mRNA_Ecto-sp13_S_contig5827.16299.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: D8LBG5_ECTSI (Spermidine/spermine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG5_ECTSI) HSP 1 Score: 1177 bits (3046), Expect = 0.000e+0 Identity = 588/612 (96.08%), Postives = 597/612 (97.55%), Query Frame = 1
Query: 97 MVAEEEADAPTDMGASFESSADPVSAGGVCVVTSGLSPDLSFITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPPVALQELAKPRPKLSETQADLESIMAYGEENEDTKGTPAHTFDRCWEPDVRRPLSRLVGGATDNDVPLAAFDADGTLWDGDSAEIFLEWMDSSNRWSQHEDFVSRYYSILASGDKKGAYGLVAQLFDGMRVSEISKLCEECFQANVEDLVISEMAELVQDLRARGWRVMIVTASPTWIVEPGARRLGLGPGDVLGIEVEVSEGKATSALRHPLPVQEGKVEALQMAFNSTRPTLAVGNSLDDGAMLGYARGFALVSNPNSAELESLARDSGWGIHRLDVESATLEVA 1932
MVAEEEADAPT+MGASFESSADPVS GGVCV SGLSPD S ITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYD+IVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAF LPPVALQELAKPRPKLSETQADLESIMAYGEENEDTKGTPAH D CWEPDVRR LSRLV GATD DVPLAAFDADGTLWDGDSAEIFLEWMD+SNRWSQHEDFV+RYY++LASGDKKGAYGLVAQLFDGM VSEISKLCEECFQ NVEDLVISEMAELVQDLRARGWRV+IVTASPTWIVEPGARRLGLGP DVLGIEVEVS+GKATSALRHPLPVQEGKVEALQMAFNSTRPTLAVGNSLDDGAMLGYARGFALVSNPNSAELESLARDSGWGIHRL+VESATLEVA
Sbjct: 1 MVAEEEADAPTEMGASFESSADPVSTGGVCVAKSGLSPDFSMITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDIIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFALPPVALQELAKPRPKLSETQADLESIMAYGEENEDTKGTPAHICDSCWEPDVRRSLSRLVSGATDKDVPLAAFDADGTLWDGDSAEIFLEWMDTSNRWSQHEDFVARYYALLASGDKKGAYGLVAQLFDGMLVSEISKLCEECFQENVEDLVISEMAELVQDLRARGWRVIIVTASPTWIVEPGARRLGLGPEDVLGIEVEVSQGKATSALRHPLPVQEGKVEALQMAFNSTRPTLAVGNSLDDGAMLGYARGFALVSNPNSAELESLARDSGWGIHRLEVESATLEVA 612
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A7S2UVX5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX5_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.850e-86 Identity = 137/234 (58.55%), Postives = 173/234 (73.93%), Query Frame = 1
Query: 454 RALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPPVALQELAKPRPKLSETQADLESIMAYG 1155
R L++GGGDGG+ARE LRH DV +VD VDIDAEV+ AS++ +P IWRHP S+ D+ + L+ D RL +R DG FL D EGYD+IVVDASDPVGPG+ALY+D FYASLR RL+P GAV+VQGGSFWYLP VFRTV+HGLK +FP V+ QCFT++YPGG+WN+Q+ATLGDDP +VD EK + + + L +Y+ H AAF LPP+A L P +S AD + +G
Sbjct: 1 RVLVVGGGDGGSAREALRHPDVGHVDFVDIDAEVLRASRELLPSIWRHPHSTADQPLALEDDPRLNIRVMDGFEFLKDAEGEGYDLIVVDASDPVGPGSALYTDSFYASLRARLRPGGAVSVQGGSFWYLPAVFRTVYHGLKSSFPVVKPYQCFTSVYPGGIWNLQVATLGDDPAEVDPEKVSAITGA-PLEWYTAHTHAAAFHLPPIAYAALEIPPAGMSAAGADSDGSFDHG 233
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A3M1TKL5_9DELT (Polyamine aminopropyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1TKL5_9DELT) HSP 1 Score: 278 bits (710), Expect = 1.500e-82 Identity = 151/295 (51.19%), Postives = 187/295 (63.39%), Query Frame = 1
Query: 187 VVTSGLSPDLSFITDPWDRG-VLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTL 1068
++ LSP + TD W G +L+SV V VL D ++ +QR++VLET + GRM+VLD A+Q AE DEA YHE + H LCR+GA+ G KR L+IGGGDGGAARE LRH V +VDLVDID V A++ F P +W P S PLD D R + EDGL FL S E YD+IVVD++DPVGPG L+S+ FYA + +P GA AVQGGSFWYLP V GL AF C++ +YPGGLWN+ LAT GDDP +VD E+A L FYS + H A F L
Sbjct: 7 ILPDALSPSGDWYTDSWQPGALLWSVHVRRVLRDEQTPYQRLRVLETESHGRMMVLDEAVQVAESDEACYHELLVHPGLCRRGASQGP-KRVLVIGGGDGGAAREALRHPGVTHVDLVDIDPAVTRAARDFFPTLWVRPDGSG----PLDDDPRFHLHHEDGLTFLKGQS-EPYDLIVVDSTDPVGPGEVLFSNAFYALVAEHTRPGGAAAVQGGSFWYLPEVLERATTGLAAAFGRAEPYVCWSDVYPGGLWNLVLATFGDDPAEVDRERAGALTGCR---FYSAEVHPALFAL 292
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A7S3NLF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLF0_9STRA) HSP 1 Score: 275 bits (702), Expect = 2.970e-80 Identity = 145/331 (43.81%), Postives = 207/331 (62.54%), Query Frame = 1
Query: 181 VCVVTSGLSPDLSFITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATL--GDDPQDVDLEKANKLC--NSHKLAFYSPQGHHAAF-TLPPVALQELAKPRPKLSETQADLESIMAYGE 1158
+C+ GLSPD F++D W +GV++S + V+ +++S +Q++ +++T ++GR L+LD ALQCAE+DEAGYHE +TH + R AG LIIGGGDGG AREIL++ +D+V+ID V+ +KF+P ++ P S + D R + ED F+ + YD+I++DASDP+GPGA+LY+ FYA ++R L+ +GAV Q GSF+YLP VFRTV+HGL FP V CFTA+YPGG WN+ +ATL D P+ + +L+FY H AAF ++PP+A ELAK P + E QA+ I YGE
Sbjct: 51 ICIKRCGLSPDKRFVSDSWLKGVVWSADIKNVIMEVQSAYQQISIVDTVSLGRALILDGALQCAEKDEAGYHEMMTHVPMLRH--KAGKISDILIIGGGDGGIAREILKYKYFERLDMVEIDQVVVDTCQKFLPRVF--PAS-------IAQDDRFHLFYEDAATFVTSAESQSYDLIIIDASDPIGPGASLYTPTFYAEIKRLLRREGAVVAQCGSFFYLPCVFRTVYHGLSAHFPVVMPYSCFTAVYPGGSWNLAIATLRPSDRPEKPHSRRIRGFLADQQEQLSFYDSAVHRAAFDSIPPLARNELAKGPPSIQELQAEFVDI--YGE 368
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A7C6LJF4_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6LJF4_9FIRM) HSP 1 Score: 193 bits (491), Expect = 5.490e-52 Identity = 112/285 (39.30%), Postives = 158/285 (55.44%), Query Frame = 1
Query: 220 FITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPP 1074
+ T+ W G+ S ++ V++ R+KFQ + + +T GRMLVLDN +Q E+DE YHE + H L + ++ LIIGGGDGGA RE L+H V LVDID EV+ A+K ++P W S D R V EDGL ++ +R+ +DV++VD+SDPVGP AL+ EFY+S+ + L+P G + Q S P V R +FH + + FP R YPGG W+ +LG DP+ V + K + S +L FYSP+ H F L P
Sbjct: 4 WFTEEWLPGLRISAQIKSVVYTKRTKFQELCIFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPLLSHP----NPEKVLIIGGGDGGALRETLKHPQVKEATLVDIDGEVIEAAKTYLPS-WSSSFS----------DKRARVLVEDGLNYVAT-TRDRFDVVLVDSSDPVGPSEALFRPEFYSSIAKVLRPGGMMCAQTESPIATPAVVRDIFHRISRVFPVTRLYTAPVPSYPGGWWSFTCGSLGSDPK-VPVRKPEE---SWELKFYSPEIHERLFILNP 268
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A7C6T0M1_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6T0M1_9FIRM) HSP 1 Score: 191 bits (486), Expect = 2.580e-51 Identity = 113/287 (39.37%), Postives = 161/287 (56.10%), Query Frame = 1
Query: 220 FITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAF--YSPQGHHAAFTLPP 1074
+ T+ W G+ SV+V ++H ++KFQ + + +T A+GR+LVLD+ +Q E DE YHE I H L A + + LI+GGGDGG+ RE+L+H V LVDID V+ ASK+F+P W S D R V +GL F+ ++E YDV++VD++DP+GPG AL+ +EFY S++ L+P G ++ Q + ++P + RTVF + FP + YPGG W ATLG DP + E LAF YSP+ H AF LPP
Sbjct: 4 WFTEEWVPGLELSVQVKSIVHKAKTKFQELAIYDTEALGRILVLDDVIQTTEIDEHIYHECIVHVPLL----AHPNPEEVLIVGGGDGGSLREVLKHPSVKRATLVDIDEGVIEASKRFLPQ-WNTGWS----------DPRARVVIANGLDFVAK-AKEEYDVVIVDSTDPIGPGEALFREEFYRSIKGALRPGGVMSAQTENPIFMPDLVRTVFGRVANVFPVAKLYTGPMPTYPGGFWCYTCATLGPDPSEPVREPQG-------LAFRYYSPEIHRRAFVLPP 267
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: H1XQY3_9BACT (S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Caldithrix abyssi DSM 13497 TaxID=880073 RepID=H1XQY3_9BACT) HSP 1 Score: 196 bits (497), Expect = 4.530e-51 Identity = 115/297 (38.72%), Postives = 171/297 (57.58%), Query Frame = 1
Query: 220 FITDPWDRGVLFSVK-VDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAF-PEVRALQCF-TAIYPGGLWNIQLATLGD-DPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPPVALQELAK 1098
++TD D + S++ EVL+D R+ +Q V+VL T A G+ L LDN + C E+DE YHE ++H + A G+ K L+IGGGDGG RE+LRHD V V +V+ID +V+ A++ +P I V D D RL +R EDG+ F+ D YD+IVVD++DP+GP L+S+ FY + R L GA+ VQG + + VF + LK F P+ + F YP G+W+ Q+ G +P + D KA++ C +H+L +YSP+ H A+F LPP + + +
Sbjct: 146 WLTDK-DENIALSLRHTGEVLYDERTPYQHVKVLNTYAFGKTLTLDNMIMCTEKDEFHYHEMMSHPLMM----AHGNVKNVLVIGGGDGGVVREVLRHDGVEKVTMVEIDGKVVEAARLHLPQIA----------VAFD-DPRLDLRIEDGIKFVADAPAGTYDLIVVDSTDPIGPAEGLFSETFYRNCHRILNDNGAMIVQGEAPRFNEQVFLDIHQTLKNIFGPKNAHIMLFHVPTYPTGVWSGQIGVKGSFNPAEFDEVKASEFCRAHQLKYYSPEIHKASFVLPPYVKEMIGR 426
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: UPI00168A0993 (polyamine aminopropyltransferase n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI00168A0993) HSP 1 Score: 191 bits (484), Expect = 1.250e-50 Identity = 114/299 (38.13%), Postives = 161/299 (53.85%), Query Frame = 1
Query: 220 FITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGI---WRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAI--YPGGLWNIQLATLGD-DPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPPVALQELAK 1098
+ TD + L E+L+D S+FQRV+++ET G+ L +DN + C E+DEA YHE I H A+ GA K L+IGGGDGG REIL+H ++ V +V+IDA V+ A K +P + + HP +L ++ DGL F+ D + E YD+I++D SDPVGP L+S EFY + +R LKP G + Q S + VF + LKK F R I YP G+W+ QLA+ G DP+ V E + L +Y+ + H AAF LP + LA+
Sbjct: 26 WFTDADENQALALRYTGEILYDKTSEFQRVRIIETYGYGKTLTIDNMVMCTEKDEAHYHETIAHPAILAHGAV----KDVLVIGGGDGGTVREILKHPEIERVVMVEIDANVIEACKLHLPTLSQSFSHP--------------KLDLQVGDGLKFIADAAAESYDLIIIDGSDPVGPAEGLFSAEFYRNCQRALKPNGLLVTQAESPAFHQTVFAELNACLKKIFGADRVYVLLFQIPTYPSGIWSFQLASNGAIDPRKVSSESVAAFERENNLQYYNAEIHQAAFALPNYVKKMLAE 306
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A7C7E3B9_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C7E3B9_9FIRM) HSP 1 Score: 187 bits (475), Expect = 8.700e-50 Identity = 106/291 (36.43%), Postives = 155/291 (53.26%), Query Frame = 1
Query: 220 FITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPPVALQEL 1092
+ + W G+ V+++ V++ R+KFQ + + +T GRML LDN +Q E DE YHE I H L K+ L+IGGGDGG REI RH ++ ++ +VDID V+ ASKK++PG ++ Y P RL + +DG F+ ++ E +DVI++D++DP GPG L++ EFY SLRR L P G + Q S + + ++H + FP + A YPGG W +LG DP+ E S L FYSP+ H F L P ++L
Sbjct: 4 YFVEDWLDGLYLGVQIESVVYTTRTKFQELAIFDTCEFGRMLTLDNVIQVTEVDEYIYHECIAHVPLLSHP----DPKKVLLIGGGDGGTLREITRHQNIESITMVDIDEGVIEASKKYLPGF------NQGFYDP-----RLNLVIQDGSVFV-SETEERFDVIIIDSTDPEGPGEVLFTTEFYQSLRRLLTPSGIMCAQTESPLVMTQTVKDIYHRIADVFPITKIFNVPMACYPGGWWCFTCGSLGPDPEKPLREPEE----SWNLKFYSPEVHEKVFILGPKLKKDL 274
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Match: A0A3A6NQC5_9DELT (Polyamine aminopropyltransferase n=1 Tax=Desulfarculus sp. TaxID=2093367 RepID=A0A3A6NQC5_9DELT) HSP 1 Score: 188 bits (477), Expect = 1.750e-49 Identity = 115/306 (37.58%), Postives = 171/306 (55.88%), Query Frame = 1
Query: 220 FITDPWDRGVL-FSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDVIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFTLPPVALQELAKPRPKLSETQADL 1134
F+ P G L ++ V++VLH +++ FQ + V++ +GR+L+LD +Q AE DEAGYHE + H L A +R LIIGGGDGGA RE+L+H + VDL +IDAEV+AA ++F+PG+ + D D R+ V DG+ FL ++E YD ++VD+SDP GP L++ EFYASL++ L+P G AV S++ P + R F L++ F Y G+ LA+LG P + + ++ L +Y+P H AAF LP AL L P+++ Q +L
Sbjct: 30 FLEPPELNGALGLALGVEKVLHQVKTPFQELAVVQAGPLGRVLILDGVIQTAEFDEAGYHEMLVHVPLLTHLAP----QRVLIIGGGDGGALREVLKHPGLERVDLCEIDAEVIAACRRFLPGL----AAGFD-------DPRVRVHIGDGVEFLAG-AQEAYDAVLVDSSDPQGPARGLFNPEFYASLKKALRPGGVAAVLAESYFLFPELIRGTFAVLERLFDFACYYTASVPTYNSGVMGFALASLGPFP--LSPPEPGRVAELGGLRYYTPAAHRAAFALPRPALNLLP---PEVASMQENL 314 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5827.16299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5827.16299.1 >prot_Ecto-sp13_S_contig5827.16299.1 ID=prot_Ecto-sp13_S_contig5827.16299.1|Name=mRNA_Ecto-sp13_S_contig5827.16299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=613bp MVAEEEADAPTDMGASFESSADPVSAGGVCVVTSGLSPDLSFITDPWDRGback to top mRNA from alignment at Ecto-sp13_S_contig5827:1118..8291- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5827.16299.1 ID=mRNA_Ecto-sp13_S_contig5827.16299.1|Name=mRNA_Ecto-sp13_S_contig5827.16299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5827:1118..8291- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5827:1118..8291- >mRNA_Ecto-sp13_S_contig5827.16299.1 ID=mRNA_Ecto-sp13_S_contig5827.16299.1|Name=mRNA_Ecto-sp13_S_contig5827.16299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1839bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5827:1118..8291- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |