mRNA_Ecto-sp13_S_contig5832.16306.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 4.680e-154 Identity = 230/265 (86.79%), Postives = 240/265 (90.57%), Query Frame = 1
Query: 1 MVMHTLTLARRCRIGWHASGSLIRALSSSRSRLLFTDDRATRPGPTPPPRIAGASMALQTATRPSSPAWNTYPGARFSSLARPNEFVAAGSPVSRSSSXXXXXSDFTVAEDGTEKFLVAAHVLEANQVLFARVEGLVTGVKTRHSVQVSEERHLEAGGNLVLMNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAKEHGI 795
M MHTLTLARRCR GW ASGSLI ALSSSRSRLLFTDDRATRPGPTPPPRIAGASMAL +PSSP+ YPGA FSSLARPNEFVAAGSPVS SSXXXXXSD+TV +DGTEKF+VAA VLEANQVLF+RVEGLVTGVKTRHSVQ+S+ERHLE G +L LMNHSCEPNCQLEVVDT EQPYLRVTVR PRVQPNE L IDYNAMEIDMT PFDCQCGAVRCRG VSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWA+EHGI
Sbjct: 1 MAMHTLTLARRCRTGWQASGSLIGALSSSRSRLLFTDDRATRPGPTPPPRIAGASMALTADAKPSSPS-PVYPGAGFSSLARPNEFVAAGSPVS--SSXXXXXSDYTVVQDGTEKFVVAARVLEANQVLFSRVEGLVTGVKTRHSVQLSKERHLETGSDLALMNHSCEPNCQLEVVDTAEQPYLRVTVRAPRVQPNEALEIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGI 262
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE) HSP 1 Score: 336 bits (862), Expect = 2.490e-112 Identity = 202/356 (56.74%), Postives = 220/356 (61.80%), Query Frame = 1
Query: 7 MHTLTLARRCRIGWHASGSLIRALSSSRSRLLFTDDRATRPG------PTPPPRIAGASMALQTATRPSSPAWNTYPGARFSSLARPNEFVAAGS-----------------------PVSRSSSXXXXXS-------------DFTVAEDGTEKFLVAAHVLEANQVLFARVEGLVTGVKTRHSVQVSEERHLEAGGNLVLMNHSCEPNCQLEVVDTV--------------------------------------------------EQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAKEHGIV 798
MHTLTL RRC GW ASGSLIRAL+SSR+RLLFTDD ATRPG P P R+ GASM ++ SS AW+TY GA SSLA PN AG PV SS XXXX DFTV +DGTEKFLVAA VLEANQ +FARVEGLVTGV TRHSVQVS+ERHLEA +L+ +NHSCEPNCQLEVVD EQPYLRVTVR PR++PNELLTIDYNAMEIDM+ PFDCQCGAVRCRG VSGFSNLSRAEQ+EYIDGGAT SPPLTGAVKTWA+E+ IV
Sbjct: 1 MHTLTLVRRCPTGWQASGSLIRALTSSRNRLLFTDDLATRPGGEEHGGPPPSTRVGGASMVPKSPVTSSSTAWSTYRGAWLSSLAGPNNDYVAGDVAVMVSGERGGGIGGKGNTLAPFPVGFSSRSXXXXXXXXXXXXXXXXSLDFTVVKDGTEKFLVAARVLEANQAIFARVEGLVTGVSTRHSVQVSKERHLEARCDLMFLNHSCEPNCQLEVVDAADHWVGWKSWANPNPIGIRKGVIEILKCSTLEKYCSNNRRAHAMNTFCNPQEQPYLRVTVRAPRIRPNELLTIDYNAMEIDMSCPFDCQCGAVRCRGWVSGFSNLSRAEQKEYIDGGATKSPPLTGAVKTWAQENDIV 356
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: D8LGU6_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU6_ECTSI) HSP 1 Score: 208 bits (530), Expect = 1.340e-65 Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 1
Query: 487 MNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAKEHGIV 798
MNHSCEPNCQLEVVDT EQPYLRVTVR PRVQP+ELLTIDYNAMEIDMT PFDCQCGAVRCRG VSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWA+EHGIV
Sbjct: 1 MNHSCEPNCQLEVVDTAEQPYLRVTVRAPRVQPSELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIV 104
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: D8LGU7_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU7_ECTSI) HSP 1 Score: 106 bits (265), Expect = 3.270e-26 Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 616 MEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAKEHGIV 798
MEIDM+ PF+CQCGAVRCRG VSGFSNLSR EQ+EYI+GGAT SP LTGAVK WA+EH IV
Sbjct: 1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: A0A3M6VG35_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VG35_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.480e-15 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 1
Query: 397 VEGLVTGVKTRHSVQVSEERHLEAGGNLVLMNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAE 711
V G + + TR +VQ++ +H+ G L +NHSC PN ++EVV+T + V + ++ E LT DY+ E DM FDC+CGA++CRG + G LS E
Sbjct: 81 VSGNLYSMPTRFTVQLTRNKHMHFTGGLEFINHSCNPNTRIEVVETEAKVSF---VAITSIKKGEHLTFDYSTSEWDMDEKFDCRCGALKCRGHIGGAKYLSDDE 182
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: A0A3L7SDW3_9BACT (SET domain-containing protein-lysine N-methyltransferase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SDW3_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 1.730e-12 Identity = 37/102 (36.27%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 421 KTRHSVQVSEERHLEAGGNLVLMNHSCEPNCQLEVVDTVEQPYLRVTVRVPR-VQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQEEY 723
++R ++QV+ + H+E G VLMNHSC+PNC + + V + + +R R + E +TIDY+ E ++T C+CG+++CRG V+G+ +LS + Y
Sbjct: 387 RSRRTIQVAADMHVEPDGVAVLMNHSCDPNCGVVIRSGVRE----IEIRALRPIAAGEEITIDYDTFEYEVTLGGACRCGSLKCRGRVAGYKHLSSDVKARY 484
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: A0A1E7LCM6_9ACTN (Post-SET domain-containing protein n=1 Tax=Streptomyces nanshensis TaxID=518642 RepID=A0A1E7LCM6_9ACTN) HSP 1 Score: 73.6 bits (179), Expect = 1.910e-12 Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 1
Query: 349 LVAAHVLEANQVLFARVEGLVTGVKTRHSVQVSEERHLEAGGNLV-----------LMNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSR 705
L+A + + +LF EG +T V +R+S+Q+ + HL+ MNHSCEPN +E R V + P + +T YN E+DM+ PFDC+CG+ C G ++GF++ +R
Sbjct: 18 LLACEQVRSGSLLFT-AEGELTDVPSRYSLQIGDGIHLDLPSGYDQETIMDSYFWRFMNHSCEPNATVEG---------RQVKAVRDIGPGDEITFHYNTTELDMSEPFDCECGSALCEGRIAGFAHTTR 137
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: W5WEZ3_9PSEU (Uncharacterized protein n=1 Tax=Kutzneria albida DSM 43870 TaxID=1449976 RepID=W5WEZ3_9PSEU) HSP 1 Score: 72.8 bits (177), Expect = 4.000e-12 Identity = 47/142 (33.10%), Postives = 69/142 (48.59%), Query Frame = 1
Query: 310 SDFTVAEDGTEKFLVAAHVLEANQVLFARVEGLVTGVKTRHSVQVSEERHLEA----GGNLVL-------MNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLS 702
S V G E +VA+ LF V G +TGV TR+SVQ+ + H++ G V+ NHSCEPN +L+ R + ++ + +T Y E +M PFDC+CG+ +C G +SGF +LS
Sbjct: 6 SGVAVVRSGGEYTIVASRPFATGSRLF-EVNGEITGVPTRYSVQIGPDSHIDLPDRYGTEEVMDRFFWRFTNHSCEPNVRLDG---------RQFFALRPIERWQEITFHYGTTEYEMAEPFDCRCGSAQCEGRISGFRHLS 137
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: UPI00195C5168 (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Lentzea nigeriaca TaxID=1128665 RepID=UPI00195C5168) HSP 1 Score: 71.2 bits (173), Expect = 1.270e-11 Identity = 49/142 (34.51%), Postives = 69/142 (48.59%), Query Frame = 1
Query: 322 VAEDGTEKFLVAAHVLEANQVLFARVEGLVTGVKTRHSVQVSEERHLEAGGNLVL-----------MNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQ 714
V DG E LVA + ++LF VEG VT V TR++VQV + H++ MNHSC+P + R + + V+ + +T +YN E DM PF C+CG+ RC G V GF +LS E+
Sbjct: 16 VRADG-EYRLVANRPITEGELLFT-VEGEVTTVPTRYTVQVGRDTHVDVPAEYDFEAILDRFYWRFMNHSCDPTVFVRG---------RAVISLKPVEFGQDITFNYNTTEFDMAEPFACRCGSDRCSGRVQGFRHLSGEER 146
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Match: M4B400_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B400_HYAAE) HSP 1 Score: 71.2 bits (173), Expect = 2.680e-11 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 442 VSEERHLEAGGNLVLMNHSCEPNCQLEVVDTVEQPYLRVTVRVPRVQPNELLTIDYNAMEIDMTYPFDCQCGAVRCRGCVSGFSNLSRAEQEEYI 726
++ E+H+ G L +NHSC+PN + +D VE + V + ++ LT DY+ E DM FDC+CG+ RC G +SG LS E E +
Sbjct: 91 ITPEKHISFTGGLEFVNHSCDPNTR---IDVVESEAIVSFVAIKPIKEGNHLTFDYSTSEWDMDEKFDCRCGSPRCSGYISGAKYLSDQEVNERL 182 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5832.16306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5832.16306.1 >prot_Ecto-sp13_S_contig5832.16306.1 ID=prot_Ecto-sp13_S_contig5832.16306.1|Name=mRNA_Ecto-sp13_S_contig5832.16306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp MVMHTLTLARRCRIGWHASGSLIRALSSSRSRLLFTDDRATRPGPTPPPRback to top mRNA from alignment at Ecto-sp13_S_contig5832:2483..3929- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5832.16306.1 ID=mRNA_Ecto-sp13_S_contig5832.16306.1|Name=mRNA_Ecto-sp13_S_contig5832.16306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5832:2483..3929- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5832:2483..3929- >mRNA_Ecto-sp13_S_contig5832.16306.1 ID=mRNA_Ecto-sp13_S_contig5832.16306.1|Name=mRNA_Ecto-sp13_S_contig5832.16306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5832:2483..3929- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |