mRNA_Ecto-sp13_S_contig57906.16230.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig57906.16230.1
Unique NamemRNA_Ecto-sp13_S_contig57906.16230.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: D7FZS6_ECTSI (Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZS6_ECTSI)

HSP 1 Score: 572 bits (1473), Expect = 1.280e-203
Identity = 281/286 (98.25%), Postives = 283/286 (98.95%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVTFAPCML+TEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQV  +
Sbjct:   50 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGCLKPGMVVTFAPCMLDTEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVIVM 335
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: A0A836CC12_9STRA (Elongation factor 1-alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC12_9STRA)

HSP 1 Score: 504 bits (1299), Expect = 4.100e-177
Identity = 247/286 (86.36%), Postives = 264/286 (92.31%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GKSSFKYAWVLDNLKAERERGITIDIALWKFE+PK+N+TVIDAPGHRDFIKNMITGTSQADVA+LVVASGVGEFEAGISK+GQTREHALLA+TLGVKQMIVCINKMDDSSVMYGE RY EIKEEV  YLKKVGYKP KIPFVPISGWAGDNMI++S NMPWYKGP+LLEALD+   P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVV FAP  + TEVKSVEMHHE++ EA+PGDNVGFNVKNVSVKDIRRG VAGDSK DPP GA+ F+AQV  +
Sbjct:   50 GKSSFKYAWVLDNLKAERERGITIDIALWKFETPKFNYTVIDAPGHRDFIKNMITGTSQADVAMLVVASGVGEFEAGISKDGQTREHALLAYTLGVKQMIVCINKMDDSSVMYGEARYNEIKEEVTNYLKKVGYKPVKIPFVPISGWAGDNMIERSENMPWYKGPFLLEALDSCMPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPTGVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPVGAANFHAQVIVM 335
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: A0A076FLX3_PHYCP (Elongation factor 1-alpha (Fragment) n=208 Tax=Eukaryota TaxID=2759 RepID=A0A076FLX3_PHYCP)

HSP 1 Score: 501 bits (1291), Expect = 5.290e-177
Identity = 246/286 (86.01%), Postives = 256/286 (89.51%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GK+SFKYAWVLDNLKAERERGITIDIALWKFESPKY FTVIDAPGHRDFIKNMITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQMIV INKMDDSSVMYG+ RY EIK EV  YLKKVGYKPAKIPFVPISGW GDNMID+STNMPWYKGPYLLEALD +  P RP DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TF P  L TEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVK++RRG+VA DSK DP KG   F AQV  L
Sbjct:    9 GKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNAPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQDFTAQVIVL 294
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: H3G8M4_PHYRM (Elongation factor 1-alpha n=42 Tax=Peronosporaceae TaxID=4777 RepID=H3G8M4_PHYRM)

HSP 1 Score: 501 bits (1289), Expect = 1.410e-175
Identity = 246/286 (86.01%), Postives = 257/286 (89.86%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GK+SFKYAWVLDNLKAERERGITIDIALWKFESPKY FTVIDAPGHRDFIKNMITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQMIV INKMDDSSVMYG+ RY EIK EV  YLKKVGYKPAKIPFVPISGW GDNMI+KS NMPWYKGPYLLEALDT+  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TF P  L TEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVK++RRG+VA DSK DP KG   F AQV  L
Sbjct:   50 GKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDTLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQDFTAQVIVL 335
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: A0A1P8L1Z5_9STRA (Elongation factor 1-alpha (Fragment) n=8 Tax=Phytophthora TaxID=4783 RepID=A0A1P8L1Z5_9STRA)

HSP 1 Score: 497 bits (1279), Expect = 1.450e-175
Identity = 243/286 (84.97%), Postives = 256/286 (89.51%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GK+SFKYAWVLDNLKAERERGITIDIALWKFESPK+ FTVIDAPGHRDFIKNMITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQMIV INKMDDSSVMYG+ RY EIK EV  YLKKVGYKPAKIPFVPISGW GDNMI+KS NMPWYKGPYLLEALD +  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGM+ TF P  L TEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVK++RRG+VA DSK DP KG   F AQV  L
Sbjct:    4 GKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSPNMPWYKGPYLLEALDNLNPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIATFGPVGLTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQDFTAQVIVL 289
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: W7T3J7_9STRA (Elongation factor 1-alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3J7_9STRA)

HSP 1 Score: 499 bits (1286), Expect = 4.170e-175
Identity = 242/286 (84.62%), Postives = 261/286 (91.26%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GKSSFKYAWVLD LKAERERGITIDIALWKFESPKY FT+IDAPGHRDFIKNMITGTSQADVA+L+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIVC+NKMDDSSV YGE R+ EIKEEV+ YLKKVGYKPAK+PF+PISGW GDNMID+STNM WYKGP LLEALD +  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVT AP M+ TEVKSVEMHHE++ EA+PGDNVGFNVKNVSVK+IRRGYVAGDSK+DPP GA+ F AQV  +
Sbjct:   50 GKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVM 335
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: A0A485KD22_9STRA (Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID=2759 RepID=A0A485KD22_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 6.570e-175
Identity = 244/286 (85.31%), Postives = 257/286 (89.86%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GKSSFKYAWVLDNLKAERERGITIDIALWKFESPK+ FTVIDAPGHRDFIKNMITG S+AD A+LVVASGVGEFEAGISK+GQTREHALLAFTLGV+QMIV INKMDDSSVMYGE RY EIKEEV  YLKKVGYKPAKIPFVPISGW GDNMI+KS NMPWYKGPYLLEALD +  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVV F P  L TEVKSVEMHHE++PEAVPGDNVGFNVKN+SVK++RRG+VA DSK DP KG   F AQV  L
Sbjct:   50 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGPSKADAAILVVASGVGEFEAGISKDGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGESRYNEIKEEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSANMPWYKGPYLLEALDGLNPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFGPSGLSTEVKSVEMHHESMPEAVPGDNVGFNVKNISVKELRRGFVASDSKNDPAKGTETFTAQVIVL 335
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: A0A7S3ZS59_9STRA (Elongation factor 1-alpha (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZS59_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 8.670e-175
Identity = 243/286 (84.97%), Postives = 256/286 (89.51%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GK+SFKYAWVLDNLKAERERGITIDIALWKFESPK+ FTVIDAPGHRDFIKNMITGTSQAD+A+LV+ S VG FEAGISK+GQTREHALLAFTLGVKQMIV  NKMDD SV YGE RY EIK EV+ YLKKVGYKP KIPFVPISGW GDNMIDKSTNMPWYKGPYLLEALD    P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TFAP  + TEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVKDIRRG V GDSK+DPPKGAS F AQV  +
Sbjct:   55 GKASFKYAWVLDNLKAERERGITIDIALWKFESPKFYFTVIDAPGHRDFIKNMITGTSQADIAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVACNKMDDVSVKYGEGRYKEIKAEVSTYLKKVGYKPMKIPFVPISGWMGDNMIDKSTNMPWYKGPYLLEALDNANPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVCTFAPVQITTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGNVCGDSKKDPPKGASTFFAQVIVM 340
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: A0A6A4AWL9_9STRA (Elongation factor 1-alpha (Fragment) n=389 Tax=Oomycota TaxID=4762 RepID=A0A6A4AWL9_9STRA)

HSP 1 Score: 495 bits (1275), Expect = 9.060e-175
Identity = 243/286 (84.97%), Postives = 256/286 (89.51%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL 858
            GK+SFKYAWVLDNLKAERERGITIDIALWKFESPK+ FTVIDAPGHRDFIKNMITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQM+V INKMDDSSVMYG+ RY EIK EV+ YLKKVGYKPAKIPFVPISGW GDNMI+KS NMPWYKGPYLLEALD +  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TF P  L TEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVK++RRGYVA DSK DP K    F AQV  L
Sbjct:   25 GKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMVVAINKMDDSSVMYGQARYEEIKSEVSTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDNLNPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKATQDFLAQVIVL 310
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BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Match: F0Y4T9_AURAN (Elongation factor 1-alpha n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4T9_AURAN)

HSP 1 Score: 497 bits (1280), Expect = 3.650e-174
Identity = 244/283 (86.22%), Postives = 257/283 (90.81%), Query Frame = 1 
Query:    1 GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQV 849
            GK+SFKYAWVLDNLKAERERGITIDIALWKFESPK+ FTVIDAPGHRDFIKNMITGTSQADVA+LV+ S VG FEAGISK+GQTREHALLAFTLGVKQMIV  NKMDD SV YGE RY EIK+EV+ YLKKVGYKP KIPF+PISGWAGDNMIDKSTNM WYKGPYLLEALD    P RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVTFAP  L TEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVKD+RRG+V GDSK+DPPKGA  F AQV
Sbjct:   50 GKASFKYAWVLDNLKAERERGITIDIALWKFESPKFYFTVIDAPGHRDFIKNMITGTSQADVAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVACNKMDDVSVKYGEARYKEIKQEVSGYLKKVGYKPMKIPFIPISGWAGDNMIDKSTNMGWYKGPYLLEALDNCNPPKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDLRRGFVCGDSKQDPPKGADTFFAQV 332
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57906.16230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZS6_ECTSI1.280e-20398.25Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID... [more]
A0A836CC12_9STRA4.100e-17786.36Elongation factor 1-alpha n=2 Tax=Tribonema minus ... [more]
A0A076FLX3_PHYCP5.290e-17786.01Elongation factor 1-alpha (Fragment) n=208 Tax=Euk... [more]
H3G8M4_PHYRM1.410e-17586.01Elongation factor 1-alpha n=42 Tax=Peronosporaceae... [more]
A0A1P8L1Z5_9STRA1.450e-17584.97Elongation factor 1-alpha (Fragment) n=8 Tax=Phyto... [more]
W7T3J7_9STRA4.170e-17584.62Elongation factor 1-alpha n=2 Tax=Monodopsidaceae ... [more]
A0A485KD22_9STRA6.570e-17585.31Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID... [more]
A0A7S3ZS59_9STRA8.670e-17584.97Elongation factor 1-alpha (Fragment) n=1 Tax=Pelag... [more]
A0A6A4AWL9_9STRA9.060e-17584.97Elongation factor 1-alpha (Fragment) n=389 Tax=Oom... [more]
F0Y4T9_AURAN3.650e-17486.22Elongation factor 1-alpha n=3 Tax=Pelagomonadales ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57906contigEcto-sp13_S_contig57906:1..858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score575.1
Seed ortholog evalue1.8e-161
Seed eggNOG ortholog2880.D7FZS6
Preferred nameTEF1
Model size858
KEGG koko:K03231
KEGG Pathwayko03013,ko05134,map03013,map05134
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000302,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001882,GO:0001883,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003779,GO:0003785,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005516,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005853,GO:0005938,GO:0006403,GO:0006405,GO:0006409,GO:0006412,GO:0006414,GO:0006469,GO:0006518,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007154,GO:0007165,GO:0008092,GO:0008104,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009268,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010446,GO:0010467,GO:0010563,GO:0010605,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019220,GO:0019222,GO:0019538,GO:0019722,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030036,GO:0030175,GO:0031090,GO:0031143,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031503,GO:0031667,GO:0031668,GO:0031669,GO:0032268,GO:0032269,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033554,GO:0033673,GO:0034198,GO:0034613,GO:0034641,GO:0034645,GO:0035556,GO:0035639,GO:0036094,GO:0042221,GO:0042325,GO:0042326,GO:0042594,GO:0042886,GO:0042995,GO:0043021,GO:0043022,GO:0043043,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045859,GO:0045936,GO:0046907,GO:0048519,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051015,GO:0051017,GO:0051020,GO:0051031,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061572,GO:0065007,GO:0065009,GO:0070727,GO:0071166,GO:0071426,GO:0071431,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0097064,GO:0097159,GO:0097367,GO:0097435,GO:0098588,GO:0098805,GO:0098852,GO:0098858,GO:0099568,GO:0120025,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904,GO:1990928
Exons1
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG5256@1,KOG0052@2759
Cds size858
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko03016,ko03019,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463802.4764125-CDS-Ecto-sp13_S_contig57906:0..8581681463802.4764125-CDS-Ecto-sp13_S_contig57906:0..858Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig57906 1..858 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57906.16230.1prot_Ecto-sp13_S_contig57906.16230.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig57906 1..858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig57906.16230.1

>prot_Ecto-sp13_S_contig57906.16230.1 ID=prot_Ecto-sp13_S_contig57906.16230.1|Name=mRNA_Ecto-sp13_S_contig57906.16230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=286bp
GKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFI
KNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMI
VCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGD
NMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGT
VPVGRVETGALKPGMVVTFAPCMLETEVKSVEMHHEALPEAVPGDNVGFN
VKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVCAL
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mRNA from alignment at Ecto-sp13_S_contig57906:1..858+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig57906.16230.1 ID=mRNA_Ecto-sp13_S_contig57906.16230.1|Name=mRNA_Ecto-sp13_S_contig57906.16230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=858bp|location=Sequence derived from alignment at Ecto-sp13_S_contig57906:1..858+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAAGTCCTCGTTCAAGTACGCGTGGGTGCTTGACAACCTCAAGGCCGA
GCGCGAGCGCGGTATCACGATCGACATCGCCCTGTGGAAGTTCGAGTCGC
CCAAGTACAACTTCACGGTGATCGACGCCCCCGGCCACCGCGACTTCATC
AAGAACATGATCACCGGCACCTCGCAGGCCGATGTGGCCGTGCTGGTCGT
GGCGTCGGGGGTGGGAGAGTTCGAGGCGGGTATCTCGAAGAACGGGCAGA
CTCGCGAGCACGCGCTGCTGGCCTTCACCCTGGGCGTGAAGCAGATGATC
GTGTGCATCAACAAGATGGACGACTCTTCGGTGATGTACGGCGAGCCCCG
GTACACGGAGATCAAGGAGGAGGTTGCGATCTACCTGAAGAAGGTGGGGT
ACAAGCCCGCGAAGATCCCGTTCGTGCCTATCTCGGGCTGGGCCGGCGAT
AACATGATCGACAAGTCGACCAACATGCCGTGGTACAAGGGCCCCTACCT
GCTGGAGGCGCTCGACACGATGAAGGAGCCCACCCGCCCCACGGACAAGC
CCCTCCGCTTGCCGCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACG
GTGCCCGTGGGCCGTGTGGAGACGGGTGCCCTCAAGCCCGGCATGGTGGT
GACGTTCGCCCCCTGCATGCTCGAAACCGAAGTGAAGTCCGTGGAGATGC
ACCACGAGGCTCTCCCGGAGGCGGTGCCCGGAGACAACGTCGGCTTCAAC
GTGAAGAACGTGTCCGTCAAGGACATCCGCCGTGGCTACGTGGCGGGTGA
CTCGAAGAGGGACCCCCCTAAGGGCGCCTCGGCCTTCAACGCTCAGGTTT
GTGCACTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig57906:1..858+

>mRNA_Ecto-sp13_S_contig57906.16230.1 ID=mRNA_Ecto-sp13_S_contig57906.16230.1|Name=mRNA_Ecto-sp13_S_contig57906.16230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=858bp|location=Sequence derived from alignment at Ecto-sp13_S_contig57906:1..858+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAAGTCCTCGTTCAAGTACGCGTGGGTGCTTGACAACCTCAAGGCCGA
GCGCGAGCGCGGTATCACGATCGACATCGCCCTGTGGAAGTTCGAGTCGC
CCAAGTACAACTTCACGGTGATCGACGCCCCCGGCCACCGCGACTTCATC
AAGAACATGATCACCGGCACCTCGCAGGCCGATGTGGCCGTGCTGGTCGT
GGCGTCGGGGGTGGGAGAGTTCGAGGCGGGTATCTCGAAGAACGGGCAGA
CTCGCGAGCACGCGCTGCTGGCCTTCACCCTGGGCGTGAAGCAGATGATC
GTGTGCATCAACAAGATGGACGACTCTTCGGTGATGTACGGCGAGCCCCG
GTACACGGAGATCAAGGAGGAGGTTGCGATCTACCTGAAGAAGGTGGGGT
ACAAGCCCGCGAAGATCCCGTTCGTGCCTATCTCGGGCTGGGCCGGCGAT
AACATGATCGACAAGTCGACCAACATGCCGTGGTACAAGGGCCCCTACCT
GCTGGAGGCGCTCGACACGATGAAGGAGCCCACCCGCCCCACGGACAAGC
CCCTCCGCTTGCCGCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACG
GTGCCCGTGGGCCGTGTGGAGACGGGTGCCCTCAAGCCCGGCATGGTGGT
GACGTTCGCCCCCTGCATGCTCGAAACCGAAGTGAAGTCCGTGGAGATGC
ACCACGAGGCTCTCCCGGAGGCGGTGCCCGGAGACAACGTCGGCTTCAAC
GTGAAGAACGTGTCCGTCAAGGACATCCGCCGTGGCTACGTGGCGGGTGA
CTCGAAGAGGGACCCCCCTAAGGGCGCCTCGGCCTTCAACGCTCAGGTTT
GTGCACTT
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