mRNA_Ecto-sp13_S_contig588.16389.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig588.16389.1
Unique NamemRNA_Ecto-sp13_S_contig588.16389.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: D7FVD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD1_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 6.110e-141
Identity = 236/246 (95.93%), Postives = 241/246 (97.97%), Query Frame = 1
Query:    1 ALQVKGWMAGIIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGFDED 738
            ALQVK WMAGIIARSPKLSDIFGSSWSFGQMSTVMR  MSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQV+HDRALAMGDDDPLKPDYSRFLHS+KK+SFSNAVSL HGHLENLSHWRDTVRIKAVTKIQNLFRGK ARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESV+AAQDGVMERFDEIA+DRGFDED
Sbjct:  395 ALQVKTWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCKMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVMHDRALAMGDDDPLKPDYSRFLHSDKKKSFSNAVSLSHGHLENLSHWRDTVRIKAVTKIQNLFRGKQARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVQAAQDGVMERFDEIARDRGFDED 640          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A6H5K633_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K633_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 6.140e-110
Identity = 184/192 (95.83%), Postives = 189/192 (98.44%), Query Frame = 1
Query:    7 QVKGWMAGIIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAK 582
            +VK WMAGIIARSPKLSDIFGSSWSFGQMSTVMR +MSMVHEFELSMISM+DLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHS++KRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAE MAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAK
Sbjct:  181 KVKAWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCSMSMVHEFELSMISMIDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSDQKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAETMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAK 372          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A2R5GJD7_9STRA (F-box/LRR-repeat protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJD7_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.800e-47
Identity = 102/248 (41.13%), Postives = 154/248 (62.10%), Query Frame = 1
Query:    1 ALQVKGWMAGIIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGFDED 738
            ++Q    M+ +I  S  LS +F   W++  +S   R+ MS + ++EL M+S+ DL  ++AR  + +RP L  E  Q +H+RALAMG +DPLKPDY++F+   K +  SN V L HG L N+ +++  V   A   +Q  +R KL R+ AER  K++AF  A  +A+E++R ++  E  KREA  A+ VGR+KWDA VRM+Q KLRA G+   R++VV  + EE V+ AQ  V E F+++  +RG   D
Sbjct:  604 SMQFSSCMSHLICISEDLSKVFNVPWAYANLSEWQRTRMSYIKKYELGMLSLRDLNKRIARLWVTYRPLLALEQKQTMHERALAMGRNDPLKPDYAKFMTRRKHKLQSNVVPLEHGGLGNILYYQSRVTYNAAMMVQAAWRSKLGRRRAEREVKRRAFFAAWRVALEESRAKVEREFAKREAQAANTVGRMKWDATVRMRQGKLRALGQAFSREEVVALLTEEEVKVAQTSVDEEFEKMKLERGIKND 851          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A835YMZ6_9STRA (Clu domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ6_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.020e-44
Identity = 99/246 (40.24%), Postives = 145/246 (58.94%), Query Frame = 1
Query:    7 QVKGWMAGIIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA-ASGVGRLKWDAKVRMKQAKLRA---AGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGFD 732
            + K W+A ++ R  +LS+ FG+ W   + S +MR+  +   + EL +I++ DLK+++AR   +HRP L  E    VH+RALA GD DPLKPDYSRFL + ++   S AV L HGHL +L HWR     +  TK+QNL+RG+ A                           +  +  +REA A+GV R++WDAKVR++QAK+RA   AG+ V R   +  ++EE+  AA+  V  RFDEIA++RG +
Sbjct:  489 EAKRWLAALVRRDRRLSEAFGAPWGAAEASALMRARTAPARQLELGLITLADLKYRLARDGARHRPQLDPERRLAVHERALARGDGDPLKPDYSRFLAAARRACSSAAVPLAHGHLGSLPHWRARAAQRGATKLQNLWRGRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXMELDFRRREAEAAGVARMRWDAKVRVRQAKMRASGSAGDGVTRADALREMLEETAAAAEADVRRRFDEIARERGIE 734          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: W2NLG0_PHYPR (Clu domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2NLG0_PHYPR)

HSP 1 Score: 159 bits (401), Expect = 1.120e-40
Identity = 95/234 (40.60%), Postives = 146/234 (62.39%), Query Frame = 1
Query:   34 IARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGF 729
            I  S  L  + G SW + Q+S  +  +MS + ++ L +I++ DLK+ VAR++ + R  L      ++H+RALAMG++DPLK DYS++L   + +  SN V L HG   NL H+R  V +++  K+Q  +R K  RQ A   A+KQAF  AR +A+E++RQ+I  E   R+A  A  V ++K +AK+RMKQ KLR  G N  R+Q++  ++EESV+ AQ  V  RF E+ ++ G+
Sbjct:  784 IESSKYLCGLLGLSWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTVARQMTQPREELSCWKKAIIHERALAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVILRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALEESRQKIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGNNFSREQILALMVEESVQIAQKEVENRFREMEEELGY 1017          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A662XGU1_9STRA (Clu domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGU1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.530e-40
Identity = 92/235 (39.15%), Postives = 148/235 (62.98%), Query Frame = 1
Query:   31 IIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGF 729
            ++ RS  L ++ G  W +  +S  +  +M+ +H++ L +I++ DLK+ VAR++++ R  L +     +H+RALAMG++DPLK DYS++L   + +  SN V L HG   NL H+R  V +K+  K+Q  +R K  R+ A   A+KQAF  AR +A+E+ RQ+I  E  +R+A  A  V ++K++AK+RMKQ KLR  G    R+QV+  + EE+V+ AQ  V  RF E+ ++ G+
Sbjct:  800 LVERSKYLCELLGHPWKYELLSRFVIQHMNAIHQYRLGLININDLKYTVARQMVQPREELTRWKKNEIHERALAMGENDPLKTDYSKYLPKRRTKLLSNVVPLDHGGYRNLLHYRMEVILKSAVKLQTSWRAKKGRRVARLAAEKQAFYHARGLALEEARQKIEKEWGERDAKPAHSVDKMKFEAKIRMKQVKLRTKGNAFTREQVLALMTEEAVQVAQKEVENRFREMEEELGY 1034          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: G4YXI1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YXI1_PHYSP)

HSP 1 Score: 155 bits (391), Expect = 2.230e-39
Identity = 91/234 (38.89%), Postives = 146/234 (62.39%), Query Frame = 1
Query:   34 IARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGF 729
            I  S  L ++ G  W + Q+S  +  +MS +H++ L +I++ DLK+ +AR++ + R  L +    ++H+RALAMG++DPLK DYS++L   + +  SN V L HG   NL H+R  V +++  ++Q  +R +  RQ A   A+KQAF  AR +A+E+ RQ +  E   R+A  A  V ++K++AK+RMKQ KLR  G    R+QV+  + EE+V+AAQ  V  RF E+ ++ G+
Sbjct:  708 IEGSKYLCELLGHPWKYQQLSRFVVQHMSAIHQYRLGLININDLKYALARQMTQPREELSQWKKAIIHERALAMGENDPLKTDYSKYLPRRQAKLLSNVVPLDHGGYRNLLHYRMEVILRSAVRLQTTWRARKGRQIARLAAEKQAFYHARGLALEEARQTVEREWSDRDAKPAHSVDKMKFEAKIRMKQVKLRTKGNAFSREQVLSLMTEEAVQAAQKEVENRFREMEEELGY 941          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A225WVV9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVV9_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.120e-39
Identity = 92/234 (39.32%), Postives = 143/234 (61.11%), Query Frame = 1
Query:   34 IARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGF 729
            I  S  L ++ G  W + Q+S  +  +M+ +H++ L +I++ DLK+ +AR+LI+ R  L      ++H+RALAMG++DPLK DYS++L   + +  S  V L HG   NL H+R  V +++  K+Q  +R K  RQ A   A+KQAF  AR +A+ED RQ +  E   R+A  A  V ++K++ K+RMKQ KLR  G    R+QV+  + EE+V+A Q  V  RF E+ ++ G+
Sbjct:  712 IEGSKYLCELLGHPWKYQQLSRFVVQHMNAIHQYRLGLINVNDLKYALARQLIQPREELSHWKKAIIHERALAMGENDPLKTDYSKYLPKRRAKLLSKVVPLDHGGYRNLLHYRMEVILRSAVKLQTSWRAKKGRQIARLAAEKQAFYHARGLALEDARQAVEMEWRDRDAKPAHSVDKMKFEGKIRMKQVKLRTKGNAFSREQVLALMTEEAVQATQKEVENRFREMEEELGY 945          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A5D6YCH9_9STRA (Clu domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCH9_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.490e-39
Identity = 94/244 (38.52%), Postives = 145/244 (59.43%), Query Frame = 1
Query:    4 LQVKGWMAGIIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGF 729
            L+ + +    +  S  L ++ G  W +  +S  +  +MS  H+F L +I++ DLK  VAR++++ R  L +    VVH+RALAMG++DPLK DYS++L   + +  SN V L HG   NL H R  V ++A  K+Q  +R +  RQ A   A+KQAF  AR +A+E+ R  + +E   R+A  A  V ++K++AK+RMKQ KLR  G    R+QV   + EE+V+ AQ  V  RF E+ ++ G+
Sbjct:  641 LEFEKYCVETVETSKYLCELLGHPWKYEHLSRFVVQHMSATHQFRLGLINLNDLKFAVARQMVQPRKELSRWKKNVVHERALAMGENDPLKTDYSKYLPKRRAKLLSNVVPLDHGGYRNLLHHRMEVILRATVKLQTTWRARKGRQVARLAAEKQAFYHARGVALEEARAAVESEWRARDARPAHSVEKMKFEAKIRMKQVKLRTKGNAFSREQVAALLTEEAVQLAQREVENRFREMEEELGY 884          
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Match: A0A329RIW9_9STRA (Clu domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RIW9_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.540e-38
Identity = 91/234 (38.89%), Postives = 144/234 (61.54%), Query Frame = 1
Query:   34 IARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGF 729
            I  S  L ++ G  W + Q+S  +  +MS + ++ L +I++ DLK+ +AR++ + R  L +    ++H+RA+AMG++DPLK DYS++L   + +  SN V L HG   NL H+R  V +++  K+Q  +R K  RQ A   A+KQAF  AR +A+++ RQRI  E   R+A  A  V ++K +AK+RMKQ KLR  G    R+QV+  + EE+V+ AQ  V  RF E+ ++ G+
Sbjct:  793 IEGSKYLCELLGLPWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTLARQMTQPREELSRWKKAIIHERAVAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVIVRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALDEARQRIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGNTFSREQVLALMTEEAVQIAQKEVENRFREMEEELGY 1026          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig588.16389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVD1_ECTSI6.110e-14195.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K633_9PHAE6.140e-11095.83Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2R5GJD7_9STRA7.800e-4741.13F-box/LRR-repeat protein 2 n=1 Tax=Hondaea ferment... [more]
A0A835YMZ6_9STRA5.020e-4440.24Clu domain-containing protein n=1 Tax=Tribonema mi... [more]
W2NLG0_PHYPR1.120e-4040.60Clu domain-containing protein n=10 Tax=Phytophthor... [more]
A0A662XGU1_9STRA1.530e-4039.15Clu domain-containing protein n=2 Tax=Nothophytoph... [more]
G4YXI1_PHYSP2.230e-3938.89Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225WVV9_9STRA4.120e-3939.32Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A5D6YCH9_9STRA4.490e-3938.52Clu domain-containing protein n=1 Tax=Pythium bras... [more]
A0A329RIW9_9STRA1.540e-3838.89Clu domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig588contigEcto-sp13_S_contig588:1079..2131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score441.8
Seed ortholog evalue2e-121
Seed eggNOG ortholog2880.D7FVD1
Model size738
KEGG koko:K10268
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.modulation by host of viral RNA genome replication
EggNOG OGsKOG4341@1,KOG4341@2759
Cds size717
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463817.0045962-CDS-Ecto-sp13_S_contig588:1078..12791681463817.0045962-CDS-Ecto-sp13_S_contig588:1078..1279Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig588 1079..1279 -
1681463817.02277-CDS-Ecto-sp13_S_contig588:1403..17661681463817.02277-CDS-Ecto-sp13_S_contig588:1403..1766Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig588 1404..1766 -
1681463817.0330153-CDS-Ecto-sp13_S_contig588:1957..21101681463817.0330153-CDS-Ecto-sp13_S_contig588:1957..2110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig588 1958..2110 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463817.0426996-UTR-Ecto-sp13_S_contig588:2110..21311681463817.0426996-UTR-Ecto-sp13_S_contig588:2110..2131Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig588 2111..2131 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig588.16389.1prot_Ecto-sp13_S_contig588.16389.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig588 1079..2110 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig588.16389.1

>prot_Ecto-sp13_S_contig588.16389.1 ID=prot_Ecto-sp13_S_contig588.16389.1|Name=mRNA_Ecto-sp13_S_contig588.16389.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp
MAGIIARSPKLSDIFGSSWSFGQMSTVMRSNMSMVHEFELSMISMVDLKH
KVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSEKKRSF
SNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAERMAKKQA
FLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAGE
NVDRQQVVEAIIEESVRAAQDGVMERFDEIAQDRGFDED
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mRNA from alignment at Ecto-sp13_S_contig588:1079..2131-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig588.16389.1 ID=mRNA_Ecto-sp13_S_contig588.16389.1|Name=mRNA_Ecto-sp13_S_contig588.16389.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig588:1079..2131- (Ectocarpus species13 EcNAP12_S_4_19m)
GCCCTACAGGTGAAAGGCTGGATGGCAGGGATAATCGCACGTTCACCAAA ACTGTCCGACATTTTCGGGTCGAGTTGGAGTTTCGGGCAAATGAGCACCG TCATGCGAAGCAATATGAGCATGGTGCATGAGTTCGAGCTCAGCATGATA AGCATGGTAGACCTAAAGCACAAGGTGAGGGATCAACCAAAGCCCATCGT AGTGGGGTGTCGGTGCTCATTAGGATTTGAAGCTCTCCTCGCGCTCCGAA CCCAGCTATCCCCGTCCATGTGTGACGTGAGGTTTCTACATGTAAATATG TTGTTGTATTCTACATCAGAGTCATTGACCCCATCAATCCCGCCAACTGG TACCTCTCTCTGCAGGTTGCGCGCAAGCTGATAAAGCATCGACCGTGCCT GCAAAAGGAAAACGTTCAAGTTGTGCACGATCGTGCATTGGCCATGGGCG ACGACGATCCCCTGAAACCGGACTACTCGCGCTTTTTGCATTCAGAGAAG AAGAGGTCATTCTCCAATGCGGTTTCCCTTCGCCACGGGCACCTTGAGAA CCTCTCCCATTGGCGAGACACCGTTCGAATCAAAGCGGTCACCAAGATAC AGAACTTGTTCCGTGGGAAGCTAGCGCGGCAAGCAGCAGAGAGGATGGCC AAGAAGCAAGCCTTTCTTTGCGCCCGAGCGATGGCGGTAGAGGATACTCG CCAACGCATCGCGGCCGAAATTTGGAAGGTAAATCTCCCTTGAATCCTGC ACCATTTGATCATCTCCCTGTATGCTACTCAACTCTTGTTTTCATATCGT TGCCGTCCTCAATATCTCCCCCTCCCTGGTCAATGAACTGTATGCAACGT AGCGAGAAGCGGCATCGGGTGTCGGGCGACTTAAATGGGATGCCAAGGTA CGCATGAAACAAGCCAAGCTTCGAGCGGCAGGGGAGAACGTGGACCGCCA ACAAGTGGTCGAAGCAATAATCGAGGAAAGCGTCCGAGCAGCGCAAGACG GTGTTATGGAACGTTTCGACGAAATCGCACAGGATCGTGGATTTGATGAG GAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig588:1079..2131-

>mRNA_Ecto-sp13_S_contig588.16389.1 ID=mRNA_Ecto-sp13_S_contig588.16389.1|Name=mRNA_Ecto-sp13_S_contig588.16389.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig588:1079..2131- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAGGGATAATCGCACGTTCACCAAAACTGTCCGACATTTTCGGGTC
GAGTTGGAGTTTCGGGCAAATGAGCACCGTCATGCGAAGCAATATGAGCA
TGGTGCATGAGTTCGAGCTCAGCATGATAAGCATGGTAGACCTAAAGCAC
AAGGTTGCGCGCAAGCTGATAAAGCATCGACCGTGCCTGCAAAAGGAAAA
CGTTCAAGTTGTGCACGATCGTGCATTGGCCATGGGCGACGACGATCCCC
TGAAACCGGACTACTCGCGCTTTTTGCATTCAGAGAAGAAGAGGTCATTC
TCCAATGCGGTTTCCCTTCGCCACGGGCACCTTGAGAACCTCTCCCATTG
GCGAGACACCGTTCGAATCAAAGCGGTCACCAAGATACAGAACTTGTTCC
GTGGGAAGCTAGCGCGGCAAGCAGCAGAGAGGATGGCCAAGAAGCAAGCC
TTTCTTTGCGCCCGAGCGATGGCGGTAGAGGATACTCGCCAACGCATCGC
GGCCGAAATTTGGAAGCGAGAAGCGGCATCGGGTGTCGGGCGACTTAAAT
GGGATGCCAAGGTACGCATGAAACAAGCCAAGCTTCGAGCGGCAGGGGAG
AACGTGGACCGCCAACAAGTGGTCGAAGCAATAATCGAGGAAAGCGTCCG
AGCAGCGCAAGACGGTGTTATGGAACGTTTCGACGAAATCGCACAGGATC
GTGGATTTGATGAGGAC
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