mRNA_Ecto-sp13_S_contig5860.16354.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: D7G562_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G562_ECTSI) HSP 1 Score: 238 bits (607), Expect = 1.520e-71 Identity = 122/147 (82.99%), Postives = 124/147 (84.35%), Query Frame = 1
Query: 7 GPCPASQHHLVNVVAGRDIHVTYDFTGPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGIA 447
G CPA VA RDIHV YDFTGPVLGKGS+ATVLRVRDRVSGSEYAVKQIDL AIKDSPSS RMIERECRTMMTL HPNIVRLQE YRPP DRLYM LDRLEGG VDGL RR GQL DDH AHIILQIVSA+RYCHDRGIA
Sbjct: 81 GACPA--------VADRDIHVAYDFTGPVLGKGSFATVLRVRDRVSGSEYAVKQIDLHAIKDSPSSLRMIERECRTMMTLSHPNIVRLQEVYRPPSADRLYMVLDRLEGGSVDGLWRRVGQLSDDHAAHIILQIVSAVRYCHDRGIA 219
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A6H5KUQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ0_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.150e-41 Identity = 77/136 (56.62%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 37 VNVVAGRDIHVTYDFTGPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
V V D+H YDFTGPVLG G++ATVLRVRD +SG EYAVKQIDL IKD PS+ RM+ E + M L HPNIVRLQE Y+P D +Y+ LDRL GG V+ L R+ G L ++ A+I+ Q+V A+RYCH I
Sbjct: 33 VREVLDEDVHEMYDFTGPVLGSGAFATVLRVRDHMSGVEYAVKQIDLSGIKDDPSTMRMLYNEIKGMKALNHPNIVRLQEVYQPKDEDMMYLVLDRLSGGSVEALRRQKGHLEENFAAYIVAQVVDAVRYCHSLNI 168
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A835YS30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS30_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.670e-25 Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 73 YDFTGPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
YDF+GPVLGKG YA+V+ V+ + +G+ YA+KQID+ S + +++ E +M L+HPNIVRLQE Y+ +Y+ +DRLEGG V L +DH A+I +V+AIRYCHDR +
Sbjct: 55 YDFSGPVLGKGGYASVMMVKHKTTGALYAMKQIDITDF--SELALHLLQNEIESMKHLVHPNIVRLQEVYQTVDLKHVYLIMDRLEGGTVREKWAELDGLEEDHAAYIASGVVAAIRYCHDRNV 176
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A2V0PL63_9CHLO (Calcium-dependent kinase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PL63_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 9.660e-14 Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = 1
Query: 10 PCPASQHHLVNVVAGRDIHVTYDFTGPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLL-HPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRG 441
P P H L+ + D+ YD +GPVLG+G++AT +R SG+ YA K + Q ++ + RE + M L HPNI RL EA+ ++M +D GGG+ G+ + A ++ ++ A+ Y HD G
Sbjct: 31 PPPKLSHSLLGITHATDVTAKYDVSGPVLGRGAFATTRVCVERASGARYACKTVYKQRLEGLSQEWADVRREVQVMHHLGDHPNIARLVEAFEDE--GSVHMVVDLCSGGGLLDRVMARGRFPEREAAALVRSLLRAVAYAHDLG 173
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A843X544_COLES (Non-specific serine/threonine protein kinase n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843X544_COLES) HSP 1 Score: 76.3 bits (186), Expect = 2.320e-13 Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 1
Query: 85 GPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGIA 447
G +LGKG++A V + VSG A+K +D + +K P I RE M + HPN+V L+E R+Y ++ + GG + L R G L +D Q+VSA+ +CH RG++
Sbjct: 28 GRLLGKGTFAKVYHAKHLVSGEGVAIKVVDKEQVKRVPGMAAQIVREISVMRLVRHPNVVELREVMATR--SRVYFVMEHVRGGELFALVER-GPLDEDQARRYFQQLVSAVDFCHSRGVS 145
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A0G4F6L7_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F6L7_VITBC) HSP 1 Score: 73.9 bits (180), Expect = 1.580e-12 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 73 YDFTGPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
Y+ T LGKGSY +V + RDR +G+ AVK I I++ ++RE M L HPNI++L E + + +Y+ L+ GG + ++G + H A ++ Q++SAI YCH+ GI
Sbjct: 150 YELTSEQLGKGSYGSVQKARDRRTGAVRAVKIIKKSRIENITR----LKREITIMKKLDHPNIIKLFEVFEDD--EHIYLVLELCTGGELFARIIKSGHFSEYHSAVVMKQVLSAIWYCHENGI 267
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: K7MEN6_SOYBN (Protein kinase domain-containing protein n=12 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7MEN6_SOYBN) HSP 1 Score: 73.9 bits (180), Expect = 1.620e-12 Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 85 GPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
GP +G GS+A V R R+R SG EYAVK+ID + + SP + +E + T+ HPNI+RL EA + DR+Y+ L+ GG + R G++ + H + Q+ + ++ ++ +
Sbjct: 20 GPRIGSGSFAVVWRARNRSSGLEYAVKEIDKRQL--SPKVRENLLKEISILSTIHHPNIIRLFEAIQT--NDRIYLVLEYCAGGDLAAYIHRHGKVSEPVARHFMRQLAAGLQVLQEKNL 135
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A087FYB9_ARAAL (Non-specific serine/threonine protein kinase n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087FYB9_ARAAL) HSP 1 Score: 73.2 bits (178), Expect = 2.630e-12 Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 85 GPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
G +LG G++A V RDR SG AVK ++ + + +P+ I+RE M L HPNIV+L E +++ ++ ++GG + + G+L +D Q++SA+ YCH RG+
Sbjct: 20 GKLLGCGAFAKVFHARDRRSGQSVAVKVLNKKKLLANPNLANNIKREISIMRRLSHPNIVKLHEVMATKA--KIFFAMEFVKGGELFNKISKHGRLTEDLCVRYFQQLISAVGYCHARGV 137
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: UPI00053CA8CC (CBL-interacting serine/threonine-protein kinase 11-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA8CC) HSP 1 Score: 73.2 bits (178), Expect = 2.670e-12 Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = 1
Query: 85 GPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
G +LG G++A V RDR SG AVK ++ + + +P+ I+RE M L HPNIVRL+E +++ ++ ++GG + + G+L +D Q++SA+ YCH RG+
Sbjct: 24 GKLLGCGAFAKVFHGRDRRSGQSVAVKILNKKKLAANPNLASNIKREISIMRRLNHPNIVRLREVMATK--SKIFFVMEFVKGGELFNKIAKLGRLSEDLSRKFFQQLISAVGYCHARGV 141
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Match: A0A6D2JMM1_9BRAS (Non-specific serine/threonine protein kinase n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JMM1_9BRAS) HSP 1 Score: 73.2 bits (178), Expect = 2.690e-12 Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 85 GPVLGKGSYATVLRVRDRVSGSEYAVKQIDLQAIKDSPSSPRMIERECRTMMTLLHPNIVRLQEAYRPPLGDRLYMDLDRLEGGGVDGL*RRAGQLGDDHVAHIILQIVSAIRYCHDRGI 444
G +LG G++A V RDR +G AVK ++ + + +P+ I+RE M L HPNIVRL E +++ ++ ++GG + + G+L +D Q++SA+ YCH RG+
Sbjct: 26 GKLLGCGAFAKVFHARDRRTGQSVAVKILNKKKLLANPALANNIKREISIMRRLAHPNIVRLHEVMATKA--KIFFAMEFVKGGELFNKISKYGRLSEDLSRRYFQQLISAVGYCHARGV 143 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5860.16354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5860.16354.1 >prot_Ecto-sp13_S_contig5860.16354.1 ID=prot_Ecto-sp13_S_contig5860.16354.1|Name=mRNA_Ecto-sp13_S_contig5860.16354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp STGPCPASQHHLVNVVAGRDIHVTYDFTGPVLGKGSYATVLRVRDRVSGSback to top mRNA from alignment at Ecto-sp13_S_contig5860:151..2701- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5860.16354.1 ID=mRNA_Ecto-sp13_S_contig5860.16354.1|Name=mRNA_Ecto-sp13_S_contig5860.16354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2551bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5860:151..2701- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5860:151..2701- >mRNA_Ecto-sp13_S_contig5860.16354.1 ID=mRNA_Ecto-sp13_S_contig5860.16354.1|Name=mRNA_Ecto-sp13_S_contig5860.16354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=354bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5860:151..2701- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |