mRNA_Ecto-sp13_S_contig5823.16291.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 263 bits (673), Expect = 4.430e-83 Identity = 133/145 (91.72%), Postives = 139/145 (95.86%), Query Frame = -2
Query: 36 MPGSNREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDRRKRSP 470
MPGSNREEEDRSRL GFEIEIFKL+RREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGAN +AGWRGCHGRTLLGAAA GRSEKM+RTLLTAGATDDVNVLFGGE ESALHVAAARGA+D+CRALMIAGADPN+RDR RSP
Sbjct: 1 MPGSNREEEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSP 145
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 243 bits (620), Expect = 1.570e-75 Identity = 128/156 (82.05%), Postives = 131/156 (83.97%), Query Frame = -2
Query: 3 MPGSNREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDRRKRSPLHLAAVAGHHR 470
MPGS REEEDRSRLDGFEIEIFKLV+R AT EQWKEWLRAP EHAAAEGNLD FTRLMDAGAN AGWRGC+GRTLLGAAAFGRSEKMVRT LTAGATDDVNVLFGGERE ALMI GADPN+RDRRKRSPLHLAAVAGHHR
Sbjct: 1 MPGSKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHR 140
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 218 bits (556), Expect = 7.580e-70 Identity = 114/146 (78.08%), Postives = 120/146 (82.19%), Query Frame = -2
Query: 6 RSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGR-SEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDRRKRSPLHLAAVAGHH 440
RSRLDGFEIEIFKLV+ EA PEQWK+W RAPLEHA A GNLDLFTRLMDAGA+G+AGWRGCHGRTLLGAAA G S+KMVR LL AGA DVNV FG ES LHV+AARGAE SC ALMIAGADPNLRD S LHL A AGHH
Sbjct: 10 RSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRDWEGASSLHLTAKAGHH 155
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 206 bits (523), Expect = 5.090e-64 Identity = 109/150 (72.67%), Postives = 124/150 (82.67%), Query Frame = -2
Query: 3 DRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRG--CHGRTLLGAAAFG-RSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDRRKRSPLHLAAVAGHHR 443
DRSR+DGFEIEIFKLV+ EAT QWK+WLR PLEHAAA+GNLDLFTRLMDAGA G+ GWRG CH RTLLGAAA G +S+KM+ LL AG TDDVN +FG ERESALHV+AARGAE++ +ALM AGADP+L + SPLHLAA AGH R
Sbjct: 7 DRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESPLHLAAEAGHDR 156
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 216 bits (550), Expect = 2.450e-62 Identity = 125/187 (66.84%), Postives = 137/187 (73.26%), Query Frame = -2
Query: 9 SLPAIQRNPRT*HHQK*SSWCSPRPTMPGSNREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRAL-------MIAGADPNLRDRRKRSPLHLAAVAGH 548
SLPA QR PRT +PR TM S R+EE RS LD FEIEIFKLV++EAT EQWKEWLRAPLEHAAAEGNLD FTRLMDAGAN +AG RGCHGRTLLGA A RSEKMVRTLLT GATDDV VLFG E ES LHV+AARGAEDSCR + AD + + +++PLHLAA GH
Sbjct: 476 SLPARQRQPRTLTPPT-PIQLAPRNTMSASKRQEEGRSCLDCFEIEIFKLVQKEATSEQWKEWLRAPLEHAAAEGNLDFFTRLMDAGANVEAGRRGCHGRTLLGATACDRSEKMVRTLLTTGATDDVAVLFGVEHESPLHVSAARGAEDSCRVIGENVVRYTSLPADVHAKTTSQQTPLHLAASEGH 661
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 200 bits (508), Expect = 2.680e-60 Identity = 110/160 (68.75%), Postives = 122/160 (76.25%), Query Frame = -2
Query: 3 MPGSNREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDR----RKRSPLHLAAVAGHHR 470
M GS RE DRSR+DGFE++IFKLV+ E TPEQWK+WL APL HAAA+G LDLFTRL++AGA+G AGWRGCHGRTLLG AA +MVR L AGATDDVNV FG +SAL VAAARGAE SC ALMIAGADPN D + S LHLA AGHHR
Sbjct: 1 MSGSKRE--DRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHR 158
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 202 bits (513), Expect = 5.970e-59 Identity = 99/135 (73.33%), Postives = 122/135 (90.37%), Query Frame = -2
Query: 57 SNREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLR 461
++++ +DR+R+DGFE+EIFKLV+REAT +QWKEWLRAPLEHAAA GNL LFTRLMDAGA+ +AGWRGC GRTLLGAAA +++K++R LLTAGA DVNVLFG +RESALH+AAARGAE++ +ALMIAGA+PNLR
Sbjct: 6 ASQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLR 140
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 200 bits (509), Expect = 5.340e-58 Identity = 103/144 (71.53%), Postives = 117/144 (81.25%), Query Frame = -2
Query: 3 LDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTA-GATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDRRKRSPLHLAAVAGHHR 431
LDG E+EIFKLVR +AT QW+EWLRAPLEHAAAEGN+DLFTRLMDAGA+G AGWRGCHGRTLLGAAA+G++E++V LL GAT+DVNV FG ESALHVAA R + R L+IAGADPNL D RSPLH+AA GHHR
Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHR 208
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 198 bits (504), Expect = 5.780e-58 Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = -2
Query: 54 NREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGA-NGQAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRD 458
++ E+ RSRLDGFEIEIFKLV+ E T EQWK+WL+ PLEHAAA GNLDLFTRLMDAG G+ GWRGC+GRTLLGAAA+G+S+K+VR LL AGA DDVNVLFG E +SALHVAAARGAE++ +ALM+AGADPNL D
Sbjct: 6 SKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFD 141
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 195 bits (496), Expect = 1.170e-57 Identity = 109/159 (68.55%), Postives = 125/159 (78.62%), Query Frame = -2
Query: 3 MPGSNREEEDRSRLDGFEIEIFKLVRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGQAGWRGC--HGRTLLGAAAFG-RSEKMVRTLLTAGATDDVNVLFGGERESALHVAAARGAEDSCRALMIAGADPNLRDRRKRSPLHLAAVAGHHR 470
M S REE DRSR+DGFEIEIFKLV+ EAT +QWK+WLR PLEHAAA+GNLDLFTRL+DAGA G+ GW+G RTLLGAAA G +S+ MV+ LL AG T+ VN FG RESALHV ARGAED+ +ALM+AGADPNL + SPLHLAA AGHHR
Sbjct: 1 MSASEREE-DRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHR 158 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5823.16291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5823.16291.1 >prot_Ecto-sp13_S_contig5823.16291.1 ID=prot_Ecto-sp13_S_contig5823.16291.1|Name=mRNA_Ecto-sp13_S_contig5823.16291.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp TRWCPATAARWSGLRFLRSRKFGSAPAIMSALHESSAPRAAATWRADSRSback to top mRNA from alignment at Ecto-sp13_S_contig5823:3976..4548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5823.16291.1 ID=mRNA_Ecto-sp13_S_contig5823.16291.1|Name=mRNA_Ecto-sp13_S_contig5823.16291.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5823:3976..4548+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5823:3976..4548+ >mRNA_Ecto-sp13_S_contig5823.16291.1 ID=mRNA_Ecto-sp13_S_contig5823.16291.1|Name=mRNA_Ecto-sp13_S_contig5823.16291.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5823:3976..4548+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |