mRNA_Ecto-sp13_S_contig5816.16277.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5816.16277.1
Unique NamemRNA_Ecto-sp13_S_contig5816.16277.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A6H5JKX8_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX8_9PHAE)

HSP 1 Score: 567 bits (1461), Expect = 2.250e-201
Identity = 278/290 (95.86%), Postives = 284/290 (97.93%), Query Frame = 1
Query:    1 MALKLPARCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFSEMFPAPFAKLFS 870
            MALKLPA+ PVVILPGFGNDARDYTNPLDGGEDKAFA ALERRG+KTFVV VERSDWLKVASAVLTLDFWKGTCRP+GPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALA+GMWEEGVASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKD+GIFYVTVGGAAL+G KDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVY HLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFSEMF APFAKLFS
Sbjct:   33 MALKLPAKFPVVILPGFGNDARDYTNPLDGGEDKAFASALERRGLKTFVVAVERSDWLKVASAVLTLDFWKGTCRPNGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAKGMWEEGVASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKDKGIFYVTVGGAALLGEKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYTHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFSEMFSAPFAKLFS 322          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A0G4FYU4_VITBC (GPI inositol-deacylase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FYU4_VITBC)

HSP 1 Score: 275 bits (702), Expect = 3.500e-85
Identity = 146/291 (50.17%), Postives = 180/291 (61.86%), Query Frame = 1
Query:   28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETV---RTSLEETGA--DKVLLVGHSAGGWLARAALAEGMWEEGVASE----------DVVAGLVTLGSPHFAGP---MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEG-ATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRP------SGSKGDGMA 825
            P+VILPGFGNDA DYTNP+  GED +   ALERRG   +VVP+ R +WL VA   LT  FW G CRPDGP + WYL +V+ TV   R      GA   KV+LVGHSAGGWLARA + +G W      E          D+V G+++LGSPH+  P   +DMTRG LT+   EYPG F K++GIFYV+V G A+ G   A R +  RFA+ SY+ VCG G    GD  VPL  A+L+G+  VT+ GV+HS++ PD WYGSE VVD WL     EL+        G KG G A
Sbjct:   91 PIVILPGFGNDALDYTNPMKMGEDTSLKAALERRGYNVYVVPIARREWLSVARDFLTRRFWTGECRPDGPGFRWYLDRVRTTVDRVRRRDWPGGALPPKVVLVGHSAGGWLARAVMGDGTWRNETDEETGESTVEYTQDIVQGVISLGSPHYPPPPPALDMTRGVLTYVCREYPGTFHKEKGIFYVSVVGDAVTGDVQADRGTLERFAFQSYEVVCGSGDGVRGDGVVPLRSAYLDGSRCVTMSGVYHSINVPDSWYGSENVVDTWLAAAQDELQQMTTTGREGGKGSGAA 381          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A835Z797_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z797_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.660e-79
Identity = 137/261 (52.49%), Postives = 163/261 (62.45%), Query Frame = 1
Query:   16 PARCP-VVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEG----------VASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDR 765
            P +CP  VILPGF N   DY NP + G + +    L RRGV ++V+P+ER +W  V        FW+G   P+  AY WYL+KV+ TV  + EETGA KV L GHSAGGWLARAAL +G W             V SEDVV G+VTLG+PHF                  PGAFLKDRG+ YVTV GAA+ G KDAPR   AR AY SYQ VCGEG T GD CVP+V AHLEGA Q+TLDGV H+VD P+ WYG++  + R
Sbjct:   62 PVKCPPFVILPGFSNADMDYFNPFNQGYETSLVAGLARRGVTSYVLPLERKEWFNVVRGFREAAFWRGAAPPEC-AYGWYLEKVRATVALAREETGAPKVALCGHSAGGWLARAALGDGTWSTERDASGQAAAIVRSEDVVCGVVTLGAPHF------------------PGAFLKDRGVQYVTVAGAAIRGAKDAPRADPARRAYNSYQLVCGEGETDGDGCVPVVSAHLEGALQITLDGVKHTVDTPNTWYGTDENIGR 303          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: W7T4S9_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4S9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 4.540e-76
Identity = 136/264 (51.52%), Postives = 166/264 (62.88%), Query Frame = 1
Query:   28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVASE--DVVAGLVTLGSPHF--AGP-MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKD---APRRSRAR-----FAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTV 780
            PVVI PGFGND  DY NP++ GE+     AL RRG   +VVPV+R+DWLK A+ + T  FW  T  P   ++ WYL KV +TV  +  E    K L+VGHSAGGWLARAAL +G W    A E  D+V G VTLG+PH   A P + +TRGAL      YPGAFLK +G+FY+TV G A+ G ++   A RR R       FA+ SY  VCG G  +GD  VPL  AHLEGA+QV L  VFHS++ P  WYGSE V+D WL  V
Sbjct:   45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEV 308          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A7S4K5P4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K5P4_9STRA)

HSP 1 Score: 239 bits (610), Expect = 4.870e-72
Identity = 131/285 (45.96%), Postives = 174/285 (61.05%), Query Frame = 1
Query:   28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKT---FVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMW--EEGVASEDVVAGLVTLGSPHFAGPMD----MTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVG---------VKDAPRR-------SRARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQE 789
            PVVI PGFGND  DY  PL    D     ALERRG       ++PV+R+DWL+VA  +L LDF+ G  +P G  Y WY+ ++K+TV  + EE+G ++VLL+GHSAGGWLARAA+ +G W  E G+ + D V  L T+G+ H   P D    +TRGAL +T   YPGA+L   GI YV+VGG A+VG           DA          S +R A+ SY++VCG+G   GD  VPL +  LEGA Q+ L+GV HS+++       D WYGSEG++D+WL  V +E
Sbjct:   46 PVVICPGFGNDEIDYVEPLKQPRDVGLVSALERRGFDPDLISIIPVKRTDWLRVAGGLLDLDFYTGNAKPTGGGYGWYVDRLKKTVDMAHEESGGERVLLLGHSAGGWLARAAMGDGTWCPEGGIRTADRVRCLATVGAIHRT-PEDASTCVTRGALGYTDSSYPGAYLSGEGIGYVSVGGDAIVGDNAKIAAVETTDADELYAARGEGSASRVAFTSYESVCGQGGVTGDGVVPLDWTRLEGARQIRLEGVVHSINEAGTTIPTDRWYGSEGIIDQWLPAVLEE 329          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A4D9CVP3_9STRA (GPI inositol-deacylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVP3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.420e-71
Identity = 130/262 (49.62%), Postives = 161/262 (61.45%), Query Frame = 1
Query:   37 ILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVASE--DVVAGLVTLGSPHF--AGP-MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRAR---------FAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTV 780
            +  GFGND  DY NP + GE+     AL RRG   +VVPV+R+DWLK A+ + T  FW  T  P   ++ WYL KV +TV  +  E    K L+VGHSAGGWLARAAL +G W    A E  D+V G VTLG+PH   A P + +TRGAL      YPGAFLK +G+FY+TV G A+ G ++ PR +  R         FA+ SY  VCG G  +GD  VPL  AHLEGA+QV L  VFHS++ P  WYGSE V+D WL  V
Sbjct:   37 VPAGFGNDQIDYLNPRNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRRE-PRGAGGRERGGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEV 297          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A2P6V313_9CHLO (GPI inositol-deacylase PGAP1-like isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V313_9CHLO)

HSP 1 Score: 234 bits (596), Expect = 1.770e-70
Identity = 136/279 (48.75%), Postives = 173/279 (62.01%), Query Frame = 1
Query:   28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVA--SEDV-----------VAGLVTLGSPHFAGP----MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEG-ATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDE--------WYGSEGVVDRWLVTVAQ 786
            P+V+LPGFGN   DYT P  G E+ + A AL+RRG + +V+PVER DW KVA A+LTL +W+G      P YSWYL++V E V  +  ETG+++V LV HSAGGWLARA + +G + +G A  SED            V  LVTLG+PH   P     DMT GALT+    +PGA    +G+ YV V G A+ G +DA RR+ + +A GSYQ VCGEG  T GDA VPL  A LEGA+ V LDGVFHS+ +           WYG E V+D WL T+ +
Sbjct:   40 PIVLLPGFGNCTADYTAPF-GDEEASVAAALQRRGFRCYVLPVERKDWFKVARALLTLAYWRGASTTH-PGYSWYLERVAELVDQARRETGSEQVDLVAHSAGGWLARAFIGQGEYRQGGANASEDTLGSAELEPHPAVRALVTLGTPHTPPPPDKVKDMTGGALTWVDATWPGACFAGQGVRYVAVAGRAVRGDRDADRRTLSGYAAGSYQQVCGEGHETEGDAVVPLRSALLEGADHVMLDGVFHSMSRVRTFNEPSGLPWYGDERVLDAWLHTLVR 316          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A7S2MKJ9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKJ9_9STRA)

HSP 1 Score: 234 bits (597), Expect = 3.460e-70
Identity = 127/298 (42.62%), Postives = 178/298 (59.73%), Query Frame = 1
Query:   22 RCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTF-VVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEE--GVASEDVVAGLVTLGSPHFAGP---MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGV----KDAPRRSR---------------ARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQELRPSGSKGDGM 822
            + P+VI PGF ND  DY +PL    +  F   L+RRG  +  +V V+RSDW++VA  +  ++F++    P G  Y WY++++KE V  + EE+G +KV+LVGHSAGGWLARAA+ +G+W+E  GV + D +  L T+G+ H   P      TRGAL +T+ EYPGAFL + G+ YVTVGG A++G     KD     R               A+ A+ SY+ VCGEG+  GD  VPL +  LEGA  + L+GV HS+++       D WYGSE V+DRWL  V +E     +K  G+
Sbjct:   40 KTPIVICPGFFNDEIDYISPLQQPPEVGFVSGLQRRGFTSISIVNVKRSDWVRVAGGLFDINFYRNKALPTGNGYGWYIERLKEAVDRAYEESGGEKVMLVGHSAGGWLARAAMGDGVWDEEGGVKTADRIRCLTTVGAIHKPPPELGSCSTRGALAYTNTEYPGAFLAEEGVTYVTVGGDAVMGYDSKKKDEVNEGREAVDEIYAVRGEGSSAKVAFDSYEIVCGEGSVTGDGVVPLEWTMLEGARHIALEGVLHSINEAGTTVPTDRWYGSEKVLDRWLPVVLEEAGLVENKKSGL 337          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A448YV45_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV45_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.260e-69
Identity = 139/328 (42.38%), Postives = 190/328 (57.93%), Query Frame = 1
Query:    4 ALKLPARCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGV---KTFVVPVERSDWLKVASAVLTLD-FWKGTCRPDGPAYSWYLQKVKETVRTSLEE------TGADKVLLVGHSAGGWLARAALAEGMWEEGVASE---------DVVAGLVTLGSPHFAGPMD----MTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVG------VKDAP---RRSRA-------------RFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFS 834
            A +  A CPVVI PGFGND+ DY  PL+  E+      L RRG    + ++VPV+RSDW++VA  +  +  F+ GT +P GP Y W ++++KETV  + +       +G  KVL++GHSAGGWLARAA+A+G+W EG A E         D +  LVT+G+ H A P D    +TRGAL +T++ YPGAFLKD GI YV++GG+A+VG       KDA     RS A             R A+ SY+ V G G  +GD  VPL +  LEG+ Q+ L  V HS+++       D WYGSE V+DRWL  V +E   + +K      F+
Sbjct:   32 AKQATAFCPVVICPGFGNDSIDYVAPLEQPEEVGLKSVLARRGFDPSQIYIVPVQRSDWIRVAGGLFDIPGFYLGTAKPTGPGYGWXVKRLKETVDLAYDNQAGESTSGKQKVLVIGHSAGGWLARAAMADGLWSEGGAGEEPSSPVRTSDRIRCLVTMGAIH-AAPEDESTCVTRGALRYTAENYPGAFLKDEGIGYVSIGGSAIVGDERKDDEKDADTDQERSEADEFYKQRGEGNSNRVAFTSYKAVSGNGNLIGDGVVPLDWTQLEGSRQIVLPDVLHSINEAGTTFPTDRWYGSEKVIDRWLPAVMEEADLAPAKNGNAFDFA 358          
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A7S2ERA3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERA3_9STRA)

HSP 1 Score: 229 bits (584), Expect = 4.240e-68
Identity = 131/297 (44.11%), Postives = 172/297 (57.91%), Query Frame = 1
Query:   28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTF-VVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEE--GVASEDVVAGLVTLGSPHFAGPMDM----TRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGV-------------------KDAPRRSRARFAYGSYQTVCGE-GATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQELRPSGSKGDG 819
            P+VI PGF ND  DY  PL    +  F  ALERRG     +V ++RSDW++VA  +L  +F+     P G  Y WY+ ++K T+  + EE+G +KVL++GHSAGGWLARAA+A G+W E  GV + D V  L T+G+ H   P+D+    T+GAL FT  EYPG FLK+ GI YVTVGG A+VG+                   K     S A+ AY SY+ V G+ G   GD  VPL +  LEGA  + L+GV HS+++       D WYGSEGV+DRWL  V +E      K  G
Sbjct:   50 PIVICPGFFNDEIDYVEPLKQPREIGFVSALERRGFTNISIVNIKRSDWVRVAGGLLDPNFYFNKALPTGGGYGWYIARLKATIDAAYEESGGEKVLVIGHSAGGWLARAAMANGVWNESEGVKTADRVRCLTTVGAIHRP-PVDLNSCATKGALAFTDREYPGVFLKEDGISYVTVGGDAVVGINSKLTDKINDDREEADEVYKVRGEGSSAKVAYDSYEIVSGQNGGVTGDGVVPLEWTKLEGARNIVLEGVLHSINEAGTTVATDRWYGSEGVIDRWLPVVLEEAGLVEKKNTG 345          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKX8_9PHAE2.250e-20195.86AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A0G4FYU4_VITBC3.500e-8550.17GPI inositol-deacylase n=2 Tax=Vitrella brassicafo... [more]
A0A835Z797_9STRA1.660e-7952.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T4S9_9STRA4.540e-7651.52AB hydrolase-1 domain-containing protein n=1 Tax=N... [more]
A0A7S4K5P4_9STRA4.870e-7245.96Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9CVP3_9STRA1.420e-7149.62GPI inositol-deacylase n=1 Tax=Nannochloropsis sal... [more]
A0A2P6V313_9CHLO1.770e-7048.75GPI inositol-deacylase PGAP1-like isoform A n=2 Ta... [more]
A0A7S2MKJ9_9STRA3.460e-7042.62Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A448YV45_9STRA1.260e-6942.38Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2ERA3_9STRA4.240e-6844.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5816contigEcto-sp13_S_contig5816:2456..7290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score569.7
Seed ortholog evalue7.8e-160
Seed eggNOG ortholog2880.D7FTL3
Model size1259
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Alpha beta-Hydrolases superfamily protein
EggNOG OGs2QS8K@2759,COG1075@1
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-06_008670.1
Cds size873
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5816.16277.1prot_Ecto-sp13_S_contig5816.16277.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5816 2456..6904 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463807.9574-CDS-Ecto-sp13_S_contig5816:2455..25251681463807.9574-CDS-Ecto-sp13_S_contig5816:2455..2525Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 2456..2525 +
1681463807.9764009-CDS-Ecto-sp13_S_contig5816:3668..38591681463807.9764009-CDS-Ecto-sp13_S_contig5816:3668..3859Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 3669..3859 +
1681463807.9871542-CDS-Ecto-sp13_S_contig5816:4729..48771681463807.9871542-CDS-Ecto-sp13_S_contig5816:4729..4877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 4730..4877 +
1681463808.0267396-CDS-Ecto-sp13_S_contig5816:5364..54111681463808.0267396-CDS-Ecto-sp13_S_contig5816:5364..5411Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 5365..5411 +
1681463808.0396495-CDS-Ecto-sp13_S_contig5816:5714..58601681463808.0396495-CDS-Ecto-sp13_S_contig5816:5714..5860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 5715..5860 +
1681463808.050249-CDS-Ecto-sp13_S_contig5816:6247..62851681463808.050249-CDS-Ecto-sp13_S_contig5816:6247..6285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 6248..6285 +
1681463808.0604756-CDS-Ecto-sp13_S_contig5816:6671..69041681463808.0604756-CDS-Ecto-sp13_S_contig5816:6671..6904Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5816 6672..6904 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463808.0707695-UTR-Ecto-sp13_S_contig5816:6904..72901681463808.0707695-UTR-Ecto-sp13_S_contig5816:6904..7290Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5816 6905..7290 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5816.16277.1

>prot_Ecto-sp13_S_contig5816.16277.1 ID=prot_Ecto-sp13_S_contig5816.16277.1|Name=mRNA_Ecto-sp13_S_contig5816.16277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
MALKLPARCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVV
PVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETG
ADKVLLVGHSAGGWLARAALAEGMWEEGVASEDVVAGLVTLGSPHFAGPM
DMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAY
GSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSE
GVVDRWLVTVAQELRPSGSKGDGMASFSEMFPAPFAKLFS*
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mRNA from alignment at Ecto-sp13_S_contig5816:2456..7290+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5816.16277.1 ID=mRNA_Ecto-sp13_S_contig5816.16277.1|Name=mRNA_Ecto-sp13_S_contig5816.16277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4835bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5816:2456..7290+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCACTCAAGTTGCCAGCAAGATGCCCAGTGGTCATTCTGCCCGGCTT CGGCAATGATGCGCGAGACTGTGAGTTTCATTTTTTTTTCAAAATCCTCA GCAACAGCAGTCTGCTCTGGGTACCCCGATAATTTATGAGTGGTGTGTCG CCTAGTTGTGTGCTACTCCCCCTGTTTAGCACCGGCTCGATAGCTAGCCG GCTAGTGTAACGATGTAAGGACGCCAGCCTGTCCGGGACAAAACATGCGA AATGTAACTTTGGTTCAGTCCGCGGGGTCCCCTGTCATCCCTGTCACGGT GATTCTCATGTACAAACATGAAGAGCTGCGCTCCACCGCATGCCAGCAAT ATATTCGTGGCTTTGGTTTGATAACCCGTGCAAAACGTCGTGGTTGGGAA GTACCCGCATTGCGTGCGTTGTTAGCTTATATCAAAACTTCGAAGCTGTA GAGTTAAAGCACAGCTGTTAATGGACTACGTTTTTATGTACAGTAGTCCA CATCCTTCCCACAAGTACACTAGACTACAGTAGTTGGCGGTTGTCGTGCA CGGGCCTTTCTTAGGCCACTTGATATGGTAGCTTTTCCCAGATTGGATCC GGGGGGTCGACAGAAAATGGTATGCCACCCCCCAAAAGAGGAGGTCTGCG TACTGGAAGGCAAGCAGAGCCCATCACGGCACTTCGTTACTTAGTCGTCG CCTCAGAGAGACCTGTTCCTTATCAAACCACCGAGGCTGTACAATCCACT GCTGTGAGCTTTGCGGAGCTAAGTTTGGGCAGCTAGAATGGAGTGTGCAC AGAGTAGCCTCGGATATGAAAGCAAATTCACAATTCCCAGGTTGGAACTT CAACCTATTCCAGTTTGGAATCCATGAGGAATTCCCACGCACGATCGTCC AATGTTCCCAGATTGGAATCCTACTTTTCCAAGCATGATGAACACACACT CCACCCCAGCTCCCCAAACTCGGCTCCGAGAGGCTCGCGCAATGTATAGC CTACAGCGTCTAAGGTTTGATCGCACACGGGTTTCTGTGAGGCAGGTACT GATTAACAAAGCGCTTTGGTGTGCTTTTCCCACCAACTACGCAGAACTCC TGCTGACGCATGGGGATTTGGATGTAAAAGGCGTAATATCGGGATTCCTA GTTGGGAATGGTTTCCATGACAACTGCATGAACTGAATTGCAACGTCATT TTCCCCGTCGCAGATACGAACCCACTGGACGGGGGGGAAGATAAGGCTTT TGCACCAGCTCTGGAACGTAGGGGCGTGAAGACCTTCGTCGTGCCAGTGG AACGGTCTGACTGGCTAAAGGTTGCCAGCGCCGTCCTCACGCTAGACTTT TGGAAAGGCACCTGCCGGCCTGACGGACCGGCCTATTCATGGTATTTGCA GAAGGTGCGATGGCGCAACGCGGCTCAAGGGTTGGTGCTCTACTAGACGG TTGGGTCCTTGGCCATGCATCCATATTTCGACGGAATCGCGTCCGGAAGC TTGCCCGCTCTCAGGCGGTAGTTCAATCAGAAGCTTCGGCAGGTAATCCT TGGTGCTCGAAAGGATCCAATGTTAATTCACATCATTGAGTTCGCTTGTT TAGGTGTTCAGAGTTTGGACCCAACCAATGAGGCTACACACCGCGGCAGC CAGGGAGCGACCACAAGCAAGATATTAACCTCGCCACCCTCACGGTCGGA CATCTGAGTTTCCACAGGATGGATTCTTTCAAAACAATGAAGGACGTCGC GACCCTTCGTGAGGTCACCGATGGTCAAGGATTGTCGACCGATCAGAACT CGAAGGCAACAGTATTGACATGTAGAAACTGCTGGCTTCGCTCGAGCGAG AAATGGTGCGGGGGGGGGGGAATAGGCGGGCCAGGGAAGAGTGTCCTGTC GAAAAGATGTTCCGTTGAGGAGTTTGACCTGCTGCACCTCGGATGGTAGC GTGTACTCGCCGGCTTCATTGCGACCTGCTAGCGCCCTTGAGAGCGGGTG CTACGTTTTTTCGCGTGTGTCGCAGCAACGATGACAACCCAGTGTATCGT GCGGCTGCCGGCCTTCTTATTTATGCATGTACTTCTATGTGTTTTTTTTT TGCTGAAGAACGGCAACACCTTACCCAAACACTTGGGACAGGCGACAAGC TTCACCAGGTCCGACCAACTCCCGATCACCTTAACCAACGCACAGCAGTA CGGCAGGATTGAACGATGACGCTGCGAAGTATCTCTTATTACGACGCTCT ACCCTCACCCTACCGAAAGTGTAGGTGAAGGAGACGGTGCGCACTAGTCT GGAGGAGACGGGGGCGGACAAAGTTCTGCTGGTGGGACACTCTGCCGGGG GTTGGTTGGCGAGAGCGGCGTTAGCGGAAGGGATGTGGGAAGAAGGCGTC GCCAGTGAAGATGTCGTGGCTGGTGAGAGATGAGGCGCGGTGGGGGGGGG GGCGCGAGGTCGGCCGGCAGGCTTATCCCTCCTTCGTTCTTGATTCATTT TTGCTACGTGTTGTTTTCCTGGACAGGCGCAGAGGTACCTAATCTGCGGC TGATAATCGACAGGTTGTCGCCCACCGGATTCTACCCCGTCTGGTTTGAG CCAATGATTCCGCGGAGGATGCATTTTGCTCAGCATCGTAGAAATCGAGC CGGCTATGTAGAGCCACGATGATAGCTAATGGTTGTGATTCTATCCAAAA GTGAGAACAGTTTGGAACCATGTCTCTTCCGACGTTGTACGCTGGTTGTA CTCGATCTCGTGTCCCAAAATTTGTCGACATTCAGACATTGGCATGGGGT GTTGGTCTTGACTACAGTCCACAAATCGGATGCTCAGCTTTGTTCCCTTC TCTTCATCGCTCCCTCCCTTCCTTTTTTTCCTCTTTCGGTTGCGGCGTTG TCGGGGCAGGACTCGTGACCCTGGGGTCTCCACATTTCGCCGGTCCGATG GACATGGTGAGTTAGTTCACCGGCCGGATGAAATATCGTGTCTGTATTCC CTCATCCATTCTTGCCGTGGTCAGTCGTGTTTGATCTCTCTGCAGACCCA GCGCCATGCAGTGTACGTTGCATCCCACAATGCGCCATTGCCCCGAGAAA AATGCGAGTCTGGGTTGACGCCCCCCACGGCTCCGTTTTATCCACCCATC CTGTCGCCAATATCTCGGCCAAGATGATACAGAGTACCACGCCGTCCTTG ACTGGCCTCCCCGTCATCCCATGCGCGTGACCCCCCCCCTCCGCCTCCTT ACTTGGTAGACAAGGGGAGCGTTGACCTTCACCAGCGACGAATACCCGGG GGCGTTCCTTAAGGACAGGGGCATTTTTTACGTTACCGTAGGCGGGGCGG CGCTCGTGGGGGTAAAGGATGCGCCTCGAAGGAGCAGGGCGAGATTCGCG TATGGGTGAGTGATTTTGCGGTGTGGTTCGGCCCCCAAAGTCGGTGGGAA AGGGAGGTTAAGGGCCAAGTTTGTCAATGTCGATGCTCCGGCTTTGTTGA GGGTTTTGTTGGATGGGGTGATGGAGGCCGGTCGCCCTCGCGCAAGGTTG TGCACGCGATTGCTGCTGTTTTAGCGGGGTAAGATGAAACGAGATGAATT ACTTACGCCTCGTGGTCACCGGACGAGACAAAGGTGCCGCACAACAAGCA TTCGCACTACGTAAACATAGCTCCCCACGTTTCTCAGCGAAGTGCCGCGT GCTTCGGTCACCCGTCCTTGTCCCGTTTTGTGACACCCTTTGTCTGTGCT TCCTCGACTTCGCGTGTTCCCGCTTCGTCTGGCGTATTCCAGGAGCTACC AGACCGTATGCGGCGAGGGAGCAACCATGGGTAAGAACTACCGGGAGAGA GGCTATCGGGTGCTGCAGGCGTAGAATGATTGTCTAAGGTGGAAAACCTT GTGTGATTTTGATTCCTGAGATACGAATGCGACTATCGGGCACAATGGCG CCTTACAATACCGCCGACACGACTGTAAAATCCTCTTTTTGCTTCCTCAC CCTTCAAATCTACTGAATAGATGGCCGTGTACATACGGCTGCTTCCCCAA TTGATGTGCTTTTTACTTGGAACGACATTTCCTATTGATTTGAATGAGCA GTCAGGTCTCGGTCCTTTTTGTTGACGCGAAAAAGTCTGTTGTCTGGGGG AGGCGGAATTTTTTTGCCAATAATCGTTCTCACTATTGATGTCGTTGTCC TGGTCCCCAAATGCAGGTGACGCTTGCGTACCCCTCGTCTACGCACACCT CGAGGGGGCCGAACAGGTCACGTTGGATGGCGTGTTTCATTCCGTCGACA AGCCAGACGAGTGGTACGGGTCCGAGGGAGTTGTGGATCGCTGGCTTGTG ACCGTCGCCCAAGAGCTCCGCCCTTCCGGCAGCAAAGGAGACGGAATGGC TTCATTCTCGGAAATGTTCCCTGCGCCGTTCGCGAAGCTCTTCAGCTGAG GAAGTAGGAAGTTCATTGTCATACCTCTGCTGTATGCGAGGGTTTGGGAG GGGAGGGCTAGTTGGTCACCCCGCCCGGCCCTGGCACGCTGGGGCGGCCA TTTAGCAGCGGGGGTGCAACCGTCAACTATTTTTCGAGGTCTTGAGCTGC AAGGCTGCAGGACTTACGTTGCGGAGGTGGAACTTGTGTACCTAATGGGT GTCACGTTTTAGCTGCAGTCCTCCCTTTCTCTGGCATCCTCGTCTGCGTT CGACATCCGTTTGTCACGGAGCGTGTGAGGTATGTCTATGCGCATCAAGA TTTCCACACACAGATATTTGAGACGTCACCATGAATGTGCGTATGTGGCT GCTGAACCGTTCTGACAAGGTTTCGTGATTGCCCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5816:2456..7290+

>mRNA_Ecto-sp13_S_contig5816.16277.1 ID=mRNA_Ecto-sp13_S_contig5816.16277.1|Name=mRNA_Ecto-sp13_S_contig5816.16277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5816:2456..7290+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCACTCAAGTTGCCAGCAAGATGCCCAGTGGTCATTCTGCCCGGCTT
CGGCAATGATGCGCGAGACTATACGAACCCACTGGACGGGGGGGAAGATA
AGGCTTTTGCACCAGCTCTGGAACGTAGGGGCGTGAAGACCTTCGTCGTG
CCAGTGGAACGGTCTGACTGGCTAAAGGTTGCCAGCGCCGTCCTCACGCT
AGACTTTTGGAAAGGCACCTGCCGGCCTGACGGACCGGCCTATTCATGGT
ATTTGCAGAAGGTGAAGGAGACGGTGCGCACTAGTCTGGAGGAGACGGGG
GCGGACAAAGTTCTGCTGGTGGGACACTCTGCCGGGGGTTGGTTGGCGAG
AGCGGCGTTAGCGGAAGGGATGTGGGAAGAAGGCGTCGCCAGTGAAGATG
TCGTGGCTGGACTCGTGACCCTGGGGTCTCCACATTTCGCCGGTCCGATG
GACATGACAAGGGGAGCGTTGACCTTCACCAGCGACGAATACCCGGGGGC
GTTCCTTAAGGACAGGGGCATTTTTTACGTTACCGTAGGCGGGGCGGCGC
TCGTGGGGGTAAAGGATGCGCCTCGAAGGAGCAGGGCGAGATTCGCGTAT
GGGAGCTACCAGACCGTATGCGGCGAGGGAGCAACCATGGGTGACGCTTG
CGTACCCCTCGTCTACGCACACCTCGAGGGGGCCGAACAGGTCACGTTGG
ATGGCGTGTTTCATTCCGTCGACAAGCCAGACGAGTGGTACGGGTCCGAG
GGAGTTGTGGATCGCTGGCTTGTGACCGTCGCCCAAGAGCTCCGCCCTTC
CGGCAGCAAAGGAGACGGAATGGCTTCATTCTCGGAAATGTTCCCTGCGC
CGTTCGCGAAGCTCTTCAGCTGA
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