mRNA_Ecto-sp13_S_contig5833.16308.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A6H5KNC7_9PHAE (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC7_9PHAE) HSP 1 Score: 283 bits (724), Expect = 4.210e-87 Identity = 157/170 (92.35%), Postives = 160/170 (94.12%), Query Frame = 1
Query: 184 VKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQALSKKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVKRISELEAELARSTAASELKVRALRQEHERVKNGLQRQLETRVGGA 693
VKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDL+DGNLDRMREQEEELGRLRQ LSKKGKG G RNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELR DGNVKRI+ELEAELARSTAASELK+RALRQEHERVKNGLQRQLETRVGGA
Sbjct: 37 VKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLVDGNLDRMREQEEELGRLRQELSKKGKGSGTGPGGPGRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRKDGNVKRIAELEAELARSTAASELKLRALRQEHERVKNGLQRQLETRVGGA 206
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: D8LRE4_ECTSI (Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE4_ECTSI) HSP 1 Score: 214 bits (544), Expect = 1.800e-62 Identity = 148/177 (83.62%), Postives = 149/177 (84.18%), Query Frame = 1
Query: 310 MREQEEELGRLRQALSKKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVKRISELEAELARSTAASELKVRALRQEHERVKNGLQRQLETRVGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFWRPGVAASGDGGGRSSQ 840
MREQEEELGRLRQALSKKGKG G RNPAD RKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVKRI ELEAELARSTAASELK+RALRQEHERVKNGLQRQLETRVGGAA XXXXXXXXXXXXXXXXXX V RPGVA G GGRS Q
Sbjct: 1 MREQEEELGRLRQALSKKGKGAGDGAGGSGRNPADTRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVKRIGELEAELARSTAASELKLRALRQEHERVKNGLQRQLETRVGGAAAAAXXXXXXXXXXXXXXXXXX--------VCGRPGVATGGGSGGRSPQ 169
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A835YRL9_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL9_9STRA) HSP 1 Score: 114 bits (285), Expect = 8.110e-25 Identity = 92/208 (44.23%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 58 LMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQALSKKGKGGG---AXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVKRISELEAELARSTAASELKVRALRQEHERVKNGLQRQL 672
L E+DKLR +AKA A G DA + +VK + E AE+ + +L WY ENQD+LD +Q EE RL++AL + GKG G A R PAD +LE QL E+ EA+RRR+PD LASLIRAA+PT S ELR +R+ EL+AEL R A +ELK+R+LRQ+HERV GL+R+L
Sbjct: 940 LRHELDKLRA-----QAKAAMLRAE----GIDATALQGSDAQVKAVTAAADAEKRRHAEEMAQLQRRLQWYIENQDILD-------QQAEENRRLKEALKQGGKGQGSSNAAGHSKGRAPAD-----ELEGQLREMEEAVRRRNPDCLASLIRAAKPTQSVELRAADQDQRVQELQAELERVKADTELKLRSLRQQHERVCAGLERRL 1126
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A7S3PRE1_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRE1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.840e-16 Identity = 72/211 (34.12%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 46 RESDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVK-----RLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQALSKKGKGGGAXXXXXXRN---PADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVK-RISELEAELARSTAASELKVRALRQEHERVK 651
++ +L E+D++R KR LE K G E + Q ++K L++ L + + + + KL WY+ENQD+LD N ++EQ E + L+ + GG N P+D+++I+ LE + EL EALR+R+PD LA+LIRAA P++ +EL+ ++ ++S LE E+ S +VRALRQEHE++K
Sbjct: 2 KQEELKQELDQMRRDKRDLECKLGG-------MKGGVEELEEQNNDMKISAVENLRKELEEARLEHLTEAKMLKEKLKWYAENQDILDANDKLIQEQREMIKTLKLNM-----GGDKKLNGNNNNRSLPSDVKRIRSLEKHVKELEEALRKRNPDCLANLIRAAGPSE-EELKTQRELQLKVSLLEEEIKEREVESSKRVRALRQEHEKIK 199
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A662Y0L2_9STRA (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0L2_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.950e-15 Identity = 76/231 (32.90%), Postives = 124/231 (53.68%), Query Frame = 1
Query: 40 QARESDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLR----------QALSKKGK------GGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRND---GNVKRISELEAELARSTAASELKVRALRQEHERVKNGLQRQLE 675
Q + ++L E+++++ AK LE + G D + ++ ++VK LQ L+ A + KLDWY ENQ LLD +Q+EEL RLR A S K + GG + R+PADIR+I++LEA+L+EL EA+RRRHPDSLA+LI A+R D + + ++++ + EL ++ +SE ++ + RQ+ E++ +R+L+
Sbjct: 513 QQKVNELTLELNRVKKAKVELECRYE---------GVDLSQVAQEAQQVKELQTELALARKEHVHALNALQKKLDWYVENQRLLD-------DQDEELKRLRLQVAGQVSEVAATSAKPERHSSQAGGPSPMRSHRRSPADIRRIQELEARLSELEEAMRRRHPDSLANLILASRRADEESKARTLEREHEEKLAAVSRELEQAQESSETRLASFRQQQEKLLLQYRRKLK 727
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A662XCD7_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCD7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.420e-14 Identity = 76/232 (32.76%), Postives = 120/232 (51.72%), Query Frame = 1
Query: 40 QARESDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQALS----------------KKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQE----LRNDGNVKRISELEAELARSTAASELKVRALRQEHERVKNGLQRQLE 675
Q + ++L E+++++ AK LE + G D + ++ ++VK LQ L+ A + KLDWY ENQ LLD +Q+EEL RLR ++ GG + R+PADIR I++LEA+L+EL EA+RRRHPDSLA+LI A+R D + L + K ++ L EL ++ SE ++ + RQ+ E++ +R+L+
Sbjct: 731 QQKVNELTLELNRVKKAKVELECRYE---------GVDLSQVAQEAQQVKELQNELALAKKEHVHALNALQKKLDWYVENQRLLD-------DQDEELKRLRLQVAGPVSEVAATPAKPDRHNAQAGGPSPMRSHRRSPADIRHIQELEARLSELEEAMRRRHPDSLANLILASRRADEESKARTLEREYEEK-LAALSRELEQAQETSETRLASFRQQQEKLLLQYRRKLK 945
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A329T6U4_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T6U4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.450e-14 Identity = 70/212 (33.02%), Postives = 111/212 (52.36%), Query Frame = 1
Query: 52 SDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQAL---------SKKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQE----LRNDGNVKRISELEAELARSTAASELKVRALRQEHERV 648
+++ E+D+++ AK LE + G D + ++ + + LQ L + + KLDWY ENQ LLD +Q+EEL RLR+ + SK + + R+P DIR+I++LE +LAEL EA+RRRHPDSLA+LI A+R D + L D K ++ L EL ++ ++E K+ + RQ+ E++
Sbjct: 847 NEVTLELDRVKKAKVELECRYE---------GVDLTQVAQEAHQARELQSELELSKKEHSHALNTLQKKLDWYVENQRLLD-------DQDEELRRLRRQVTAQTPEPTPSKSQRANSSPSRAHRRSPMDIRRIQELEGRLAELEEAMRRRHPDSLANLILASRRADEESKTRALEQDYQEK-LAALSRELEQAHESNETKLASFRQQQEKL 1041
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A8J5J8Y3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J8Y3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.010e-14 Identity = 70/212 (33.02%), Postives = 111/212 (52.36%), Query Frame = 1
Query: 52 SDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQAL---------SKKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQE----LRNDGNVKRISELEAELARSTAASELKVRALRQEHERV 648
+++ E+D+++ AK LE + G D + ++ + + LQ L + + KLDWY ENQ LLD +Q+EEL RLR+ + SK + + R+P DIR+I++LE +LAEL EA+RRRHPDSLA+LI A+R D + L D K ++ L EL ++ ++E K+ + RQ+ E++
Sbjct: 531 NEVTLELDRVKKAKVELECRYE---------GVDLTQVAQEAHQARELQSELELSKKEHSHALNTLQKKLDWYVENQRLLD-------DQDEELRRLRRQVTAQTPEPTPSKGQRANSSPSRAHRRSPMDIRRIQELEGRLAELEEAMRRRHPDSLANLILASRRADEESKTRALEQDYQEK-LAALSRELEQAHESNETKLASFRQQQEKL 725
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: A0A833WG26_PHYIN (Centrosomal protein of 162 kDa n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WG26_PHYIN) HSP 1 Score: 82.4 bits (202), Expect = 6.270e-14 Identity = 71/212 (33.49%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 52 SDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQ---------ALSKKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQE----LRNDGNVKRISELEAELARSTAASELKVRALRQEHERV 648
+++ E+D+++ AK LE + G D + ++ ++ + LQ L + A + KLDWY ENQ LLD +Q+EEL RLR+ LS K + R+P DIR+I++LE++LAEL EA+RRRHPDSLA+LI +R D + L D K ++ L EL ++ ++E K+ + RQ+ E++
Sbjct: 824 NEVTLELDRVKKAKVELECRYE---------GVDLTQVAQEAQQARELQNELELCKKEHSHALNALQKKLDWYVENQRLLD-------DQDEELQRLRRQVAAQTPEPTLSNDQKANPSPARSHRRSPMDIRRIQELESRLAELEEAMRRRHPDSLANLILVSRRADEESKTRALERDYQEK-LAALSRELEQAHESNETKLASFRQQQEKL 1018
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Match: W2QVY4_PHYPN (Centrosomal protein of 162 kDa n=66 Tax=Phytophthora TaxID=4783 RepID=W2QVY4_PHYPN) HSP 1 Score: 80.5 bits (197), Expect = 2.710e-13 Identity = 71/212 (33.49%), Postives = 113/212 (53.30%), Query Frame = 1
Query: 52 SDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGDAEGMLRQGEEVKRLQELLSQEVAGRAEDRRAARAKLDWYSENQDLLDGNLDRMREQEEELGRLRQAL---------SKKGKGGGAXXXXXXRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQE----LRNDGNVKRISELEAELARSTAASELKVRALRQEHERV 648
+++ E+D+++ AK LE + G D + ++ + ++LQ L + A + KLDWY ENQ LLD Q+EEL RLR+ + SK K + R+ DIR+I++LE++LAEL EA+RRRHPDSLA+LI A+R D++ L D K ++ L EL ++ ++E K+ + RQ+ E++
Sbjct: 598 NEITLELDRVKKAKVELECRYE---------GVDLTQVAQEAQHAQQLQSELELSKKEHSHALAALQKKLDWYVENQRLLD-------HQDEELRRLRRQVASQPLDPTPSKDQKVHASPARSHRRSSMDIRRIQELESRLAELEEAMRRRHPDSLANLILASRRADAESKTRALEQDYQEK-LAALSRELEQAHESNETKLASFRQQQEKL 792 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5833.16308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5833.16308.1 >prot_Ecto-sp13_S_contig5833.16308.1 ID=prot_Ecto-sp13_S_contig5833.16308.1|Name=mRNA_Ecto-sp13_S_contig5833.16308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp QARLRAESALVEAQARESDLMFEVDKLRTAKRGLEAKATQAAAAAAKFGGback to top mRNA from alignment at Ecto-sp13_S_contig5833:4671..8162+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5833.16308.1 ID=mRNA_Ecto-sp13_S_contig5833.16308.1|Name=mRNA_Ecto-sp13_S_contig5833.16308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3492bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5833:4671..8162+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5833:4671..8162+ >mRNA_Ecto-sp13_S_contig5833.16308.1 ID=mRNA_Ecto-sp13_S_contig5833.16308.1|Name=mRNA_Ecto-sp13_S_contig5833.16308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5833:4671..8162+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |