mRNA_Ecto-sp13_S_contig579.16228.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: D7FM68_ECTSI (Procaryotic DNA polymerase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM68_ECTSI) HSP 1 Score: 880 bits (2274), Expect = 0.000e+0 Identity = 458/485 (94.43%), Postives = 467/485 (96.29%), Query Frame = 1
Query: 1 MRNPSLAAAAVALGLTTFFAKRSSRLVKALVPAACHHNHVRRSAARSRSSLGASKGAGGVAERIHQIAGREFDIGKPSVLAKVLYDDMSVFNPQAGRPAELTAAGRPKARSVSVKTLSAVLEAERDPAKRELVELVLRWLDAKTVAKRGGFVASGEKVADIPSWSSRLIPDDDELPADPSASPVVIVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLLGVN 1455
MRNPSLAAA VALGLTTFFAKRSSRLVKALVPAAC H+HV RSAARSRSSLGASK AGGVAERIHQIAGREFDIGKPSVLAKVLYD+MSVFNPQAG A LTAAGRPK RSVSVKTLSAVLEAERDPAKREL+ELVLRWLDAK VAKRGGFVA+GEKV DIPSWSSRLIPDDDELPADPSASPVV+VDGHYITYRSFHGMPHLSAADGTPVGALVGFCN MNKLVVQPWAEGVERR+KVVVVFDTGDDNFRHDLSPSYKK RTETPE LRPQFALVRKACEAYGLETIEGPG+EGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVG EGYGPVKAAKVLAKHETLEAAVDEIC TISKK EDPEL+AKTR+QVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEG AERLLAFMRRFEMDELS RTSRLLGVN
Sbjct: 1 MRNPSLAAATVALGLTTFFAKRSSRLVKALVPAACRHHHVDRSAARSRSSLGASKSAGGVAERIHQIAGREFDIGKPSVLAKVLYDEMSVFNPQAGSKAALTAAGRPKPRSVSVKTLSAVLEAERDPAKRELIELVLRWLDAKAVAKRGGFVAAGEKVVDIPSWSSRLIPDDDELPADPSASPVVLVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNTMNKLVVQPWAEGVERRQKVVVVFDTGDDNFRHDLSPSYKKHRTETPEALRPQFALVRKACEAYGLETIEGPGYEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGAEGYGPVKAAKVLAKHETLEAAVDEICSTISKKIEDPELVAKTREQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGAAERLLAFMRRFEMDELSLRTSRLLGVN 485
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A7S2VW30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VW30_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.080e-48 Identity = 141/442 (31.90%), Postives = 223/442 (50.45%), Query Frame = 1
Query: 178 VAERIHQIAGREFDIGKPSVLAKVLYDDMSVFNPQAGRPAELTAAGRPKARSV-SVKTLSAVLEAERDPAKRELVELVLRWLDAKTVAKRGGFVASGEKVADIPSWSSRLIPDDDELPADPSASPVVIVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRR-----VNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLLGVN*AGRPPPRGV 1485
+ + I+Q+AG+EF++ P+ L VLY + + + AG P A V + L + ++ + +R +VE R L A+ +R + + P+ D P++++D +R+++ MP L +DGTP GA++GFCN +N+LV++ G R ++ +VFD DNFRH + YK R P DL PQF L+R AYG++ IE G+E DDVIA+L++ G NV +VS+DKDL QLVT V++++ R+ V K+ P +L D+LA+AGD +D + G++G GP A+ ++ ++ LE + KK EL+ + ++ L+RRLVEL T V + G++ + V +E E ERLL F +L R G+ GR P G
Sbjct: 123 ITDEIYQMAGKEFNLNSPTQLGLVLYGIKNGGSTAKETLEAMAGAGNPLAGKVLKYRALKSSIKRQEKQEER-MVER--RKLAAQNEERRA---TATPTASSTPNLKDNFTSGRD---------PLLLIDASAYIFRAYYAMPPLHRSDGTPTGAVLGFCNMLNRLVMERLLRG--ERPRLAMVFDAKGDNFRHKIYSEYKANRPPCPIDLVPQFPLIRSLASAYGVQQIEASGYEADDVIATLSVRGRKEGV-NVNVVSSDKDLMQLVTPMGEEPSVHLIDPMKQIRVDENVVRDKWGVGPEKLGDVLALAGDSADNVPGIKGIGPKIASALIEEYGDLEGLLKGAEGIKQKKRR--ELLVEGKEVARLSRRLVELVTDVSEEHIVGMEGV-DVSELRME-ELNEERLLNFYEEMGFRDLRKRMKNRFGIE--GRRPSTGT 540
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A1H0IPQ9_9HYPH (DNA polymerase I n=2 Tax=Aureimonas TaxID=414371 RepID=A0A1H0IPQ9_9HYPH) HSP 1 Score: 191 bits (486), Expect = 3.990e-47 Identity = 134/353 (37.96%), Postives = 188/353 (53.26%), Query Frame = 1
Query: 556 IVDGHYITYRSFHGMPHLSA-ADGTPVGALVGFCNAMNKLVVQPWAEGVE-RRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLLGVN*AGRPP--------PRGVFFSSHGTTNSSPSLKRVWDRLAKNSQRWISSGA 1584
+VDG +R++H +P LS +DG PVGA+ GFCN + KLV + V V+FD FR++L +YK R PEDLRPQF+L+R A A+ L +E GFE DD+IA+ AV G +VTIVS+DKDL QLV V + + +RLG +EV KF P ++ DL A+ GD SD + GV G GP AA +L + TLEA ++ + K+ + E+I +Q L++RLV L VPL GL L F E +G E+L+AF++ E L+ R S LG + A P PRG + T S P + + A ++Q ++ A
Sbjct: 9 LVDGSAYIFRAYHALPPLSRKSDGLPVGAVAGFCNMLWKLVEEARETEVGVAPTHFAVIFDHSSTTFRNELYDAYKANRAAPPEDLRPQFSLIRDAVRAFDLPCVERQGFEADDLIATYTRLAVEAGG-DVTIVSSDKDLMQLVGPGVTLYDQMKDKRLGAQEVFEKFGVYPEKMIDLQALVGDSSDNVPGVPGIGPKTAAGLLDQFGTLEALLERT--SEIKQQKRREVIEANAEQARLSKRLVTLDQNVPLADGEGLDDL-----FIHEPDG--EKLVAFLKAMEFTTLTRRVSAKLGTDIADVAPAKVAVEAAPRGPDLDASWTDASGPRVGNLELSPAAHAQARLAEAA 351
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: B8C0P9_THAPS (53EXOc domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0P9_THAPS) HSP 1 Score: 177 bits (449), Expect = 5.020e-47 Identity = 103/254 (40.55%), Postives = 154/254 (60.63%), Query Frame = 1
Query: 550 VVIVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLD 1311
++++D +RS+H +P L +DGTP GAL G C + L++ +G R +VV+ FD NFRH++ P YK R PEDL PQF LVR+A EA+G+ +E G+E DDVIA+LA +A+ G +V I+S DKDL QL+T V+M++ +R+ ++V+ K+ +L D+LA+AGD SD I GV G GP AA ++ ++ +L + + I +K LI K V+L R+LV L T+P+D
Sbjct: 1 LLLIDASAYIFRSYHAIPPLHRSDGTPTGALHGVCRMLQNLLLSRLLKG--DRPRVVLAFDFKGPNFRHEIYPEYKANRGPCPEDLVPQFELVREAAEAFGIVQVEAEGYEADDVIATLARQALEEGV-DVDILSGDKDLMQLITPPVHMIDSTHFDRVTHDDVVEKWNVDSAKLGDVLALAGDSSDNIPGVPGIGPKIAAMLINEYGSLSELISQ-AENIKQKKRRESLIENAEK-VILFRQLVTLNETIPVD 249
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A258BBL5_9CAUL (DNA polymerase I (Fragment) n=1 Tax=Asticcacaulis sp. 32-58-5 TaxID=1970317 RepID=A0A258BBL5_9CAUL) HSP 1 Score: 177 bits (450), Expect = 6.900e-47 Identity = 106/253 (41.90%), Postives = 153/253 (60.47%), Query Frame = 1
Query: 550 VVIVDGHYITYRSFHGMPHLSA-ADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVP 1305
+V+VDG +R++HG+P L+ +DG PVGA+ GFCN + KL+ + +G + V+FD G FR+DL +YK R PEDL PQF L+R+A A+G+ ++E PGFE DD+IA+ A AV +VTIVS+DKDL QLV RV M+ +G E+V KF PP + D A+ GD +D + G G G AA++LA++ L+A +D K+ + E + + R Q+LL+R LV+L VP
Sbjct: 6 LVLVDGSGYIFRAYHGLPPLTRKSDGLPVGAVSGFCNMLYKLIKENRGDGGPSH--LAVIFDAGSKTFRNDLYEAYKAHRPPAPEDLIPQFPLIREATIAFGVPSVELPGFEADDLIATYARMAVEQDF-DVTIVSSDKDLMQLVNDRVTMMEPVKAVTIGREQVYEKFGVPPELVVDAQALIGDTADNVPGAPGIGVKTAAQLLAEYGNLDALLDR--AHEIKQPKRREALTEFRDQILLSRELVKLRDDVP 253
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A839SWK2_9HYPH (DNA polymerase I n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SWK2_9HYPH) HSP 1 Score: 190 bits (483), Expect = 8.620e-47 Identity = 125/350 (35.71%), Postives = 191/350 (54.57%), Query Frame = 1
Query: 556 IVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLLG----VN*AGRPPPRGVFFSSH------GTTNSSPSLKRVWDRLAKNSQRWIS 1575
+VDG+ +R+F MP ++ DGTP GA GFCN + KL+ + A+ + +V FD FR+++ P YK R ETPEDL PQF +VR+A A+GL+++E G+E DD+IA++A +AV G VT+VS+DKDL QLV V+ML+ +GP+EVL KF P ++ D+ ++AGD +D + GV G G AA+++ ++ +LEA ++ I + LIA +Q ++RRLVEL P++ G +L E E L AF+ ++E L +R + L V P G +S +S PS + V D ++ RW++
Sbjct: 14 LVDGYGYLFRAFFAMPSITRKDGTPTGAAYGFCNMLVKLLRESDADAM------LVTFDASGPTFRNEIYPKYKANRDETPEDLIPQFPMVREAAAAFGLQSLELTGYEADDIIATVARQAVERGI-QVTVVSSDKDLMQLVRPGVSMLDPMKNRPIGPDEVLEKFGVSPDKVVDVQSLAGDSTDNVPGVPGIGIKTAAQLIGEYGSLEALLER-AAEIKQPKRRENLIAFA-EQARISRRLVELTDAAPVEVEWGRLALH---------EPDPETLRAFLDKYEFRSLKARLAEQLEAGDLVPDEREPAKVGAVEASREDGAVPSPESSGPSYELVCD--LESLDRWVA 343
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A7C3LHU9_9BACT (DNA polymerase I (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3LHU9_9BACT) HSP 1 Score: 178 bits (452), Expect = 1.570e-46 Identity = 117/325 (36.00%), Postives = 184/325 (56.62%), Query Frame = 1
Query: 505 IPDDDELPADPSASPVVIVDGHYITYRSFHGMPHLSA-ADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTA-ERLLAFMRRFEMDELSSRTSRLLGVN*AGRPP 1473
IPD + +P S V ++DG +R+FH +P L+ +DG PVGA+ GFC + KL+ ++ +R + V+FD ++ FR+++ YK R PE+L PQF L+R+A +A+ + IE G+E DD+IA+ A +AV GA +VTIVS+DKDL QL+ + ML+ +R+G EEV+ +F P R+AD+ A++GD +D + GV G G AA++L ++ LE+ + K E + + +Q ++++LV L VPL +VP L + ERLL F+RR E + ++ R + LGV P
Sbjct: 13 IPDAEPVPVI-KGSHVYLIDGSGYVFRAFHALPPLTRPSDGLPVGAVHGFCAMLWKLLGD--SKLADRPTHIAVIFDASEETFRNEIYKDYKAHRPPPPEELVPQFPLIREAVQAFNVACIEQFGYEADDLIATYACQAVERGA-DVTIVSSDKDLMQLIRPGIVMLDTMKNKRIGREEVIERFGVEPERVADVQALSGDATDNVPGVPGIGVKTAAELLREYGDLESLLAHASEIRQPKRR--ERLIQFAEQARISKQLVSLKCDVPL----------AVPLERLGVQDPVPERLLGFLRRMEFNTMTRRIADRLGVEVTAEAP 321
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A258XDN3_9PROT (DNA polymerase I n=1 Tax=Alphaproteobacteria bacterium 16-39-46 TaxID=1970490 RepID=A0A258XDN3_9PROT) HSP 1 Score: 187 bits (476), Expect = 6.110e-46 Identity = 113/300 (37.67%), Postives = 170/300 (56.67%), Query Frame = 1
Query: 547 PVVIVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLL 1446
P+++VDG +R++H +P LS +DGTPVGA+ GF + + KL+ + +G VV+FD G FR+D+ P YK R P+DL PQF L R CEA+G+ ++E PGFE DD+IAS EA+ G V I+S DKDL QL++ V++ + + +GP+EVL KF P + D+LA+ GD SD I GV G GP AA ++ + TLE +D I +SK + L+ K L+++L++L VPL + + S+ T ++++F++ L R R L
Sbjct: 6 PLILVDGSGYIFRAYHALPPLSRSDGTPVGAVYGFASMLLKLL-ETEEDGF------VVIFDAGRKTFRNDIYPDYKAHRPPPPDDLIPQFPLTRSVCEAFGVTSLEIPGFEADDLIASYTKEALKKGIP-VKIISGDKDLMQLISSEVSLFDPLKNKIIGPQEVLEKFGVAPLSIIDVLALMGDASDNIPGVPGIGPKGAADLIQRFSTLENLLDHIE-DVSKPSHKKSLLENIEK-ARLSKKLIQLHEDVPLPKPLSDLKIKSIET---------SKIISFLKEQGFQSLIPRVERYL 286
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: A0A7W0MT05_9RHOB (DNA polymerase I (Fragment) n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7W0MT05_9RHOB) HSP 1 Score: 176 bits (446), Expect = 1.180e-45 Identity = 121/320 (37.81%), Postives = 172/320 (53.75%), Query Frame = 1
Query: 556 IVDGHYITYRSFHGMPHLSA-ADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKH---ETLEAAVDEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLLGVN*AGRPPPRGVFFSSHG 1503
++DG +R++H +P L+ +DG PVGA+ GFCN + K+V A+G + V V+FD + FR++ P+YK QR P+DL PQF L+R A A+ L IE GFE DD+IA+ A +A G VTIVSADKDL QLV+ V M + +R+GPEEV KF P R+ D+ A+AGD D + G G G AA ++ ++ +TL A EI T K+ E++ +Q+ ++R LV L P G + L ++ E + LL F+ R E LS R + LG+ PP S G
Sbjct: 15 LIDGSGFIFRAYHALPPLTRKSDGMPVGAVAGFCNMVYKMVED--AKGADAPTHVAVIFDKSERTFRNEFFPAYKAQRPPAPDDLVPQFGLIRDATRAFNLPCIEMEGFEADDIIATYACQARDAGG-RVTIVSADKDLMQLVSPGVEMFDTLKMKRIGPEEVFEKFGVGPERVIDVQALAGDSVDNVPGAPGIGIKTAAGLIQEYGDLDTLLARAGEI--TQPKRR---EVLLGFAEQIRISRDLVTLKCDTP-----GEEPLEALEV----REPDPQMLLDFLARMEFRTLSGRVAAKLGM----APPEAAPAARSSG 313
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Match: UPI00036D90DD (DNA polymerase I n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00036D90DD) HSP 1 Score: 186 bits (473), Expect = 1.500e-45 Identity = 116/303 (38.28%), Postives = 173/303 (57.10%), Query Frame = 1
Query: 550 VVIVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNAMNKLVVQPWAEGVERRRKVVVVFDTGDDNFRHDLSPSYKKQRTETPEDLRPQFALVRKACEAYGLETIEGPGFEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGVEGYGPVKAAKVLAKHETLEAAV---DEICCTISKKNEDPELIAKTRKQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGTAERLLAFMRRFEMDELSSRTSRLLG 1449
V +VDG +R++H +P L+ +DGTPVGA+ GFCN + KL+ +G + + V+FD D FR+++ P+YK R PEDL PQFAL+R+A A+ L IE G+E DD+IA+ A +A GA VTIVS+DKDL QLV R+ +L+ +R GP+EV KF P R+ D+ ++AGD D + GV G G AA+++ + LE + DEI K+ + E + + + ++R+LV L VPL GL++ + + + LL FM+ E L+ R +LG
Sbjct: 13 VYLVDGSGYIFRAYHALPPLTRSDGTPVGAVQGFCNMLWKLLED--LKGADEPSHLAVIFDAKGDTFRNEIYPAYKANRPPAPEDLVPQFALIREATRAFDLPCIELEGYEADDIIATYACQARAQGA-RVTIVSSDKDLMQLVDDRITLLDTMKNKRSGPDEVREKFGVGPNRVIDVQSLAGDSVDNVPGVPGIGIKTAAQLIETYGDLEGLLSHLDEI-----KQPKRREKLMEHAEDARVSRQLVTLKQDVPLSE--GLEAFGAA-------DPHPDNLLPFMKAMEFRTLTRRVQDMLG 298 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig579.16228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig579.16228.1 >prot_Ecto-sp13_S_contig579.16228.1 ID=prot_Ecto-sp13_S_contig579.16228.1|Name=mRNA_Ecto-sp13_S_contig579.16228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=486bp MRNPSLAAAAVALGLTTFFAKRSSRLVKALVPAACHHNHVRRSAARSRSSback to top mRNA from alignment at Ecto-sp13_S_contig579:10724..17254- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig579.16228.1 ID=mRNA_Ecto-sp13_S_contig579.16228.1|Name=mRNA_Ecto-sp13_S_contig579.16228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig579:10724..17254- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig579:10724..17254- >mRNA_Ecto-sp13_S_contig579.16228.1 ID=mRNA_Ecto-sp13_S_contig579.16228.1|Name=mRNA_Ecto-sp13_S_contig579.16228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1458bp|location=Sequence derived from alignment at Ecto-sp13_S_contig579:10724..17254- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |