mRNA_Ecto-sp13_S_contig5800.16250.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: D8LST4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST4_ECTSI) HSP 1 Score: 204 bits (520), Expect = 1.840e-63 Identity = 96/112 (85.71%), Postives = 100/112 (89.29%), Query Frame = 2
Query: 2 RVAHYNDTGFFVRAKGCMVQVGNDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKMFRR 337
RVAHYNDTG F GC+VQVGN PLYLD LL+GYP RFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEE+CITYPRLFTISPE AD KCTCG PGCR K+FRR
Sbjct: 185 RVAHYNDTGLF----GCIVQVGNGPLYLDALLQGYPTRFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEELCITYPRLFTISPEVADTKCTCGAPGCRQKIFRR 292
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A6H5JU89_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU89_9PHAE) HSP 1 Score: 167 bits (424), Expect = 8.580e-51 Identity = 79/106 (74.53%), Postives = 89/106 (83.96%), Query Frame = 2
Query: 2 RVAHYNDTGFFVRAKGCMVQVGNDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCR 319
RVAHYNDTGF GC++QVGNDPLYLD LLKGYP RF+NHSC PNAYL+T AGKGAAQSKR++V +MKEI AGE++CITYP FTISP AAD KCTCG PGC+
Sbjct: 45 RVAHYNDTGF----SGCLLQVGNDPLYLDALLKGYPTRFVNHSCGPNAYLHT--AGKGAAQSKRIWVCSMKEIGAGEDLCITYPWPFTISPTAADTKCTCGAPGCQ 144
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: D7G932_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G932_ECTSI) HSP 1 Score: 112 bits (280), Expect = 3.700e-27 Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 2
Query: 2 RVAHYNDTGFFVRAKGCMVQVGNDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKMFRR 337
R HY D GF+ G DPLY+D + GYPARF NHSC+PNAYL T++ KG K V+ T ++ A GEEVC +YP L + S + + C C P CR KMF+R
Sbjct: 219 RADHYRDVGFYRSIVKVGGDPGEDPLYVDVMRHGYPARFFNHSCEPNAYLQTMVCQKGDLMYKIVWFCTSRDTAEGEEVCFSYPALHSQSSDKEEPDCNCRSPSCRGKMFQR 330
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A183EXE5_9BILA (Histone-lysine N-methyltransferase n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183EXE5_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 8.100e-10 Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 2
Query: 68 NDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKM 328
+D +D + G PAR++NHSCDPN V +G + K++ + + I+AGEE +TY F I A C CG P C+ M
Sbjct: 64 DDERLIDATMAGGPARYINHSCDPNCSTRLVDSGP-SGDDKKIIIIANRPISAGEE--LTYDYQFDIEDTADKIPCLCGAPNCQKWM 147
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A7S0AEX1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEX1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.170e-9 Identity = 33/82 (40.24%), Postives = 43/82 (52.44%), Query Frame = 2
Query: 83 LDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKM 328
+D + G ARF+NHSC NAY + Q K++ VF ++I A EE ITY F + E KCTCG P C +M
Sbjct: 89 VDATMVGCMARFMNHSCQNNAYAKVITVNTEEGQEKKIVVFANRDIKADEE--ITYDYKFPV--EDGSLKCTCGAPNCIGRM 166
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A183ETL1_9BILA (Histone-lysine N-methyltransferase n=2 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183ETL1_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 1.670e-9 Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 2
Query: 68 NDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKM 328
+D +D + G PAR++NHSCDPN V +G + K++ + + I+AGEE +TY F I A C CG P C+ M
Sbjct: 104 DDERLIDATMAGGPARYINHSCDPNCSTRLVDSGP-SGDDKKIIIIANRPISAGEE--LTYDYQFDIEDTADKIPCLCGAPNCQKWM 187
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A7S4KGM4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KGM4_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 2.420e-9 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 2
Query: 2 RVAHYNDTGFFVRAKGC-MVQVGNDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCR 319
R HY+ G GC M ++ D + +D +KG ARF+NHSC PNA+ + K +K++ + +K+I G EV Y F I ++ +C CG P C+
Sbjct: 71 REKHYDSRGI-----GCYMFRLDTDSI-VDATMKGGLARFINHSCSPNAFTRPITIDK---HTKKIVIIALKDIPPGCEVAYDYH--FAIEDDSEKIECLCGAPNCK 166
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: T1G9U2_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G9U2_HELRO) HSP 1 Score: 64.3 bits (155), Expect = 3.050e-9 Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 2
Query: 53 MVQVGNDPLYLDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKM 328
M ++ N L +D + G PAR++NHSC+PN V K + ++ + T ++IA GEE+C Y F + + C CG P CR M
Sbjct: 490 MFRIENTNLVVDATMSGGPARYINHSCNPNCVAEMVPFEK--EKDNKIIIITKRKIAQGEELCYDYK--FDLEDDQHKIPCLCGAPNCRKWM 577
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A7S2A0R2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A0R2_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.360e-9 Identity = 33/82 (40.24%), Postives = 43/82 (52.44%), Query Frame = 2
Query: 83 LDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKM 328
+D G ARF+NHSC PNAY + K++ VF ++I AGEE ITY F + E +CTCG P C +M
Sbjct: 1375 VDATTIGCMARFMNHSCQPNAYANVITVNTDQGLDKKIVVFANRDIQAGEE--ITYDYKFPV--EDGSLRCTCGAPNCIGRM 1452
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Match: A0A0N4V177_ENTVE (Histone-lysine N-methyltransferase n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V177_ENTVE) HSP 1 Score: 64.3 bits (155), Expect = 3.360e-9 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 2
Query: 83 LDTLLKGYPARFLNHSCDPNAYLYTVIAGKGAAQSKRVYVFTMKEIAAGEEVCITYPRLFTISPEAADAKCTCGVPGCRLKM 328
+D + G PAR++NHSCDPN V +G A K++ + + I+AGEE +TY F + + C CG P CR M
Sbjct: 1392 IDATMAGGPARYINHSCDPNCSTCLVTSGT-TADDKKIIIIANRPISAGEE--LTYDYQFELEDDDVKIPCLCGAPNCRKWM 1470 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5800.16250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5800.16250.1 >prot_Ecto-sp13_S_contig5800.16250.1 ID=prot_Ecto-sp13_S_contig5800.16250.1|Name=mRNA_Ecto-sp13_S_contig5800.16250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp ASCALQRHGIFCESEGMHGTGRQRPLVPGHLAEGIPRAVPEPLVRSKRLPback to top mRNA from alignment at Ecto-sp13_S_contig5800:6639..8339+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5800.16250.1 ID=mRNA_Ecto-sp13_S_contig5800.16250.1|Name=mRNA_Ecto-sp13_S_contig5800.16250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1701bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5800:6639..8339+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5800:6639..8339+ >mRNA_Ecto-sp13_S_contig5800.16250.1 ID=mRNA_Ecto-sp13_S_contig5800.16250.1|Name=mRNA_Ecto-sp13_S_contig5800.16250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=435bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5800:6639..8339+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |