mRNA_Ecto-sp13_S_contig59430.16492.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI001421F385 (AAA family ATPase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001421F385) HSP 1 Score: 531 bits (1369), Expect = 9.390e-179 Identity = 269/279 (96.42%), Postives = 270/279 (96.77%), Query Frame = 1
Query: 1 LESLDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSLEIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
LESL DETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKAR FGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPA RHEV RPELPVLDLCYLSWTSFALGYPETALQQC RSLEIAEGGAVSYDLVVANGNACYLHQLRQDH AV RCAQNVINL+TEKGFPHWRSLGVMFQGWLMAATGQS EGIAVFQTALAEHRATGEVLEV YFLGLLADLRGRAG
Sbjct: 716 LESLTDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARIFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAARHEVGRPELPVLDLCYLSWTSFALGYPETALQQCWRSLEIAEGGAVSYDLVVANGNACYLHQLRQDHAAVRRCAQNVINLSTEKGFPHWRSLGVMFQGWLMAATGQSAEGIAVFQTALAEHRATGEVLEVCYFLGLLADLRGRAG 994
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI001BA9AB8C (adenylate/guanylate cyclase domain-containing protein n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BA9AB8C) HSP 1 Score: 159 bits (403), Expect = 1.540e-40 Identity = 110/279 (39.43%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 19 ETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPAR--PAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSL----EIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
E DRR EL L+VA AL AT+G APE G A ARA+ LC G + L+ +LYG+++FH A+ AR + L + E L H G AF +GD A AR HLE+A+AL +P R P V P V L LSWT FALGYP+ A + +L E+A Y L+ A C L Q R A+ +I LA+E+ FPH+ + G +F+GW +A +G+ G+A + L +ATG L YFLGL A+ GR+G
Sbjct: 733 EADRRRRELDLQVALGVALMATQGWAAPEAGRANARARELCEQIGATAQLWPVLYGQWVFHGVRAEHNAARDVADEFLRRAQDHQEASVTLVAHRISGTGAFWRGDVAAARPHLERALALYDPERHHPLAFLYVQDPR--VAALSGLSWTLFALGYPDQARARSHEALRAARELAHLNTQGYALMFA----CTLEQFRCSWREATDRAEKLIELASEQNFPHFLAAGTVFRGWALAQSGELETGLAQLRQGLPAWQATGAGLYEPYFLGLQAEALGRSG 1005
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI0020112AD9 (AAA family ATPase n=2 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI0020112AD9) HSP 1 Score: 159 bits (401), Expect = 2.460e-40 Identity = 102/281 (36.30%), Postives = 152/281 (54.09%), Query Frame = 1
Query: 7 SLDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSL----EIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
+L D+ R EL L+VA AL A +G APE G A ARA+ LC G+ LF +LYG ++FH A+L+ R+ GE LL ++ ++ A G+ +G A +G+ AR HLE+ +AL +PA + + V L LSW+ FALGYPE A + +L E++ + Y L+ C L QLR+D + A ++I LA ++G PH+ + G + +GW++ TG+ G+ + L +ATG V YFL LLA+L GR+G
Sbjct: 481 ALPDDAARWRRELELQVALGVALMAAKGWAAPEVGQANARARDLCERIGDTPWLFPVLYGEWVFHVVRAELESGRSAGEDLLRRAQEQNDAAAETVGNRIVGTAALLRGEPRIARVHLERTLALYDPAAHRSLAFLVAQDPRVSGLSVLSWSLFALGYPEQARARSEEALTDAKELSHRNTLGYALLYG----CILSQLRRDRDEAQGRANSLIALAADQGSPHFLAAGNVVRGWILGTTGELEAGVTQLRDGLTRWQATGAGFLVPYFLSLLAELHGRSG 757
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI0004B9B1A1 (AAA family ATPase n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI0004B9B1A1) HSP 1 Score: 159 bits (401), Expect = 2.860e-40 Identity = 102/281 (36.30%), Postives = 152/281 (54.09%), Query Frame = 1
Query: 7 SLDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSL----EIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
+L D+ R EL L+VA AL A +G APE G A ARA+ LC G+ LF +LYG ++FH A+L+ R+ GE LL ++ ++ A G+ +G A +G+ AR HLE+ +AL +PA + + V L LSW+ FALGYPE A + +L E++ + Y L+ C L QLR+D + A ++I LA ++G PH+ + G + +GW++ TG+ G+ + L +ATG V YFL LLA+L GR+G
Sbjct: 730 ALPDDAARWRRELELQVALGVALMAAKGWAAPEVGQANARARDLCERIGDTPWLFPVLYGEWVFHVVRAELESGRSAGEDLLRRAQEQNDAAAETVGNRIVGTAALLRGEPRIARVHLERTLALYDPAAHRSLAFLVAQDPRVSGLSVLSWSLFALGYPEQARARSEEALTDAKELSHRNTLGYALLYG----CILSQLRRDRDEAQGRANSLIALAADQGSPHFLAAGNVVRGWILGTTGELEAGVTQLRDGLTRWQATGAGFLVPYFLSLLAELHGRSG 1006
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI001BACC221 (AAA family ATPase n=1 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI001BACC221) HSP 1 Score: 154 bits (389), Expect = 1.020e-38 Identity = 101/273 (37.00%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 19 ETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSLEIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
E DR EL L++ AL AT+G APE G A ARA+ LC G S L+ +LYG+++FH A+ AR + L + E A L H G +F +G+ A AR HLEQA+AL +P R + + V L +SWT FALGYPE A + R +L+ A A L A +C+ Q R A+ ++ L+TE+ FPH+ + + +GW + +G+ G+A L RATG L YFLGL A++ GR+G
Sbjct: 492 EADRSRCELDLQITLGVALMATQGWAAPEAGRANARARELCEQIGATSQLWPVLYGQWVFHGVRAEHTAAREVADEFLRRVQDHQETSATLVAHRVSGTGSFWRGEVAAARSHLEQALALYDPERHRSLAFLYVQDPRVAALSGISWTLFALGYPEQARARSREALDSARELAHLNTLGYALLFSCFFEQYRGAWREAQERAETLVELSTEQNFPHFLAAATVIRGWALTQSGELETGLAQLLRGLPAWRATGAGLYEPYFLGLQAEVLGRSG 764
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: A0A1L3LBH9_9HYPH (Adenylate cyclase / Guanylate cyclase n=9 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A1L3LBH9_9HYPH) HSP 1 Score: 154 bits (388), Expect = 1.550e-38 Identity = 101/283 (35.69%), Postives = 148/283 (52.30%), Query Frame = 1
Query: 1 LESLDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSL----EIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
LE L D+ R EL L+VA + AL +G APE G A ARA+ LC G+KS LF +LYG ++FH A+L+ R GE LL ++ E G+ +G AF +G+ A AR +LE+++AL +P + + + V L LSWT FALGYPE A + +L E++ + Y L+ C L QLR D A ++I+LA +G PH+ G + +GW + TG+ + + + LA + TG + +FL LLA + AG
Sbjct: 723 LEGLPDDAARWRQELELQVALSVALMTAKGWAAPEVGRANARARELCERLGDKSRLFPVLYGEWVFHAVRAELEAGRKAGEELLQRAQEEREVSGETVGNRIVGTDAFLRGEIATAREYLERSLALYDPQQHRSLAFLFAQDPRVAGLSVLSWTLFALGYPEQAQARSNEALAAARELSHRNTLGYALLYG----CILSQLRGDWREARDQADSLISLARAQGSPHFLGAGTIVRGWSLGETGELSAAVTQVREGLAAWKVTGARFLIPFFLSLLARVEIHAG 1001
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI00155F3020 (AAA family ATPase n=1 Tax=Bradyrhizobium sp. WBAH10 TaxID=1390116 RepID=UPI00155F3020) HSP 1 Score: 152 bits (383), Expect = 7.180e-38 Identity = 100/273 (36.63%), Postives = 141/273 (51.65%), Query Frame = 1
Query: 19 ETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSLEIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
E DR EL L++ AL AT+G APE G A ARA+ LC G S L+ +LYG+++FH A+ AR + L + E A L H G +F +G+ A AR HLEQA+AL +P R + + V L +SWT FALGYPE A + +L+ A A L A +C+ Q R A+ ++ L+TE+ FPH+ + + +GW + +G+ G+A L RATG L YFLGL A++ GR+G
Sbjct: 732 EADRSRRELDLQITLGVALMATQGWAAPEAGRANARARELCEQIGATSQLWPVLYGQWVFHGVRAEHTAAREVADEFLRRVQDHQETSATLVAHRVSGTGSFWRGEVAAARSHLEQALALYDPERHRSLAFLYVQDPRVAALSGISWTLFALGYPEQARARSHEALDSARELAHLNTLGYALLFSCFFEQYRGAWREAQERAETLVELSTEQNFPHFLAAATVIRGWALTQSGELETGLAQLLRGLPAWRATGAGLYEPYFLGLQAEVLGRSG 1004
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: A0A1U9UN89_CUPNE (Zinc-ribbon domain-containing protein n=1 Tax=Cupriavidus necator TaxID=106590 RepID=A0A1U9UN89_CUPNE) HSP 1 Score: 150 bits (380), Expect = 1.800e-37 Identity = 101/279 (36.20%), Postives = 141/279 (50.54%), Query Frame = 1
Query: 1 LESLDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSLEIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
LE+L D R EL L++A A AT+G APE GA + RA TLC G+ + LF L G FH +L AR E LL L +Q + L++ H A+G + FG G+ AR LEQ+++L P + P VL L Y++ + LGYP+ AL + L +A+ + D A A LH R + + AQ ++ LA E GFP W + G + GW + G++ EGI Q L+ +RA G L +FL LLA+ RAG
Sbjct: 737 LETLPDGPQRARQELALQLALGPAWIATKGFAAPEVGAIYTRALTLCRQLGDTTQLFPTLLGLRTFHIARGELPTARELSEQLLALAQQAQDPALLVQAHRALGASLFGLGELGAARAQLEQSLSLYAPGQYQSPAFFLEPG--VLGLGYMALDLWLLGYPDQALARSEEMLALAQTLSHPPDSATALLFAAELHLYRGETQPMQELAQALLALAAEHGFPFWLANGTILSGWALVTLGRTAEGIEQMQQGLSAYRALGTELSQTHFLVLLAEAYARAG 1013
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: W4LI44_9BACT (Guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Candidatus Entotheonella gemina TaxID=1429439 RepID=W4LI44_9BACT) HSP 1 Score: 150 bits (378), Expect = 3.190e-37 Identity = 97/274 (35.40%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 10 LDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARP---AGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSLEIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADL 822
L + +R E+ L+VA AL A +G G PE A+++A LC LF +L+G + F+ A+L+ A GE L L ++ + G LL H A+G T + G+FA AR HLEQ +AL +P A + +D L V L YL+W + LGYPE AL++ + +L +A+ L + A +L Q R++ + A+ I LA E FP + +LG+ GW +A+ GQ EGIA + + A+H A G + Y L +LAD+
Sbjct: 693 LPETPERVDREIALQVALGQALMAAKGQGVPEVERAFSQALVLCQQVEESPQLFSVLWGLWRFYFVGANLRTALELGEECLSLAQRAQDSGLLLPSHFALGSTFYMLGEFASARSHLEQGVALYDPFEHRELAFSYGID---LKVWCLSYLAWPLWLLGYPEQALRRSQEALTLAQELVHPLSLTGSLDYAAWLSQFRREAPVAQKHAEAAIALAREHEFPQYETLGMSLWGWALASQGQGDEGIAALRQSTADHLAAGADINRPYCLAMLADV 963
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Match: UPI00047DDF58 (AAA family ATPase n=1 Tax=Ensifer sp. WSM1721 TaxID=1041159 RepID=UPI00047DDF58) HSP 1 Score: 150 bits (378), Expect = 3.330e-37 Identity = 103/283 (36.40%), Postives = 146/283 (51.59%), Query Frame = 1
Query: 1 LESLDDETDRRGLELHLRVAQATALRATRGTGAPETGAAWARAQTLCGTQGNKSLLFRILYGRFLFHQGNADLQKARTFGESLLDLGRQLDEEGALLRGHSAIGRTAFGQGDFAEARHHLEQAIALSNPARPAGRHEVDRPELPVLDLCYLSWTSFALGYPETALQQCRRSL----EIAEGGAVSYDLVVANGNACYLHQLRQDHNAVGRCAQNVINLATEKGFPHWRSLGVMFQGWLMAATGQSTEGIAVFQTALAEHRATGEVLEVFYFLGLLADLRGRAG 837
LE L D+ R EL L+VA + AL +G APE G A ARA+ LC + S L +LYG ++FH A+L+ R GE LL ++ E A G+ +G AF +G+ A AR +LE+++AL +P + + + V L LSWT FALGYPE A + +L E++ + Y L+ C L QLR D A ++I LA +G PH+ G + +GW + TG+ E I Q LA + TG V +FL LLA + +AG
Sbjct: 723 LEGLPDDAARWRQELELQVALSVALMTAKGWAAPEVGQANARARELCERLADTSRLLPVLYGDWVFHVVRAELEAGRKAGEELLKRAQEEREVSAETVGNRIVGTDAFLRGEIAIAREYLERSLALYDPQQHRALAFLFAQDPRVAGLSVLSWTLFALGYPEQAEARSNEALADARELSHRNTLGYALLYG----CILSQLRGDWREARDRADSLITLARAQGSPHFFGAGTIVRGWTLGQTGELPEAITKVQEGLASWQMTGARFLVPFFLSLLARVETQAG 1001 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59430.16492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig59430.16492.1 >prot_Ecto-sp13_S_contig59430.16492.1 ID=prot_Ecto-sp13_S_contig59430.16492.1|Name=mRNA_Ecto-sp13_S_contig59430.16492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp MAASCFIKAMPTCRRPGPSVNPCSTLDGSWTKKAPCCAGTAPLAALPSARback to top mRNA from alignment at Ecto-sp13_S_contig59430:3..839+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig59430.16492.1 ID=mRNA_Ecto-sp13_S_contig59430.16492.1|Name=mRNA_Ecto-sp13_S_contig59430.16492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59430:3..839+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig59430:3..839+ >mRNA_Ecto-sp13_S_contig59430.16492.1 ID=mRNA_Ecto-sp13_S_contig59430.16492.1|Name=mRNA_Ecto-sp13_S_contig59430.16492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59430:3..839+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |