mRNA_Ecto-sp13_S_contig58.16241.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig58.16241.1
Unique NamemRNA_Ecto-sp13_S_contig58.16241.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: D7G4Q3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q3_ECTSI)

HSP 1 Score: 618 bits (1594), Expect = 4.750e-214
Identity = 317/332 (95.48%), Postives = 323/332 (97.29%), Query Frame = 1
Query:  328 GEQKETRALDQRSAATHKSEVPAGLVTRQEVPQPQTIGNGSHRGSPDLAKHRSAPPTSKEAEPRTEEPGDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVASKRERSPSRGEGRNRQGEKNKKRNHGQIEARAAATPRKGKGSLSKMPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQ 1323
            GEQKETRALDQRS+ATHKSE PAGLVT QEVPQPQT GNGSHRGSP L+KHRSAPP  KEAE RTEEPGDDGAWPSSLRRYLQRAFDKCDKKQGS+QHAQLEKALHRKVTDAMAENA+LTKDWDNEPLPSLVASKRERSP RG GRNRQGEKNKKRNHGQIEARAAATPRKGKGSLS+MPQADQRRLSNRLERFDLGMRPPPSSSSR+GNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQ
Sbjct:  292 GEQKETRALDQRSSATHKSEAPAGLVTSQEVPQPQTTGNGSHRGSPVLSKHRSAPPAPKEAERRTEEPGDDGAWPSSLRRYLQRAFDKCDKKQGSKQHAQLEKALHRKVTDAMAENAMLTKDWDNEPLPSLVASKRERSPLRGAGRNRQGEKNKKRNHGQIEARAAATPRKGKGSLSRMPQADQRRLSNRLERFDLGMRPPPSSSSRTGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQ 623          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A6H5JZ36_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ36_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 1.060e-175
Identity = 259/269 (96.28%), Postives = 260/269 (96.65%), Query Frame = 1
Query:  523 EEPGDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVASKRERSPSRGEGRNRQGEKNKKRNHGQIEARAAATPRKGKGSLSKMPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQAR 1329
            EEPGDDGAWPSSLRRYLQRAFDKCDKKQGSRQH  LEKALHRKVTDAMAEN +LTKDWDNEPLPSLVASKRERSP RG GRNRQGEKNKKRNHGQIE RAA TPRKGKGSLSKMPQ DQRRLSNRLERFDLGMRPPPSSSSR GNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQAR
Sbjct:    2 EEPGDDGAWPSSLRRYLQRAFDKCDKKQGSRQHELLEKALHRKVTDAMAENTMLTKDWDNEPLPSLVASKRERSPPRGAGRNRQGEKNKKRNHGQIEVRAAGTPRKGKGSLSKMPQVDQRRLSNRLERFDLGMRPPPSSSSRPGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQAR 270          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A3M6VHK7_9STRA (SAC3_GANP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHK7_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.510e-48
Identity = 127/338 (37.57%), Postives = 182/338 (53.85%), Query Frame = 1
Query:  364 SAATHKSEVPAGLVTRQEVPQ-PQTIGNGSHRGSPDLAKHRSAPPTSKEAEPRTEEPGDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVASKRERS---------PSRGEGRNRQGEKNKKR-----NHG--QIEARAAATPRKGKGSLS--KMPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            ++AT  +  P    + +  P+ P  I  G   G+  + K  + P +S          G +  WP SL  Y++RAF +C   +G+   A  + +L   +T+A+  N+L T++W  EPLP LV      +         P+ G   NR    +        N G   +E  +    +  K  L   ++  AD +R   R ERF +  +   S  +   +    Q   +   +G +D AA+ IKGT   +EK+YLRLT PP P++VRP+ +L K+L+ + +KWAKG  DYIYACSQLK+IRQDC VQ IKNAFTV VYE HARIAL+ GD+NE+NQCQTQL
Sbjct:  118 NSATSSANAPPVRFSMRPPPRGPPPISFGXXXGAFSVPKPAALPASSPV--------GSNPKWPDSLHHYVKRAFGRC---KGAADQAITQNSLKEVITNAIMTNSLWTRNWTAEPLPVLVGDTAAAAMQTKVGMGGPTPGPHGNRFASSSPSNSSFSPNQGFVPLEDSSGTKKKTNKRKLDGFEIDGADVQRKHKRRERFHMTKQELKSLVTPEVDTKKLQVLTL---HGELDLAAMVIKGTCQTIEKEYLRLTSPPHPSTVRPEPVLRKALDLVKSKWAKGNHDYIYACSQLKSIRQDCTVQHIKNAFTVSVYETHARIALESGDINEFNQCQTQL 441          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A2P4Y250_9STRA (Leukocyte receptor cluster member 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y250_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.740e-47
Identity = 118/296 (39.86%), Postives = 162/296 (54.73%), Query Frame = 1
Query:  532 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVA----------------------SKRERSPSRGEGRNRQG---------EKNK--KRNHGQIEARAAATPRKGKGSLSKMPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            G +  WP +L  Y++RAF +C   +G+   +  + +L   +T+A+  N+L TK+W  EPLP LV                       ++   SPS    +  QG         +KNK  KR H  +E                M  AD  R + R +RF +  +   S  +   +    Q   ++   G +D AA+ IKGTS  +EK+YLRLT PP P++VRP+ +L K+LE + +KW KG  DYIYACSQLK+IRQDC VQ IKNAFTV VYE HAR+AL+ GD+NE+NQCQTQL
Sbjct:  167 GGNAKWPDALHDYVKRAFARC---KGAADQSITQNSLKEMITNAIMTNSLWTKNWTAEPLPVLVGDTPAAVMQTKIGMGGPMPGAAGNRLAPSPSNSSFQPNQGFVPFKEPSGKKNKMNKRKHDGLE----------------MEDADLHRKNQRRQRFHMTQQELKSLVTPEVDTKKLQ---VLTQEGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNAFTVLVYETHARVALESGDINEFNQCQTQL 440          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: G4Z6T6_PHYSP (SAC3_GANP domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z6T6_PHYSP)

HSP 1 Score: 181 bits (460), Expect = 2.340e-47
Identity = 113/280 (40.36%), Postives = 163/280 (58.21%), Query Frame = 1
Query:  532 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVASKRERSPSR--GEGRNRQGEKNK----KRNHGQIEARAAATP------RKGKGSLSK-----MPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            G +  WP +L  Y++RAF +C   +G+   +  + +L   +T+A+  N+L TK+W  EPLP LV      +     G G    G  N+      ++G  ++     P      +K K +  K     +  AD +R + R +RF +  +   S  +   +    Q   ++  +G +D AA+ IKGTS  +EK+YLRLT PP P++VRP+ +L K+LE + +KW KG  DYIYACSQLK+IRQDC VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL
Sbjct:  165 GGNAKWPDALHDYVKRAFARC---KGAADQSITQNSLKEMITNAIMTNSLWTKNWTAEPLPVLVGDTPAAAMQAKVGMGGPMPGAANRFAAPSPSNGSFQSNRGFVPFKEPSAKKNKANKRKHDGFEIEAADVQRKNQRKQRFHMTQQELKSLVTPEVDTKKLQ---VLTQDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNEFTVAVYETHARVALESGDINEFNQCQTQL 438          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A329SNP8_9STRA (SAC3_GANP domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SNP8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.480e-47
Identity = 112/280 (40.00%), Postives = 163/280 (58.21%), Query Frame = 1
Query:  532 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLV-----ASKRERSPSRGEGRNRQGEK-NKKRNHGQIEARAAATP------RKGKGSLSK-----MPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            G +  WP +L  Y++RAF +C   +G+   +  + +L   +T+A+  N+L TK+W  EPLP LV     A+ + +    G      G K     +   ++      P      +K K +  K     + +AD +R + R +RF +  +   S  +   +    Q   ++  +G +D AA+ IKGTS  +EK+YLRLT PP P++VRP+ +L K+LE + +KW KG  DYIYACSQLK+IRQDC VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL
Sbjct:    2 GGNAKWPDALHNYVKRAFARC---KGAADQSITQNSLKELITNAIMTNSLWTKNWTAEPLPVLVGDTPAAAMQTKMGMGGPMPGAAGHKFASSPSSSSLQPNQTFIPFKEPSSKKNKTNKRKHDGFEIQEADVQRKNQRRQRFHMTQQELKSLVTPEVDTKKLQ---VLTQDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLRKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNDFTVSVYETHARVALESGDINEFNQCQTQL 275          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: W2HLF3_PHYPR (SAC3_GANP domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2HLF3_PHYPR)

HSP 1 Score: 181 bits (459), Expect = 3.680e-47
Identity = 113/280 (40.36%), Postives = 165/280 (58.93%), Query Frame = 1
Query:  532 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLV-----ASKRERSPSRGEGRNRQGEK-NKKRNHGQIEARAAATP------RKGKGSLSK-----MPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            G +  WP +L  Y++RAF +C   +G+   +  + +L   +T+A+  N+L TK+W  EPLP LV     A+ + +    G      G+K     +   +++     P      +K K +  K     +  AD +R + R +RF +  +   S  +   +    Q   ++  +G +D AA+ IKGTS  +EK+YLRLT PP P++VRP+ +L K+LE + +KW KG  DYIYACSQLK+IRQDC VQ IKNAFTV VYE HAR+AL+ GD+NE+NQCQTQL
Sbjct:  174 GGNAKWPDALHDYVKRAFARC---KGAADQSITQNSLKEMITNAIMTNSLWTKNWIAEPLPVLVGDTPAAAMQTKMGMGGPMPGAAGQKFTPSPSSSSLQSNQIFIPFKEPSSKKNKANKRKHDGFEIQDADVQRKNQRRQRFHMTQQELKSLVTPEVDTKKLQ---VLTQDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDRDYIYACSQLKSIRQDCTVQHIKNAFTVSVYETHARVALESGDINEFNQCQTQL 447          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A024GDX3_9STRA (SAC3_GANP domain-containing protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024GDX3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.340e-46
Identity = 123/318 (38.68%), Postives = 164/318 (51.57%), Query Frame = 1
Query:  547 WPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVASKRERSPSRGEGRNRQGEKNKKRNHGQIEARAAATPRKGKGSL----------SKMPQADQRR----LSNRLERFDLGMRPPPSSSSRSGND--------------------------------------------LAFQSKP--MVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            WP SL+ Y++RAF +C   +G+   A  + AL   +T+A+A+N L TKDW  EPLP LV+          +G N Q   +K        + AA T    K             S+ P  +Q      LS   E   + + P  +S    GN                                              + ++KP  +++  G +D  A+TIKGT  K+EK+YLRLT PP P++VRP++IL K+L+ I  KW  G  DYIYACSQLK+IRQDC VQR+KNAFTV+VYE HARIALQ GD+NE+NQCQTQL
Sbjct:  171 WPESLQDYVKRAFARC---KGATDQAVTQNALKELITEAIAKNHLWTKDWIFEPLPRLVS----------DGNNVQSNVDKS-------SPAACTAAMKKSRFHPISTPLCANSRTPTMEQSSAIPILSTTNENLPISIAPTVNSVITKGNKRRKKNNKQKQAVVENLTPEESMRKTQRQQRFLKDQVEIAKQRIYTSMETKPSRVLNVEGDLDLEAMTIKGTCQKVEKEYLRLTSPPHPSTVRPENILRKALDLIQTKWKDGSCDYIYACSQLKSIRQDCTVQRLKNAFTVKVYESHARIALQSGDINEFNQCQTQL 468          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A225VDP7_9STRA (Leukocyte receptor cluster member 8 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VDP7_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.090e-46
Identity = 113/296 (38.18%), Postives = 157/296 (53.04%), Query Frame = 1
Query:  532 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVA---------------------SKRERSPSRGEGRNRQG------------EKNKKRNHGQIEARAAATPRKGKGSLSKMPQADQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            G +  WP +L  Y++RAF +C   +G+      + +L   +T+A+  N+L TK+W  EPLP LV                      +K   SPS    +  QG            + NK+++ G                      AD +R + R +RF +  +   S  +   +    Q   +    G +D AA+ IKGTS  +EK+YLRLT PP P++VRP+ +L K+LE + +KW KG  DYIYACSQLK+IRQDC VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL
Sbjct:   65 GGNAKWPDALHDYVKRAFARC---KGAADQTITQNSLKEMITNAIMTNSLWTKNWTAEPLPVLVGDTPVAVMQTQIGMGGPMPGAGNKFASSPSSNSFQPNQGFVPFKEPSGKKNKMNKRKHDGFXXXXXXXXXXXXXXXXXXXADADLQRKNQRRQRFHMTQQELKSLVTPEVDTKKLQVLTL---EGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNEFTVSVYETHARVALESGDINEFNQCQTQL 354          
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Match: A0A662XJI1_9STRA (SAC3_GANP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJI1_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.340e-46
Identity = 118/291 (40.55%), Postives = 158/291 (54.30%), Query Frame = 1
Query:  532 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVAS--KRERSPSRGEGRNRQGEKNKKR------NHGQIEARAAATP------RKGKGSLSKMPQA------DQRRLSNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDD--------NGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQL 1320
            G +  WP +L  Y++RAF +C   +G+   A  +  L   +T+A+  N L T++W  EPLP+LV         P  G GR   G +   R      N    EA     P      +K K +  K  +A      D +R + R  RF +           +  +LA  + P VD         +G +D AA+ IKGTS  +EK+YLRLT  P P++VRP+ +L K+L  I  KW  G  DY+YACSQLK+IRQDC VQ IKNAFTV VYE HAR+AL+ GD+NE+NQCQTQL
Sbjct:  187 GGNAKWPDALHDYVKRAFARC---KGAADQAITQNTLKELITNAIMANNLWTRNWTAEPLPTLVGDIPAAAMQPKIGLGRAPPGPQGPGRQFSPASNGNSFEASQPYVPFKPAPAKKNKANKRKQHEAFEMEDVDAQRKNERRNRFHM-----------TKQELASLATPEVDTKKLRVLTLDGDLDLAAMVIKGTSQTIEKEYLRLTSAPHPSTVRPEPVLHKALALIKKKWKAGECDYVYACSQLKSIRQDCTVQHIKNAFTVAVYESHARVALESGDINEFNQCQTQL 463          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58.16241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q3_ECTSI4.750e-21495.48PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JZ36_9PHAE1.060e-17596.28PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A3M6VHK7_9STRA2.510e-4837.57SAC3_GANP domain-containing protein n=1 Tax=Perono... [more]
A0A2P4Y250_9STRA1.740e-4739.86Leukocyte receptor cluster member 8 n=1 Tax=Phytop... [more]
G4Z6T6_PHYSP2.340e-4740.36SAC3_GANP domain-containing protein n=6 Tax=Phytop... [more]
A0A329SNP8_9STRA2.480e-4740.00SAC3_GANP domain-containing protein n=1 Tax=Phytop... [more]
W2HLF3_PHYPR3.680e-4740.36SAC3_GANP domain-containing protein n=12 Tax=Phyto... [more]
A0A024GDX3_9STRA1.340e-4638.68SAC3_GANP domain-containing protein n=4 Tax=Albugo... [more]
A0A225VDP7_9STRA3.090e-4638.18Leukocyte receptor cluster member 8 n=1 Tax=Phytop... [more]
A0A662XJI1_9STRA3.340e-4640.55SAC3_GANP domain-containing protein n=2 Tax=Nothop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58contigEcto-sp13_S_contig58:18668..22465 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score625.5
Seed ortholog evalue1.7e-176
Seed eggNOG ortholog2880.D7G4Q3
Preferred nameLENG8
Model size1347
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
Exons8
EggNOG free text desc.transcription, DNA-templated
EggNOG OGsKOG1861@1,KOG1861@2759
Ec32 ortholog descriptionSAC3/GANP/Nin1/mts3/eIF-3 p25
Ec32 orthologEc-20_000790.1
Cds size1209
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58.16241.1prot_Ecto-sp13_S_contig58.16241.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig58 18668..22327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463803.6720588-CDS-Ecto-sp13_S_contig58:18667..187181681463803.6720588-CDS-Ecto-sp13_S_contig58:18667..18718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 18668..18718 -
1681463803.6866205-CDS-Ecto-sp13_S_contig58:19142..193641681463803.6866205-CDS-Ecto-sp13_S_contig58:19142..19364Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 19143..19364 -
1681463803.6989985-CDS-Ecto-sp13_S_contig58:20040..203171681463803.6989985-CDS-Ecto-sp13_S_contig58:20040..20317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 20041..20317 -
1681463803.7092793-CDS-Ecto-sp13_S_contig58:20501..205821681463803.7092793-CDS-Ecto-sp13_S_contig58:20501..20582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 20502..20582 -
1681463803.725097-CDS-Ecto-sp13_S_contig58:20755..210541681463803.725097-CDS-Ecto-sp13_S_contig58:20755..21054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 20756..21054 -
1681463803.7367322-CDS-Ecto-sp13_S_contig58:21257..213461681463803.7367322-CDS-Ecto-sp13_S_contig58:21257..21346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 21258..21346 -
1681463803.7462165-CDS-Ecto-sp13_S_contig58:21602..216971681463803.7462165-CDS-Ecto-sp13_S_contig58:21602..21697Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 21603..21697 -
1681463803.7564778-CDS-Ecto-sp13_S_contig58:22232..223271681463803.7564778-CDS-Ecto-sp13_S_contig58:22232..22327Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig58 22233..22327 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463803.7703161-UTR-Ecto-sp13_S_contig58:22327..224651681463803.7703161-UTR-Ecto-sp13_S_contig58:22327..22465Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig58 22328..22465 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig58.16241.1

>prot_Ecto-sp13_S_contig58.16241.1 ID=prot_Ecto-sp13_S_contig58.16241.1|Name=mRNA_Ecto-sp13_S_contig58.16241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=403bp
MASCLRARRLFTRIRTVLSPSMALHSNMQIIRLLSGRATTQGITTTTAIL
SSTRRTRQPQAIRGEQKETRALDQRSAATHKSEVPAGLVTRQEVPQPQTI
GNGSHRGSPDLAKHRSAPPTSKEAEPRTEEPGDDGAWPSSLRRYLQRAFD
KCDKKQGSRQHAQLEKALHRKVTDAMAENALLTKDWDNEPLPSLVASKRE
RSPSRGEGRNRQGEKNKKRNHGQIEARAAATPRKGKGSLSKMPQADQRRL
SNRLERFDLGMRPPPSSSSRSGNDLAFQSKPMVDDNGMVDWAAITIKGTS
TKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQL
KAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQARLMF
AL*
back to top

mRNA from alignment at Ecto-sp13_S_contig58:18668..22465-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig58.16241.1 ID=mRNA_Ecto-sp13_S_contig58.16241.1|Name=mRNA_Ecto-sp13_S_contig58.16241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig58:18668..22465- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGAGACTCCTAACCCCCCGGCGCCTCCTATTCCTCCGCCGCCCCCA CCCGACCCTCCCACGCCCTCTGCTGTTCAACCGGGAGCTCAGATGAGCTA CCCCGCGCCACCTCCTGGCCCGACTGGCGGAGGCCCAAATGGCATCATGC CTCCGGGCGCGCCGGCTTTTTACCAGGATCCGTACAGTTCTTTCTCCCAG TATGGCGCTGCACAGCAATATGCAGATAATCAGGTACGAATAGATAACAC GAGCTGGGAGCTGTGTAGCTGAATGTATCCCTTGAAGGTATTCGATGCGC GCTCCATCTCTCCTGCTTGTTCCTAGTAATAGCTCTGTTGTGATAACGTG TGGAATACATACCCTGTACAGCAGACTCGCATGGTTGCGTATCCATCCTC ATGTGTAGCGTTAGTTTGTATTATTCATCCTGCGGGCACACGAGCGTGTG TGTCATGTAAATTGACCGTGGCCGGTAGGCCGGGAGGCGCATCATATGAT ACATACAGCCTGACAGTGACCGGTTCTTGTCGAGGTTGTTTTTCAAGATC CAGCTCTATTGGACCTTTCGCTCCCTCGATCACATCGCAGTGGAAGCCAT CTTCGAGCATATGGAGTGCATGTTTGCGTTGAACTACAAGCTGTCCTCTA GCTCGCCCACGTGCTGTGACCTTTTTATTCTGGCGGAAGAGTTGTATGGC AAGTCGATTTAATTTTGCCTACAATGCAGCGTTTTCCCTACTCCGCCATA CTACATCATTACCCCCAGGCTTCTCAGTGGGCGGGCTACTACCCAGGGTA TAACTACAACAACGGCCATCCTCAGCAGTACCAGGCGTACCCGCCAACCC CAAGCTATCAGGGGTACGTCCAAGATGCGCATCAGGAGCAATTTGGGCAA CAGGCTTATGCCCAGCAGTGGCCAGGGTATGCAACTGCTGTACCTCAACC TCAGCCGGTTGCTCCTCAAGCTTACCCGGCCCAGGCCCCTCACCTGCAAG GTCAACCATATCTGCCGACCCCCGAGATAGCGCAGCCGCCAGTACCGGCA CAAGCACCAGGTATTGCGGCACCGTTGCCCCCCCCCCCCCCCCCCCCCCG CCCCCTCCTCCCGATGCAGGTGAACAAAAGGAGACGCGTGCGCTCGACCA ACGTTCTGCTGCTACCCACAAGTCAGAGGTACCCGCGGGTCTGGTCACTA GGCAAGAGGTGAACGCCAAGAAAGAGTAGGAGCGCGAAATTGCCATGCAT GCCGAGTGCAACCGATAAAAAAATCCACGCCTCCTTCTGCTGTGTATTGG GAATTGACGTCGTTGCGTGATTCCCTGCGAATTTTGTTATCTGCTGTGCG AAGATATAAGGTAAGTAGTGTTGAAACGAAATGCTTCGCCATGGTTCTCT TCCTACCCCAGGTTCCCCAGCCGCAAACAATTGGGAATGGCAGCCACCGG GGCAGTCCTGACCTTGCCAAACACAGGAGTGCGCCGCCTACCTCAAAGGA AGCTGAGCCTCGCACGGAGGAGCCCGGAGACGACGGGGCTTGGCCATCCT CGCTCAGGCGCTACCTGCAGCGAGCATTCGATAAGTGCGACAAAAAGCAA GGTTCGAGGCAACATGCGCAGCTCGAGAAGGCCTTGCACCGCAAGGTGAC GGACGCCATGGCAGAAAACGCCCTGCTCACAAAAGATTGGGACAACGAGC CGCTGCCTAGGTACGGAAGGGGTTCATCTGCTGTCGAATGAGCCAAAAAA ACAATACGGTTAGACGATTGACAACATCGAAAACCCGTTTCATCGCCTGA TGCTAGAAGAGTGCGCTGTTTTGAATTGTAGCAAGATCTATTTGAGCGGA TGCTGTCGCCCGTGTATTTTTGCTCTGTATCAGCTTGGTGGCCTCCAAGA GAGAGCGGTCTCCTTCGCGGGGAGAGGGGCGAAATCGCCAAGGGGAGAAG AACAAGAAGCGAAAGTGAGTCAAGGCCGCTTTTCGCGCGCTGTCGGTTCT CTGTGCAGGCCGCAGGCCTCACGCAACGTGCAGCTCCATGTAGTCAATCG GCAGTGGAGTCTAACCGTACTTGTCTCTGTTACATGGTGTGCTTTTGTGC CGTTCCTCATGATCCTCGGCGGTTGCTCTGGCTGTTGTTTTGTTGCAGTC ACGGTCAGATCGAGGCGCGCGCAGCAGCTACCCCACGAAAGGGCAAAGGT TCCCTTTCCAAGATGCCTCAGGCGGACCAGCGACGGTTGTCTAACCGCCT CGAGAGGTTCGATCTGGGGATGCGCCCACCGCCGTCTTCGTCGTCGCGGT CGGGGAATGATCTGGCGTTCCAGAGCAAGCCGATGGTAGACGACAACGGT ATGGTGGATTGGGCCGCGATCACAATCAAGGGGACATCGACCAAACTCGA GAAGGACTACCTGAGGTTGACTCAGGTTCGGCGACCACATGTCTCAGTCT ATGGGCCCGGTCTGCAAATACCGTATCTGATGTGCTTTTGAGTTGCATAT GGGTAATTACGGGTAGCGGCCGTATCTCGATGTGCGTTGCGCGTTCCCTC GCGCCGTTCTTGCGCTGAGTCGGCTTCGTAGGGCTTGGTTTGTGCGCATG GGACAGGGCAATCCTCGTCCCCAACGTTACCCTGCAGTTGGCACATGGAC CCTAGCAACTGTTTTGTGGGAGGAGATCGTTGATGGAAGTCGCCCGTGCT GAGCAAAGCAGTGTCTCCCGCGTCGTGTTCAGAAGTGCAACATGCCCCAC CCACTTGAACGGGATAGCGTGTTCACAATCAATCTGTAGCAGGTCTCAAT ATTTGATTGTTCAAGTTCCAGGTACGCATCGAAACCAGAGCGTGCGCGTA TTTGCGACATCTTGAATAATCCAGTGGCACCTCGAGATAAGGTGTAATCC TCCACCTGCACTACGAGAAGCCTTTCACCGAAATCTAGGGCCCTGAAGGC TGCAAATGTTACCTAAGAATGCAAGCAATGTCACGAGAGGGAGAGGCCGT GGAATTGGACTTTTGTGTTGTCCACTGATTCAACACAAAGGCCCGGAGTA ATCAGCCTATCCTGACCCATCAGCAACGTCTTGGTTCGCACGCTAACACA GCCTCCAGACCCAGCGAGCGTGCGTCCACAATCTATCCTGGAGAAGAGCT TAGAAAACATCTCTGCCAAGTGGGCGAAAGGAGGACTGGACTACATCTAT GCCTGCTCGCAACTGAAGGCTATCCGTCAGGATTGTGTTGTCCAGCGGAT AAAGAACGCCTTCACGGTACAGGTTTACGAAGGGCACGCTCGGATTGCTC TGCAGCAGGGGGATCTAAACGAGGTAATGAGATGATGAACAGGACGTTCA GTAGCAATAGAAACGAGGCGAAGGTGGAAGGATTGCACTTTTTCGACGCA GGAACAGGCAGGCACGCAAGCTTATACTCACTCCGAGATTATTCTGCCAT GTAGGTCATCCATGCTATATACCCCGTCGACCTCGCGTCTTGTAAAACAT GCCGTGAGATTCTCGGTAGAGATCGACTCAGGCTGTTACCAGTCGCACCA GCGTGATCGCGCGGATGGTCGAATCCACTAGTCGCCGAAGCGCTTTTTTC TGTGATCGACACAACTCTCTTGGGCCTGACCAACCCGTGCCCCCACTGAG AACGACAACTCCCGCCACACCCTGCTGCCTTTGCTTGGATTGCTCTGTCT CGACCCGCTGGCCTCGTCGCCCGTGGCCCCCTTGACCCCACCACCAGTAC AACCAGTGCCAAACTCAGCTCCAGGCAAGGTTAATGTTCGCCCTCTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig58:18668..22465-

>mRNA_Ecto-sp13_S_contig58.16241.1 ID=mRNA_Ecto-sp13_S_contig58.16241.1|Name=mRNA_Ecto-sp13_S_contig58.16241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig58:18668..22465- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCATCATGCCTCCGGGCGCGCCGGCTTTTTACCAGGATCCGTACAGT
TCTTTCTCCCAGTATGGCGCTGCACAGCAATATGCAGATAATCAGGCTTC
TCAGTGGGCGGGCTACTACCCAGGGTATAACTACAACAACGGCCATCCTC
AGCAGTACCAGGCGTACCCGCCAACCCCAAGCTATCAGGGGTGAACAAAA
GGAGACGCGTGCGCTCGACCAACGTTCTGCTGCTACCCACAAGTCAGAGG
TACCCGCGGGTCTGGTCACTAGGCAAGAGGTTCCCCAGCCGCAAACAATT
GGGAATGGCAGCCACCGGGGCAGTCCTGACCTTGCCAAACACAGGAGTGC
GCCGCCTACCTCAAAGGAAGCTGAGCCTCGCACGGAGGAGCCCGGAGACG
ACGGGGCTTGGCCATCCTCGCTCAGGCGCTACCTGCAGCGAGCATTCGAT
AAGTGCGACAAAAAGCAAGGTTCGAGGCAACATGCGCAGCTCGAGAAGGC
CTTGCACCGCAAGGTGACGGACGCCATGGCAGAAAACGCCCTGCTCACAA
AAGATTGGGACAACGAGCCGCTGCCTAGCTTGGTGGCCTCCAAGAGAGAG
CGGTCTCCTTCGCGGGGAGAGGGGCGAAATCGCCAAGGGGAGAAGAACAA
GAAGCGAAATCACGGTCAGATCGAGGCGCGCGCAGCAGCTACCCCACGAA
AGGGCAAAGGTTCCCTTTCCAAGATGCCTCAGGCGGACCAGCGACGGTTG
TCTAACCGCCTCGAGAGGTTCGATCTGGGGATGCGCCCACCGCCGTCTTC
GTCGTCGCGGTCGGGGAATGATCTGGCGTTCCAGAGCAAGCCGATGGTAG
ACGACAACGGTATGGTGGATTGGGCCGCGATCACAATCAAGGGGACATCG
ACCAAACTCGAGAAGGACTACCTGAGGTTGACTCAGCCTCCAGACCCAGC
GAGCGTGCGTCCACAATCTATCCTGGAGAAGAGCTTAGAAAACATCTCTG
CCAAGTGGGCGAAAGGAGGACTGGACTACATCTATGCCTGCTCGCAACTG
AAGGCTATCCGTCAGGATTGTGTTGTCCAGCGGATAAAGAACGCCTTCAC
GGTACAGGTTTACGAAGGGCACGCTCGGATTGCTCTGCAGCAGGGGGATC
TAAACGAGTACAACCAGTGCCAAACTCAGCTCCAGGCAAGGTTAATGTTC
GCCCTCTGA
back to top