + +N P+++++ G + A + R PP GT NALV+ H G+++ D +N +V + FP G GG L R + RW QILL R D +R R FL C A+ FR EAISN R+KL R A+ IA +T +DL +A E++SG + +RP IR L + ++V A+WT + K A S +Q G P FW+T NP+DVNSP VM Y +L NDPVASA FFH T++AV+ +LRFGA DGDGG LG +K Y+GMTEEQ RL LH HL+VWV+G+ REL D R E+ Y+ ++I+NQ+ +L ++ + P + +P TR D++ + Y +DLA LT GG N K T G+ S + A V DN + D F +RR +HINS+N V+Q AIRSNMD+++ R
Sbjct: 1 MRGTSVFYANSS-SVANELPLAVTGLVDMITVVLAGKKKRRPS--DLGRLLGARKSMIKDTINYMLKVKLVVSSPLAKYLPFSEESLDSYSEDGAIPKVLLDS--ILTSNDPLNVRASVSSSYVRDSNEIGTEKVNLSDDSSPTSSSSDEGSELDAEAALRRGR----PPPGGTSNALVVPH-GEILDDSNNNSAWVEGFMHAFPGGCGGPLCPTRRNPVSFNRWIQILLNRGDIAWRVDRCFLCCAAAIRFRHEAISNVRFKLSVRPNSTDANAIASITKEDLHGMADELKSGKRTSALKNNRPEIRALFRKTQAVSGDATWTDHGKHRVLATAHSMFIQFGLPFFWMTANPSDVNSPCVMQCGE---------------YRKRLDITVNDPVASATFFHETMEAVVKYILRFGAKDGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTS----RELRDDIGRSLKKHAKLARVQEVLYYIGRLIYNQVMSLEEVEFSLLNASEPVYNNVMLPNASPFDEGIAQQNQSDVVSAEEWPEPLHTREAWKDERKDRMDYRSLGPSVDLASALTESQPMRERGGVNNGKAVIYSDGTLEIDGVRVEVDGPNDQTAALRLQGEILRASAARAKAVEDNVPFEDDDDDFIIRVRRGSTHINSYNWVVQQAIRSNMDIRVRRR 652 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5981.16556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5981.16556.1 >prot_Ecto-sp13_S_contig5981.16556.1 ID=prot_Ecto-sp13_S_contig5981.16556.1|Name=mRNA_Ecto-sp13_S_contig5981.16556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=749bp LRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRIback to top mRNA from alignment at Ecto-sp13_S_contig5981:4419..7220- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5981.16556.1 ID=mRNA_Ecto-sp13_S_contig5981.16556.1|Name=mRNA_Ecto-sp13_S_contig5981.16556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2802bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5981:4419..7220- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5981:4419..7220- >mRNA_Ecto-sp13_S_contig5981.16556.1 ID=mRNA_Ecto-sp13_S_contig5981.16556.1|Name=mRNA_Ecto-sp13_S_contig5981.16556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2247bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5981:4419..7220- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |