mRNA_Ecto-sp13_S_contig59152.16445.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: D7G6V6_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V6_ECTSI) HSP 1 Score: 248 bits (634), Expect = 2.250e-79 Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLA 378
+VEYLNPGGTSKDRIAASMIKEAEATG+LKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLA
Sbjct: 102 KVEYLNPGGTSKDRIAASMIKEAEATGELKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLA 227
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A835Z4W8_9STRA (Putative cysteine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W8_9STRA) HSP 1 Score: 182 bits (462), Expect = 5.810e-54 Identity = 88/126 (69.84%), Postives = 104/126 (82.54%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLA 378
+VE+LNPGGT KDR+AA+MI+ AEA G LK GGTVVEGTSGSTGI LAS+CRA+G+RCVIVMPDDQAGEK +L T GA V+QV+TA+IA+P+HY+N A R+A E G VFMDQFET AN H A
Sbjct: 70 KVEFLNPGGTGKDRLAAAMIEAAEAAGLLKPGGTVVEGTSGSTGISLASICRARGFRCVIVMPDDQAGEKKAMLETLGATVVQVKTAAIASPEHYVNAARRIAAETLGAVFMDQFETSANFNVHYA 195
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A7S1UH35_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH35_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.100e-51 Identity = 88/126 (69.84%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLA 378
+ E LNPGGT+KDRIA +MI+EAEA+G L+ GG VVEGTSGSTGI LA+ C +GYRCVI MPDDQA EKV+LLRTFGAEV VRTA IANP+HY AA A PG VFMDQFET AN +AH A
Sbjct: 58 KAELLNPGGTAKDRIARAMIEEAEASGKLRPGGEVVEGTSGSTGIALAAQCAGRGYRCVIFMPDDQAQEKVDLLRTFGAEVHVVRTAGIANPEHYARKAAAYAEATPGAVFMDQFETLANFRAHYA 183
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A7S2RC68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC68_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.400e-48 Identity = 87/134 (64.93%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERP--------GYVFMDQFETEANLKAHLA 378
+ EYLNPGGT KDRIA +MI+EAE G L GGTVVEGTSGSTGI LA+LC +GYRCVIVMPDDQ+ EK LLR FGAEV+ VRTASI+NP HY+NVA +LA+ G F DQFET AN AH+A
Sbjct: 50 KAEYLNPGGTGKDRIALAMIEEAERRGQLAPGGTVVEGTSGSTGIALAALCACRGYRCVIVMPDDQSPEKQRLLRQFGAEVLVVRTASISNPQHYVNVARKLAKGEEVAGHHLPGGGYFTDQFETLANYHAHVA 183
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A4D9DD93_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD93_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.580e-46 Identity = 85/125 (68.00%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGY-VFMDQFETEANLKAH 372
+VEYLNPGGTSKDR+A MI+EAE G L G TV+EGTSGSTGI LASLCRA+GYRC+IVMPDDQA EK LL+ FGAEV V+ ASIANP+HY N A A E V+MDQFET AN +AH
Sbjct: 87 KVEYLNPGGTSKDRVALRMIQEAEKAGLLHPGSTVIEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKAHLLKQFGAEVEIVKPASIANPNHYCNRARARAEELGDEAVYMDQFETMANFRAH 211
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A6V1K2C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K2C6_HETAK) HSP 1 Score: 161 bits (407), Expect = 2.110e-45 Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAH 372
+ E+LNPGGT KDRIA MI+E E G L++GGTVVEGTSGSTGI LA +CRA+GYRCVIVMPDD + KV+LLR FGAEV V+ ASIANP H+ VA LA++ G VFMDQF T N +AH
Sbjct: 100 KAEHLNPGGTGKDRIALQMIEECEKRGLLREGGTVVEGTSGSTGISLALVCRARGYRCVIVMPDDTSQTKVDLLRMFGAEVKVVKAASIANPKHFCKVAEELAKKIDGAVFMDQFNTGFNYRAH 223
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A2R5GHA2_9STRA (Cysteine synthase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHA2_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.200e-45 Identity = 80/122 (65.57%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 7 EYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAH 372
E+LNPGG+SKDR+A S+++EAE G L GGTVVEGTSGSTGI LA +CRA+GYRCVI+MPDDQA EK ELL GAEV VR ASI N HY+NVA A E PG +F +QFE AN K H
Sbjct: 35 EFLNPGGSSKDRVALSIVEEAEREGRLGPGGTVVEGTSGSTGISLAQVCRARGYRCVIIMPDDQAIEKRELLSRLGAEVELVRPASIVNQGHYVNVARERAAEIPGAIFANQFENMANFKMH 156
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: M4BZJ5_HYAAE (PALP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZJ5_HYAAE) HSP 1 Score: 157 bits (396), Expect = 5.530e-44 Identity = 76/124 (61.29%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAH 372
+ E+LNPGG+SKDR+A ++++AE G LK+GGT+VEGTSGSTGI L+ + RA+GYRCVIVMPDDQA EK LL FGAEV+ V+ ASI N HY+N A RLAR+ G F DQFE AN +H
Sbjct: 82 KAEFLNPGGSSKDRVAKKIVEDAERRGLLKEGGTIVEGTSGSTGISLSLMARARGYRCVIVMPDDQAKEKSRLLSQFGAEVVLVKPASIVNAKHYVNEAKRLARKTQGGYFTDQFENTANFDSH 205
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: W2RD14_PHYPN (PALP domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2RD14_PHYPN) HSP 1 Score: 157 bits (396), Expect = 7.480e-44 Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAH 372
+ E+LNPGG+SKDR+A ++++AE G LK+GGT++EGTSGSTGI L+ + RA+GYRC+IVMPDDQA EK +LL FGAEV+ V+ ASI N HY+N A RLAR G F DQFE AN +H
Sbjct: 97 KAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAKRLARNTEGGYFTDQFENTANFDSH 220
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Match: A0A3R7H2M7_9STRA (PALP domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H2M7_9STRA) HSP 1 Score: 154 bits (389), Expect = 6.260e-43 Identity = 73/126 (57.94%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLA 378
+ E+LNPGG+SKDR+A ++++AE G LK+GGT++EGTSGSTGI L+ + RA+GY+CVIVMPDDQA EK +LL FGA+V+ V+ ASI N HY+N A RLA+ G F DQFE AN +H A
Sbjct: 84 KAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYKCVIVMPDDQAKEKSQLLEQFGAQVVLVKPASIVNAKHYVNEAKRLAQNTKGGYFTDQFENTANYDSHYA 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59152.16445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig59152.16445.1 >prot_Ecto-sp13_S_contig59152.16445.1 ID=prot_Ecto-sp13_S_contig59152.16445.1|Name=mRNA_Ecto-sp13_S_contig59152.16445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp QVEYLNPGGTSKDRIAASMIKEAEATGDLKQGGTVVEGTSGSTGICLASLback to top mRNA from alignment at Ecto-sp13_S_contig59152:34..849+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig59152.16445.1 ID=mRNA_Ecto-sp13_S_contig59152.16445.1|Name=mRNA_Ecto-sp13_S_contig59152.16445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=816bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59152:34..849+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig59152:34..849+ >mRNA_Ecto-sp13_S_contig59152.16445.1 ID=mRNA_Ecto-sp13_S_contig59152.16445.1|Name=mRNA_Ecto-sp13_S_contig59152.16445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59152:34..849+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |