mRNA_Ecto-sp13_S_contig5873.16378.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5873.16378.1
Unique NamemRNA_Ecto-sp13_S_contig5873.16378.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5JL43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL43_9PHAE)

HSP 1 Score: 506 bits (1303), Expect = 5.340e-162
Identity = 268/322 (83.23%), Postives = 276/322 (85.71%), Query Frame = 3
Query: 2094 GVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAVSPGIPPGEAKRTIG 3059
            GVYQGF SVIDVVNFDLGS LAAGCLWSDLDF+DRLLVNTMGP                   AS  TALVAQIRHK+QTALLLLTFLVY SVSSTVFQTFA ETLDDGN YLRAD+RIHCTDAKHK FE YAGVMLAVYPVGIPLLYA+LLFRRRHVL DA  DKTV QSIS L EPYRSE FYYE+VECGRR MLTGVV+F FPDDAA  AIT+LIAFSFLIVFEILSPYESESDIWLSRGGHV+VFLS FDLLLLKVDVSGESDQSQ MFAGVLVAGHML ILAI AEVVGIWYASGKKRVVRA VSP I PGEAKRTIG
Sbjct:  470 GVYQGFWSVIDVVNFDLGSFLAAGCLWSDLDFHDRLLVNTMGP-------------------ASEATALVAQIRHKYQTALLLLTFLVYSSVSSTVFQTFACETLDDGNEYLRADFRIHCTDAKHKAFEVYAGVMLAVYPVGIPLLYAILLFRRRHVLVDAVTDKTVPQSISGLREPYRSEWFYYEVVECGRRVMLTGVVIFVFPDDAAHFAITMLIAFSFLIVFEILSPYESESDIWLSRGGHVIVFLSTFDLLLLKVDVSGESDQSQTMFAGVLVAGHMLPILAIFAEVVGIWYASGKKRVVRAGVSPEISPGEAKRTIG 772          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE)

HSP 1 Score: 497 bits (1280), Expect = 2.160e-158
Identity = 259/359 (72.14%), Postives = 289/359 (80.50%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAVSPGIPPGEAKRTIG*STCG*KFSRMMAAVHAARFSVGRAWT 3140
            FAD AN TYPG+YQ FLS IDV+NFD+GS+LA GCLW ++DF+DRLLVNT+GPLVVAG L M+Y I +RR SASG T  V +IRHKHQTALL LTFLVY SVSSTVFQTFA ETLDD   YLRADYRIHCTDAKHK FE YA +M+ VYPVGIPL YA LLF+  H+LADAGADKTVA SIS LWEPYR ERFYYE VECGRR  LTGVVVF FP+DAAQIAIT+LI   F ++FEILSPY SESD+WLSRGGHV+VFLS+FDL+LLKVDVSGESDQSQ +F+GVL+AGH+LMIL IV EVVGI YASG KRVV AA S    PG   R            R++A VHAA+FSV RA T
Sbjct:  403 FADTANVTYPGLYQDFLSAIDVINFDIGSVLAVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVLRRYSASGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILADAGADKTVALSISGLWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVEVVGICYASGMKRVVGAASSSESSPGLRPRPGSDDPAFESVPRIVAVVHAAKFSVRRART 761          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 1.220e-152
Identity = 253/325 (77.85%), Postives = 279/325 (85.85%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAVSPGIPPG 3038
            FAD AN TYPGVYQ FLS IDV+NFD+GS+LAAGCLWSD+DF+DRLLV T+GPLVV G L M+Y I +RR SASGDT  V +I HKHQTALLLLTFLVY SVSSTVFQTFA E LDD   YLRADYRIHCTDAKH+ F+ YA +M+ VYPVGIPLLYA LLF+RRHVLADAGADKTVA SIS LWEPYR ERFYYE+VECGRR MLTGVVVF FP+DAAQIAIT+L+   F  +FEILSPYESESD+WLSRGGHV+VFLSMFDLLLLKVDVS ESDQSQ +F+GVLVAGH+LMIL I+ EVVG+ YASGKKRVV AA SP   PG
Sbjct:  989 FADAANVTYPGVYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVTTIGPLVVVGFLAMTYGIVLRRHSASGDTGGVEKIYHKHQTALLLLTFLVYSSVSSTVFQTFACEILDDDVEYLRADYRIHCTDAKHQAFKVYAAIMIVVYPVGIPLLYAALLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLLTLFFSSLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSCESDQSQAVFSGVLVAGHVLMILVIIVEVVGMCYASGKKRVVGAASSPESSPG 1313          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 7.280e-148
Identity = 250/325 (76.92%), Postives = 279/325 (85.85%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAVSPGIPPG 3038
            FAD AN T+PG+YQ FLS IDV+NFD+GS+LAAGCLWSD+DF+DRLLVNT+GPLVVAG L M+Y I +RR SAS DT  + +I HKHQTALL LTF+VY SVSSTVFQTFA ETLDD   YLRADYRIHCTDAKHK F+ YA +M+ VYPVGIPLLYA+LLF+RRHVLADAGADKTVA SIS LWEPYR ERFYYE+VECGRR MLTGVVVF FP+DAAQIAIT+LI   F ++FEILSPYESESD+WLSRGGHV+VFLSMFDLLLLKVDVSGES+ SQ +F+ V VAGH+LMIL IV EVVGI YASGKKRVV AA S    PG
Sbjct: 1314 FADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGICYASGKKRVVGAASSSESSPG 1638          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 3.070e-144
Identity = 238/324 (73.46%), Postives = 268/324 (82.72%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAV-SPGIP 3032
            FADVAN TYP  YQ FLS IDVVNFDLGS LAAGCLW D+DF+DRLL+ T+GPLV  G LVM+YR+A+RR+  +G        RHKH +ALLLLTFL+Y SVSSTVFQTFA ETLDDG  YLR DY IHCTDAKHK FE YAG+M+ VYPVGIPLLYA+LLF+RR VL DA ADKTVAQ I+ LWEPYR ERFYYE++ECGRR MLTGVV F FP+DAAQIAIT+L+AF F +VFE++SPY SESD WLSRGGHV+VFLSMFD LLLKVDVS ES+QSQ +FAGV VAGH+L+ILAIV EVVGI  ASGKKR V  AV S G+P
Sbjct:  729 FADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLASGKKRGVEEAVPSEGLP 1052          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 7.320e-137
Identity = 230/317 (72.56%), Postives = 265/317 (83.60%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQ-IRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGAD-KTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVR 3008
            FAD AN +YPGVYQ FLS IDV+NFDLGSLLAAGC+WS++DF+ RLLV+T+GPL+V   L M+YRIAM RSS+  D    A+ IRHKHQ ALLLLTFLVY SVSSTVFQTFA ETLDDG  YLRADYRI+C DA H+ FE +AG M+ VYPVGIPLLYAVLLF+RR VLADAG D K  A+SIS LWEPYR ERFYYE+VECGRR MLTGVVVF FP+DAAQIAIT+L AF F  +FE++SPY+S+SD+WLSRGGHV+VF SMFDLLL KVDVS E ++SQ +FAGVLVAGH+LM+LAIV EVVGI Y S  +RV +
Sbjct:  714 FADAANVSYPGVYQDFLSAIDVINFDLGSLLAAGCVWSEIDFHHRLLVSTLGPLIVVAFLAMTYRIAMHRSSSRADHHSAAEKIRHKHQAALLLLTFLVYSSVSSTVFQTFACETLDDGVEYLRADYRINCKDAAHEAFEVFAGFMIFVYPVGIPLLYAVLLFQRRDVLADAGDDDKATAKSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLAIVVEVVGICYGSRGERVAK 1030          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5L4F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F7_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 2.850e-130
Identity = 255/456 (55.92%), Postives = 297/456 (65.13%), Query Frame = 3
Query: 1722 QCRCLHRGRNGGGQLLCLRIPGTILQRVRNRLFSIACSHLYTMLEFKTPRTHGRHGHRRDCGSLCG----CDNFSIYGVDGA*RRVCGALPSK-----------GTSSRSCPGIEDHRRRVANINPG*F-------------FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRS-SASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRV 3002
            Q  CL+RG NG G+LLCLRI GTI   +    F  +CS   +++    P T           SL      C +    G+  A      AL +             T       I   RRRV    P                FADVAN TYP VYQ FL  ID+VNFDLGS+L AGCLWSD+D + RLLV+ +GPL+V G L M+ R+A+RR+ SASG +A + +IRHKHQTALLL+TFL+Y SVSS VF TFA ETLDD   YLRAD RIH TDAKHK FE YAG+M+ VYPV IPLLYA LLF+ R VL   GADKT+AQ I+ LWE Y  ERFYYE   CGRR +LTG VVF FP+ A+QIAIT+LIAF F  VF++LSPY S SD WLSRGGHV+VFLSMFD LLLKVDVSG+ DQSQ  FAGVLVAGH+LMILAIV EV  + YAS +KRV
Sbjct:  473 QYGCLYRGANGLGKLLCLRIHGTIGHTLATVSFLPSCSLCRSVVFVPVPLTDCAVCETDYSPSLAHTCTRCSSSRRQGLVAA--TAIAALVAVFAVATFFKFLLSTEVEEGGNIGRFRRRVLRAVPVQALKIVVVVWQILTQFADVANVTYPSVYQDFLGAIDLVNFDLGSVLVAGCLWSDIDVHGRLLVSNIGPLIVVGFLTMTDRVAVRRNRSASGASAALEKIRHKHQTALLLVTFLLYSSVSSMVFSTFACETLDDDIEYLRADDRIHYTDAKHKAFEVYAGIMVFVYPVDIPLLYAALLFQHRDVLTRVGADKTLAQPIAGLWEAYSPERFYYE---CGRRILLTGGVVFIFPNTASQIAITMLIAFFFFAVFDVLSPYTSASDTWLSRGGHVIVFLSMFDFLLLKVDVSGDRDQSQAAFAGVLVAGHVLMILAIVVEVAALCYASRRKRV 923          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 6.180e-125
Identity = 213/314 (67.83%), Postives = 253/314 (80.57%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDLDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVV 3005
            FA  AN TYP VYQ FLS IDV+N DLGS+++AGCLWS +DF+DRLLV+T+ PL+  G L  +Y +A+RR++ +G  A++  IRHKH T LL +TFLVY SVSS VFQTFA ++LDDGN YLRADYRI CT +KH   + YAGVM+ VYPVGIPLLYA+LLF+ R +LA+A ADK  AQ I+SLWE Y+ ERFYYE++ECGRR MLTGVVVF +P+DAAQIAITILIA  F  VF+ILSPY SE D+WLSRGG V+VFLSMFDLLLLKVDVS E  QSQ  +AGVLVAGH+LM LAI AEVVGI YAS + RV+
Sbjct:  711 FAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGH-AIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKAGAQPIASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVVGICYASRRNRVM 1023          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 9.920e-119
Identity = 207/336 (61.61%), Postives = 259/336 (77.08%), Query Frame = 3
Query: 2064 FADVANATYPGVYQGFLSVIDVVNFDLGSLLAAGCLWSDL--DFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSAS--GDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAVSPGIPPGEAKRTIG 3059
            FA  AN ++P VYQ F++ +DVVNFDLGSL+A+GC W+D+  DF+DRLLV+T+GPL+V G L  +Y +A RR+S++  G  A V  IRHKH +A LL+TFLVY SVS+TVFQ FA + LDDG+ YLRADYRI CT AKH+  + YA  M+A+YPVGIPLLYA LL  RR VL D  ADK  AQS + LWEPYR ERFYYE++ECGRR +LTGVVVF +P+ AAQ+A+TILIAF FL+V+E+L+PY S+SD+WLSRGGHV+VFLSMFD+LLLKVDVS E  +SQ +FAGV+VAGH LM LA++ E VG+ YAS K + V     P      ++RT G
Sbjct:  825 FASAANISFPDVYQDFINALDVVNFDLGSLVASGC-WADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYASSKGQPVSEHSVP------SRRTFG 1153          
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Match: A0A6H5K0D5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D5_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 9.660e-101
Identity = 184/289 (63.67%), Postives = 208/289 (71.97%), Query Frame = 3
Query: 2181 LDFYDRLLVNTMGPLVVAGSLVMSYRIAMRRSSASGDTALVAQIRHKHQTALLLLTFLVYFSVSSTVFQTFARETLDDGNVYLRADYRIHCTDAKHKTFEFYAGVMLAVYPVGIPLLYAVLLFRRRHVLADAGADKTVAQSISSLWEPYRSERFYYEIVECGRRAMLTGVVVFFFPDDAAQIAITILIAFSFLIVFEILSPYESESDIWLSRGGHVMVFLSMFDLLLLKVDVSGESDQSQVMFAGVLVAGHMLMILAIVAEVVGIWYASGKKRVVRAAVS----PGIPP 3035
            +DF+DRL V+T+GPLVVAG L M+  IAM R+S SGD A   +IRHKHQTAL LLTFLV                                       FE YA +M+ V+PVGIPL YA LL +RRHVLADAG DKTVAQSISSLW PYRSERFY+E++ECGRR MLTGVVVF FP+DAAQIAIT+LIA SFLIVFE+LSPY SE D+ LSRG HV+V LSMFDLLLLKVDVSGES+QSQ  FA VLVAGH+LMILAI+ EVVG+  ASG KRVV AA S    PG+ P
Sbjct:    1 MDFHDRLFVSTVGPLVVAGFLAMTCWIAMHRNSESGDIAAAEKIRHKHQTALPLLTFLV---------------------------------------FEVYAAIMIVVHPVGIPLAYAALLCQRRHVLADAGTDKTVAQSISSLWAPYRSERFYFEVIECGRRVMLTGVVVFIFPNDAAQIAITMLIALSFLIVFEMLSPYTSEPDMCLSRGDHVIVPLSMFDLLLLKVDVSGESEQSQTAFAAVLVAGHVLMILAIIVEVVGVCCASGTKRVVGAAASTENVPGLTP 250          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5873.16378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL43_9PHAE5.340e-16283.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LAD4_9PHAE2.160e-15872.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1E0_ECTSI1.220e-15277.85EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D7G3S0_ECTSI7.280e-14876.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7J9_9PHAE3.070e-14473.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX12_9PHAE7.320e-13772.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4F7_9PHAE2.850e-13055.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI6.180e-12567.83Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5JWT9_9PHAE9.920e-11961.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0D5_9PHAE9.660e-10163.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5873contigEcto-sp13_S_contig5873:1036..5338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score206.5
Seed ortholog evalue3.7e-50
Seed eggNOG ortholog2880.D8LHQ8
Model size3165
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2BFIX@1,2S176@2759
Cds size1881
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5873.16378.1prot_Ecto-sp13_S_contig5873.16378.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5873 2086..5104 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463816.38324-UTR-Ecto-sp13_S_contig5873:1035..20851681463816.38324-UTR-Ecto-sp13_S_contig5873:1035..2085Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5873 1036..2085 -
1681463816.4696026-UTR-Ecto-sp13_S_contig5873:5104..53381681463816.4696026-UTR-Ecto-sp13_S_contig5873:5104..5338Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5873 5105..5338 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463816.3977861-CDS-Ecto-sp13_S_contig5873:2085..21371681463816.3977861-CDS-Ecto-sp13_S_contig5873:2085..2137Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 2086..2137 -
1681463816.4074366-CDS-Ecto-sp13_S_contig5873:2329..26001681463816.4074366-CDS-Ecto-sp13_S_contig5873:2329..2600Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 2330..2600 -
1681463816.4188435-CDS-Ecto-sp13_S_contig5873:2742..30311681463816.4188435-CDS-Ecto-sp13_S_contig5873:2742..3031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 2743..3031 -
1681463816.4316065-CDS-Ecto-sp13_S_contig5873:3307..34861681463816.4316065-CDS-Ecto-sp13_S_contig5873:3307..3486Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 3308..3486 -
1681463816.4416983-CDS-Ecto-sp13_S_contig5873:3630..38251681463816.4416983-CDS-Ecto-sp13_S_contig5873:3630..3825Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 3631..3825 -
1681463816.4502027-CDS-Ecto-sp13_S_contig5873:3951..43201681463816.4502027-CDS-Ecto-sp13_S_contig5873:3951..4320Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 3952..4320 -
1681463816.4595876-CDS-Ecto-sp13_S_contig5873:4578..51041681463816.4595876-CDS-Ecto-sp13_S_contig5873:4578..5104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5873 4579..5104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5873.16378.1

>prot_Ecto-sp13_S_contig5873.16378.1 ID=prot_Ecto-sp13_S_contig5873.16378.1|Name=mRNA_Ecto-sp13_S_contig5873.16378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=627bp
MTLSNGNASFGGAIFANQSSVSFFGTISFSSNSAYNGGAIVASDSTVSWD
GDGTLFSNNSAGEYGGAIEIYSTLSWNGDGTLFSSNSAEYGGAINAYAST
VSWHGDGTRFSSNHANGFGGAILASPSSTVSWDGEGTQFSSNSADYGGAI
VASYSILSWNGDGAEFSNNSASEYGGAIHVDASSTVSWNGDATHFSNNSA
GEDGGAISADGSVVSWDGNRTQFSSNYAGNDGGAVRAYPDSILSWNGQGT
QFSSNYANGDGGAILAWDAIVSLDRNTTFSNNVVGGNGGGIAFIDLGQHL
SFQNNRASYAGGAVAAYDIGRIWPMTFSRCAFLDNVASVAGGVVDIVSGF
QEFISCDFEGNSADVGGALKLGGSADVIESFFLSNVAYTRGLAVAVVDSA
SFSSSSFVGNQLSCAAGSYRSDTEESNARFEMVCFDCPDWEECSGCSIES
GDVAPTCVVPLEHTSADKLGVTLETLSIDEGFWRATNDSAIILACFNADA
CTGGETGADSFCASGYQGPYCNVCETGYSPSLAHTCTQCSSSRRHGLMAA
TVIAAIVAAFAVVTIFQYMVSTELEDAFVARCHRRVLRAVPVQALKIIVV
VWQILTQADFSLTWPMPPILACTKAF*
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mRNA from alignment at Ecto-sp13_S_contig5873:1036..5338-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5873.16378.1 ID=mRNA_Ecto-sp13_S_contig5873.16378.1|Name=mRNA_Ecto-sp13_S_contig5873.16378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4303bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5873:1036..5338- (Ectocarpus species13 EcNAP12_S_4_19m)
CCAACTACCGTCGAGAGCACCGCAGACGCGGCTAGCTTGGCAACTTCCAT TCTATGTTCGAATGGTGACTTCATCGTGCGGTGGGTTGGCGCAGTATCGG TCGCAGAAACAATTCGTGTCACCAACGGCACAACGCTCAACGTCACTGGC GCTGGACCGGGCGCAATCGCGGACGGCCGTGGCAGCACGCAACTCTTCGT TGTGGATGGAGACTCAAACCTGAACCTCTCGAACATGACTTTGAGCAACG GCAACGCTTCATTTGGTGGTGCTATCTTTGCGAACCAATCGAGTGTCTCG TTTTTCGGAACAATATCATTCAGCTCTAACTCCGCGTACAATGGGGGTGC AATTGTCGCGAGTGATTCGACCGTATCCTGGGACGGCGACGGAACCCTGT TCAGCAACAACTCCGCCGGCGAATATGGAGGTGCAATTGAGATTTATTCG ACCTTGTCATGGAATGGCGACGGCACCCTGTTCAGCTCCAATTCCGCGGA ATATGGAGGCGCAATCAACGCGTATGCATCGACCGTGTCTTGGCATGGCG ATGGAACCCGATTCAGCTCGAACCATGCTAACGGATTTGGAGGTGCAATC CTCGCATCGCCTAGTTCGACCGTGTCCTGGGATGGCGAAGGCACCCAGTT CAGCTCCAACTCCGCGGATTATGGGGGTGCAATTGTCGCGAGTTATTCGA TCCTGTCCTGGAATGGCGACGGAGCCGAGTTCAGCAACAACTCCGCCAGC GAATATGGAGGTGCAATTGACGCGAGGTATTCCACCGTTTCATGGGATGG CGACGGCACCCAGTTCAGCTCAAACTCAGCGGATTTTGGAGGCACATTCA ACGCGTATGAATCTACCGTGTCTTGGGATGGCGGCGGAACCCAATTCAGC TCCAGTTCCGCGGACTACGGAAGAGGCTACGGAGGGGCAATCGTCGCATC GGCTAATTCGACCGTATCATGGAATGGGGACGGCACCCAGTTTAGCTCCA ACTCCGCTGGGTTTGGAGGCGCAATCCACGTGGACGCTAGCTCGACCGTG TCATGGAATGGTGACGCAACCCATTTCAGCAACAACTCCGCCGGTGAAGA TGGAGGCGCAATCAGCGCAGATGGTTCGGTCGTCTCCTGGGATGGCAACC GAACGCAGTTTAGCTCCAACTACGCTGGCAACGATGGAGGTGCCGTCCGC GCATATCCTGATTCGATTCTTTCCTGGAATGGCCAGGGAACCCAGTTCAG CTCCAATTACGCTAACGGCGATGGTGGTGCAATCCTAGCGTGGGATGCGA TCGTCTCCTTGGATCGGAACACGACCTTCAGCAACAACGTCGTGGGGGGG AACGGCGGCGGGATAGCTTTTATTGACTTGGGACAGCGTTAATATGTTCT CGAGAGTGAAATATCCACGCTCTACTTTTCTGCCGCCGCATTTGTCAACA ACAGTGCAACCAATGCGGGGGCTTTATTCTTGTCGAACTCGGACTACGAC TTCAACTTCACAGACCTTTCATTTCAAAATAACCGGGCTAGTTATGCCGG TGGGGCGGTGGCGGCGTACGACATCGGGCGGATCTGGCCAATGACGTTTT CGAGGTGTGCTTTCTTGGACAACGTGGCAAGCGTAGCCGGAGGGGTAGTT GACATCGTGTCTGGATTCCAAGAATTCATTTCCTGTGATTTTGAGGGTAA CTCAGCAGGTGAGAGACGAACCATTCCACGGGTACTCCTTTTCTGACTAG CCATACTTGCTTTATTTGATGGCAGGTGCACTACCACCGTTGAACTTCTC TTCGAATCGTATTTCCTGAGCGTATACGAATCCCTTCGAATCATATTTCC AGATGTCGGTGGAGCTTTGAAACTCGGAGGTTCAGCGGATGTCATCGAGA GTTTCTTCCTCTCCAACGTGGCTTACACCCGTGGACTCGCCGTTGCTGTG GTGGATTCTGCGAGTTTTAGCAGCTCATCGTTCGTCGGGAACCAACTGTC GTGCGCTGCTGGCTCGTATCGAAGCGATACCGTGAAGGTAAAACGGGACG GCTTTTGTAGCTTAGTCGCTATACCGCTCGCCGGTGGCGCGCGATTGTGT TTGCGTTGGTGGCGACGCATGCCGATCTACTCCTGAACCAACCTAAGGCT TCTGCTTCATGTATCCACGCTATCAACAAGAGGTTGGTATTTTGCGAATA CCTGGAACCACCTTTTTCAAATACTCAAGTTGTTTTAAGCGAAATCGCTT CAAGGTTGAGAAGGTACTCAATCAAACTGCTTCGATGGTTCCCTCTTGAC AAAGCAGGAAGAATCCAATGCACGCTTTGAGATGGTGTGCTTCGACTGTC CTGATTGGGAAGAGTGCTCCGGCTGCTCCATCGAAAGCGGTGACGTCGCG CCGACATGCGTGGTGCCATTAGAGCACACTTCAGCCGACAAACTTGGCGT GACGTTGGAAACACTCAGTATTGATGAAGGCTTCTGGCGCGCGACCAACG ATAGCGCCATCATCCTGGCGTGCTTCAATGCAGATGCCTGCACAGGGGGA GAAACGGGGGCGGACAGCTTTTGTGCCTCAGGATACCAGGGACCATGTGA GCTGGGGGTGGGGAAGATTACAACACATGAGTTTGCCTCTGACATTTTCG GAAGGCGTGAGAGTTCTCGCTCGCATCCACTCGTTTCTGAACCCGTATCC TTGGTATCCCCGTCGTGTGCCTATTTCTACCGTTGCAGATTGCAACGTGT GCGAAACCGGTTATTCTCCATCGCTTGCTCACACTTGTACACAATGCTCG AGTTCAAGACGCCACGGACTCATGGCCGCCACGGTCATCGCCGCGATTGT GGCAGCCTTTGCGGTTGTGACAATTTTTCAATATATGGTGTCGACGGAGC TTGAAGACGCGTTTGTGGCGCGCTGCCATCGAAGGGTACTTCGAGCCGTT CCTGTCCAGGCATTGAAGATCATCGTCGTCGTGTGGCAAATATTAACCCA GGCTGATTTGTGTTGGGAACATTCCAGTATCGAGCCCGGAAGCTTAGCAC AGAACTCTAATCATAAGGGCGGGTACACAGACTTCAGACAGTGCGCCAAA GGCAGGAAACAGTACACTGGCAGAAGGCCATGAAAGTTTTTCGTGGGCCT GGCCGCCATGTTCTAACCCCATCTGTATGAAAACGCAATCGTTCCGCACA GTTCGCTGACGTGGCCAATGCCACCTATCCTGGCGTGTACCAAGGCTTTT TGAGCGTCATCGACGTAGTCAACTTCGACCTTGGTTCCTTACTGGCGGCC GGGTGCTTGTGGTCCGACTTGGACTTCTACGACCGACTTCTTGTCAACAC TATGGGGCCGTTGGTTGTTGCTGGATCATTGGTGATGTCGTACCGGATCG CGATGCGAAGAAGTAGCGCATCTGGAGACACTGCTCTTGTAGCGCAAATC CGCCACAAACATCAGACGGCTCTCCTACTCTTGACATTCCTGGTGTATTT CTCGGTATCGTCAACGGTGTTCCAAACTTTCGCCCGTGAGACCCTTGACG ACGGAAATGTGTACCTCCGGGCGGATTACCGTATCCATTGCACGGATGCC AAACACAAGACCTTTGAATTTTATGCAGGGGTCATGCTTGCTGTGTACCC GGTGGGTATCCCCCTGCTATACGCCGTCCTGTTGTTTCGACGTCGCCACG TTCTGGCCGACGCTGGTGCCGACAAGACAGTAGCTCAGTCAATTTCCAGT CTTTGGGAGCCGTACAGGTCCGAGCGGTTCTACTACGAGATAGTCGAGTG CGGGCGCCGTGCAATGCTGACGGGTGTGGTTGTCTTTTTCTTTCCGGATG ATGCAGCCCAGATCGCGATCACCATACTCATAGCCTTCTCTTTCTTAATC GTTTTCGAAATTTTGTCGCCGTACGAGTCTGAGTCCGACATATGGCTTTC TCGGGGGGGTCATGTTATGGTGTTCCTCAGCATGTTCGACTTGTTGCTGT TGAAGGTGGATGTGTCCGGCGAGAGCGACCAGAGCCAGGTCATGTTTGCG GGGGTGTTGGTAGCAGGGCACATGTTGATGATTCTTGCCATCGTTGCCGA GGTGGTTGGCATCTGGTACGCTTCGGGGAAGAAGCGAGTTGTCAGAGCAG CGGTGTCACCCGGGATTCCTCCGGGTGAGGCGAAGCGCACGATAGGATGA AGCACCTGCGGTTGAAAGTTCTCCCGCATGATGGCGGCCGTTCATGCGGC AAGGTTCAGTGTGGGGAGAGCCTGGACCACCGCGCATCTCTGCGACCATA TTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5873:1036..5338-

>mRNA_Ecto-sp13_S_contig5873.16378.1 ID=mRNA_Ecto-sp13_S_contig5873.16378.1|Name=mRNA_Ecto-sp13_S_contig5873.16378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1881bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5873:1036..5338- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACTTTGAGCAACGGCAACGCTTCATTTGGTGGTGCTATCTTTGCGAA
CCAATCGAGTGTCTCGTTTTTCGGAACAATATCATTCAGCTCTAACTCCG
CGTACAATGGGGGTGCAATTGTCGCGAGTGATTCGACCGTATCCTGGGAC
GGCGACGGAACCCTGTTCAGCAACAACTCCGCCGGCGAATATGGAGGTGC
AATTGAGATTTATTCGACCTTGTCATGGAATGGCGACGGCACCCTGTTCA
GCTCCAATTCCGCGGAATATGGAGGCGCAATCAACGCGTATGCATCGACC
GTGTCTTGGCATGGCGATGGAACCCGATTCAGCTCGAACCATGCTAACGG
ATTTGGAGGTGCAATCCTCGCATCGCCTAGTTCGACCGTGTCCTGGGATG
GCGAAGGCACCCAGTTCAGCTCCAACTCCGCGGATTATGGGGGTGCAATT
GTCGCGAGTTATTCGATCCTGTCCTGGAATGGCGACGGAGCCGAGTTCAG
CAACAACTCCGCCAGCGAATATGGAGGCGCAATCCACGTGGACGCTAGCT
CGACCGTGTCATGGAATGGTGACGCAACCCATTTCAGCAACAACTCCGCC
GGTGAAGATGGAGGCGCAATCAGCGCAGATGGTTCGGTCGTCTCCTGGGA
TGGCAACCGAACGCAGTTTAGCTCCAACTACGCTGGCAACGATGGAGGTG
CCGTCCGCGCATATCCTGATTCGATTCTTTCCTGGAATGGCCAGGGAACC
CAGTTCAGCTCCAATTACGCTAACGGCGATGGTGGTGCAATCCTAGCGTG
GGATGCGATCGTCTCCTTGGATCGGAACACGACCTTCAGCAACAACGTCG
TGGGGGGGAACGGCGGCGGGATAGCTTTTATTGACTTGGGACAGCACCTT
TCATTTCAAAATAACCGGGCTAGTTATGCCGGTGGGGCGGTGGCGGCGTA
CGACATCGGGCGGATCTGGCCAATGACGTTTTCGAGGTGTGCTTTCTTGG
ACAACGTGGCAAGCGTAGCCGGAGGGGTAGTTGACATCGTGTCTGGATTC
CAAGAATTCATTTCCTGTGATTTTGAGGGTAACTCAGCAGATGTCGGTGG
AGCTTTGAAACTCGGAGGTTCAGCGGATGTCATCGAGAGTTTCTTCCTCT
CCAACGTGGCTTACACCCGTGGACTCGCCGTTGCTGTGGTGGATTCTGCG
AGTTTTAGCAGCTCATCGTTCGTCGGGAACCAACTGTCGTGCGCTGCTGG
CTCGTATCGAAGCGATACCGAAGAATCCAATGCACGCTTTGAGATGGTGT
GCTTCGACTGTCCTGATTGGGAAGAGTGCTCCGGCTGCTCCATCGAAAGC
GGTGACGTCGCGCCGACATGCGTGGTGCCATTAGAGCACACTTCAGCCGA
CAAACTTGGCGTGACGTTGGAAACACTCAGTATTGATGAAGGCTTCTGGC
GCGCGACCAACGATAGCGCCATCATCCTGGCGTGCTTCAATGCAGATGCC
TGCACAGGGGGAGAAACGGGGGCGGACAGCTTTTGTGCCTCAGGATACCA
GGGACCATATTGCAACGTGTGCGAAACCGGTTATTCTCCATCGCTTGCTC
ACACTTGTACACAATGCTCGAGTTCAAGACGCCACGGACTCATGGCCGCC
ACGGTCATCGCCGCGATTGTGGCAGCCTTTGCGGTTGTGACAATTTTTCA
ATATATGGTGTCGACGGAGCTTGAAGACGCGTTTGTGGCGCGCTGCCATC
GAAGGGTACTTCGAGCCGTTCCTGTCCAGGCATTGAAGATCATCGTCGTC
GTGTGGCAAATATTAACCCAGGCTGATTTTTCGCTGACGTGGCCAATGCC
ACCTATCCTGGCGTGTACCAAGGCTTTTTGA
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