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Homology
BLAST of mRNA_Ecto-sp13_S_contig5747.16157.1 vs. uniprot
Match: D7G821_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G821_ECTSI) HSP 1 Score: 233 bits (595), Expect = 2.870e-74 Identity = 136/173 (78.61%), Postives = 141/173 (81.50%), Query Frame = 1
Query: 166 SGHGGVGERRAKREEGESSNAQVDRSISSLDADEMDSIARRCKQNSRAASRPQSRPFDAEGLARLRRTIRSVQECTNEEDQRVTSNASKERLESAQRDCMSACLNFISSRGEEPAGDILKAARIFVGKISSTYTDEEIECVKTIRQED*LWFAWLQTEKNQF*FFS-KFPCGQ 681
SG GGVGERRAKREEGESS + RSISS DADEMDSIARRCK N RAASRPQS PF AEGLARLRRTIRSVQ+CTNE Q VTSN SKERLESAQRDCMSACLN ISSRGEEP G ILKAA IFVGKISSTYTDE IE VKTI+ LWFAWLQ E+NQF FP G+
Sbjct: 45 SGRGGVGERRAKREEGESSKS-AGRSISSWDADEMDSIARRCKLNPRAASRPQSGPFGAEGLARLRRTIRSVQQCTNEAGQGVTSNVSKERLESAQRDCMSACLNVISSRGEEPGG-ILKAASIFVGKISSTYTDETIERVKTIK----LWFAWLQIERNQFLILLLNFPAGR 211
BLAST of mRNA_Ecto-sp13_S_contig5747.16157.1 vs. uniprot
Match: A0A6H5JNL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL5_9PHAE) HSP 1 Score: 101 bits (252), Expect = 2.030e-22 Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 232 VDRSISSLDADEMDSIARRCKQNSRAASRPQSRPFDAEGLARLRRTIRSVQECTNEEDQRVTSNASKERLESAQRDCMSACLNFISSRGEEPAGDILKAARIFVGKISSTYTDEEIECVKTIRQED 609
DRSISSL+AD+MD+IA RCK+NSR R + SVQECT E Q VTSNA ++RLESA+ +C + + ISS+G P +L+A +FV KISSTYTDEE++ VKT RQE+
Sbjct: 147 ADRSISSLNADKMDTIAYRCKRNSRTIDRI---------------STSSVQECTAEAGQGVTSNAVRKRLESAKSECKTTHVKAISSKGTRPDA-MLEATNVFVEKISSTYTDEEVDQVKTFRQEE 256
BLAST of mRNA_Ecto-sp13_S_contig5747.16157.1 vs. uniprot
Match: D7FWD8_ECTSI (SUMO deconjugating cysteine peptidase Ulp2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD8_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.500e-18 Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 268 MDSIARRCKQNSRAASRPQ-SRPFDAEGLAR---LRRTIRSVQECTNEEDQRVTSNASKERLESAQRDCMSACLNFISSRGEEPAGDILKAARIFVGKISSTYTDEEIECVKTIR 600
MD+IA R K+NSR R S DAE L +RTI+SV+ECT E VTSNA ++RLESA+ + +ACL ISS+G P IL+AA +FV KISSTYTDE+++ VKT R
Sbjct: 1 MDTIAHRWKRNSRTIDRTSTSGELDAEALRHPTDFQRTIKSVEECTAEAGHGVTSNAWRKRLESAKSEVKTACLKAISSKGTRPDA-ILEAANVFVEKISSTYTDEKVDQVKTFR 114
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 96.7 |
| Seed ortholog evalue | 1.4e-17 |
| Seed eggNOG ortholog | 2880.D7FWD8 |
| Model size | 706 |
| KEGG ko | ko:K08596 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000075,GO:0000278,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006276,GO:0006323,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0016043,GO:0016787,GO:0016926,GO:0016929,GO:0018193,GO:0018205,GO:0019538,GO:0019783,GO:0022402,GO:0030071,GO:0030261,GO:0031577,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051276,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0065007,GO:0070011,GO:0070122,GO:0070138,GO:0070140,GO:0070646,GO:0070647,GO:0071103,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1903047,GO:1905818,GO:1905819,GO:2000816,GO:2001251 |
| Exons | 6 |
| EggNOG free text desc. | protein modification by small protein removal |
| EggNOG OGs | COG5160@1,KOG0779@2759 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-06_009640.1 |
| EC | 3.4.22.68 |
| Cds size | 612 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463796.1472747-UTR-Ecto-sp13_S_contig5747:3196..3290 | 1681463796.1472747-UTR-Ecto-sp13_S_contig5747:3196..3290 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig5747 3197..3290 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463796.1608841-CDS-Ecto-sp13_S_contig5747:3290..3292 | 1681463796.1608841-CDS-Ecto-sp13_S_contig5747:3290..3292 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5747 3291..3292 - |
| 1681463796.1778617-CDS-Ecto-sp13_S_contig5747:3659..3761 | 1681463796.1778617-CDS-Ecto-sp13_S_contig5747:3659..3761 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5747 3660..3761 - |
| 1681463796.1885304-CDS-Ecto-sp13_S_contig5747:4124..4258 | 1681463796.1885304-CDS-Ecto-sp13_S_contig5747:4124..4258 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5747 4125..4258 - |
| 1681463796.1981273-CDS-Ecto-sp13_S_contig5747:5133..5272 | 1681463796.1981273-CDS-Ecto-sp13_S_contig5747:5133..5272 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5747 5134..5272 - |
| 1681463796.2085102-CDS-Ecto-sp13_S_contig5747:8102..8173 | 1681463796.2085102-CDS-Ecto-sp13_S_contig5747:8102..8173 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5747 8103..8173 - |
| 1681463796.2190032-CDS-Ecto-sp13_S_contig5747:8397..8561 | 1681463796.2190032-CDS-Ecto-sp13_S_contig5747:8397..8561 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5747 8398..8561 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5747.16157.1 >prot_Ecto-sp13_S_contig5747.16157.1 ID=prot_Ecto-sp13_S_contig5747.16157.1|Name=mRNA_Ecto-sp13_S_contig5747.16157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
MAEARGVDLPTRWVCVWDQRRAAELGGEQINQRCGLQLWSETFARRQQEV IIIMLSGHGGVGERRAKREEGESSNAQVDRSISSLDADEMDSIARRCKQN SRAASRPQSRPFDAEGLARLRRTIRSVQECTNEEDQRVTSNASKERLESA QRDCMSACLNFISSRGEEPAGDILKAARIFVGKISSTYTDEEIECVKTIR QED* back to topmRNA from alignment at Ecto-sp13_S_contig5747:3197..8561- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig5747.16157.1 ID=mRNA_Ecto-sp13_S_contig5747.16157.1|Name=mRNA_Ecto-sp13_S_contig5747.16157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5365bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5747:3197..8561- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGCAGAAGCTCGCGGCGTAGATCTGCCAACGAGATGGGTGTGCGTGTG
GGATCAGCGCAGGGCGGCTGAGCTGGGCGGAGAACAGATTAACCAAAGAT
GTGGCCTGCAGCTTTGGTCGGAGACGTTCGCTCGTCGTCAGCAGGAGGTC
ATCATCATCATGTTGTTGGATAATCGTTTTTTTAACGGCCGTGTTTGCAA
CCGTTTCACACGCTCGAAGAGTCTGCCAGAGACACGCCATATCTTGGGGG
ATACCCGGTCCCTTCCCCGTTTTTTTCGGGACATTTCTTTCACACCGGCA
AAGGCGCTTGGCACGCCACGCATCTCAAAACGCGGGCGGGTTTTCAACAC
CCCATCCATGCCGATCTGCGACCGCGCGCGGCGGGAAGATCTGGCCACGG
CGGAGTAGGAGAGAGGCGAGCAAAGAGAGAGGAGGGAGAGAGCAGCAACG
CGCAGGTGGGTTTTGCTGTCTTCAAGAGCAGGCTTCAAGCTTGTGGTTGT
GATTTTGGCGCGACGAGATGAAAAGGCCATGGGGACACACACGCGTTGTA
GCTGCATCTTGCGCTTCTTGGGGGGGATCGAGTGCACCGCTCGCTGAAAG
TCCCCCCCCTTCCTCACATGACCAGAGGGGAGTGAGGTCGATCGAGCGAT
GGAGGGACGCTGGTCAGTTCTTGAGAGCTGGTTAGATCTCGGAGACTTGT
GTGCGCTTGGGTTCCTTCCTGTAGGAGCCTTTTTGTCCACAAAGTGCCCT
CGAGAGAGAGAGGGAAACGAGTCCTATCTTTGCGCGAGAGAGTGCGACCA
CCCCCAGGTTGGCACAGGGGCGGGTGCTGGCTGTGAAGATACTCCTACGC
AGTATGGCCTCTGGCAACACAAGGGGTTCGTGTTGAGTTGAAGCCCGCTT
GCGGGGGGCGATGATCTACAGCTATGCATACGATCTTGCGATTTCGGTGA
AGCCGGATATTCCTCCGAGATCTGTCTTTCAGTTGCTTGTCCGTCAATGA
ATGCCGGCACAGGTCTCGATTGCGTTAGAGAGATGGCGAACGTTGCCGCA
ACCAACCCCACCTATTAGACTGAAGGGAAGCAACACGCATCTGGCACTGT
ACTGTAAGATACGAGGAATCCATGGACACCTCGTGTTACCCTGGCCCCCT
TTTTTTCGGGGGACCAAAGAGAGGGAATGCGTCGTACCACAGATTGCATG
TAAAAGCGCTCGCCCGCAACACCTTTGAAAATACTAAGTTGTAGGGGCAT
AAAGGGCTGCGCGGGCCCGGATCGCAAGCCCAAGTGAGGCACAGGAATGA
GTAGAAGGTACCAGGAATGACATGGAACCGGCAGCCGCAGGTTGCTGCGG
GCAACCGCGCTGTTTCTCTCAGAGGTTCTGTATCGGTCGTTTTTTGAATT
GGTGTCTCGTTTCCAACAGGTGCCACTCTCAACGCATGTAAATGAAGCAT
GTACTCTATCATTCTGTACTCGCAGGAAAAACACGCGAGCGAAAGAAGGG
CCACTCAAAGTCACCGACACCGGGCGCTTTATACCTTACTTCTGTAAAGT
TTACTCCCGCAAAACAGAGGCAGGCTCTTTGCACGAAAAATATGAAAGAG
GGTTAGCCCTTTTGGGTCAGGCGAACTCATAGATCATTGGTTGATCGTTT
GTTTGAAAATGCTGGTGTGGTGGCATGCCATGGAGTTGCCGCCCTGTATC
CCTCCACGCCAGGTGTTGGCAAGTCCATCGGTAGGTGTGTCTTTGATAGT
AGCATCGACCGCGCTTACCGGTGATCAATGAAAAGACGTCAGTGCCAGCG
ATTTTTGTAGTCAAACCAAGGTCCCCGGACGGGTACCAATATTCGAAAAA
ATGCTCAATGCGCTAAATGCGAATGCCACCATGGATCTCTCTCCATACAC
CCTGTCACATCATAGCTCCACATAAATATGGTTCTCCCTTCCCGCCCGAA
TCTAGGAAGCCATGATGCAAAGAACGGAGGGCAGCAAAAGGGGCAACTCA
AGCCCAGCCAACCCAGGATATCGTGGTGTGTTGCATCTCCAAATTCGTAG
TCGTACACTCAACAGATCCCAGCAGTCATCGTGTCAGCAGCTACTCTCTC
TCCCGCACCCCGCACGCTCCCCCTTCTTCTTTTATGGCCAAAAAAACAGC
TAGACCCAAAACAGAAAAGGGGTTCAGAAACATGGCTCAATCTGGGTCAC
ACTAAAAGAAACGCCTCAATAAGAAAACAGGAACGACCGCTACTCTATAA
TACTACACAACGAGGGGTTGCCGGGGAGTGTCGAATAAGAAACACCGTAC
AACTCCCCCTGTCCCATGTGCTACCCACCGCCTCCCAGTAAAAGCACTGT
GTGTGGTGCACTAGTTTCAGCATTCACTCATGGAGGCGGGGGTACAGGAC
TTTGTAGCGACAGCAGGACGTTACAGGTGAATAATTTTCGCTTCTACGGT
GTGGCCTTCGTGTGTATGTACAGCCATCAGTGGTGAGAATGCGGTTGCGT
ACGGGAGGCCAGGAAAGCAGCGCAAATCATTCGTTTAACCCGTTGTTGTG
TAGGCAAGCAGAGAAAACAAGAAATAGCCGCTTTCAGTAATTCTGCAGGA
TTCGGCAGCAAGAAGAAATAAATAAACTGGACATGGTGTGAACTTGAACA
ACTTGCGCTGAGTTTTCAGCCCGCAATACATCGAATTTGAGGCTGGACCG
GAAGTTGGCGTTTTCTTTGAAGCGGGCGCTAACTATAACGCACGGTGAAA
TACGCATGCATCTGGTTTTTTCCTGCCTGCTAGACTTCAGTAGACAATAA
CTCCCTGCCTTCAAAAACATGGCTGGGCACACAGCATACCAGTCACCTGC
GCAGTTCGAACCACCGATAGCGTTCTGCGGTATTATAGTTGCATGTACAG
CAGTACCCCAATTAGTCTACTGTGTGACGTTGCGTTTGCGGCGAAACGCC
GCGCCGCCCAGCGATACATGTGATCGATATCCACTCTCAACGTTAGGAAA
ATGACGCCGATTGCTTGAAACTCGGCCCGCCACGTCCAGGGTGCAAATAC
ATAAAGCAATACTCCTTGGCATCTAGACCATACTGGCAGGCCGTATCACG
ACAACCATGGCACTCGCAATCGACGATCTACAACCAGTAAATGGTTCATG
AAAAACAGAAATCTACTTTTCGAGAAAGTGCTTCTTGTACGGCCTTGGAA
GCCCACCGGTGTCTTCTCACAGCCTACTGGCATTTACCCCGGAATCGATG
TTCGTTTTATCCGTTGTACATGCATTGCTCGGCGAGCAGATCGATCGATC
AGCTCCTTGGACGCGGACGAGATGGACAGCATTGCGCGCAGATGCAAGCA
AAATTCCCGCGCCGCCAGTAGACCGCAATCGAGACCCTTTGATGCGGAGG
GGCTGGCTCGGCTACGACGTACGATCAGGTGAGTGGATACGTACCTGATA
AAACATTGCACTGATACAGGAGGGGGGGGAAATACGACGGATGGGGGAAT
TGGCAATCTGAGAGACGCTACATTCAAGCTCGATTAGATATTTTCCCTGT
CCCTCCGTGTTGAATGATGTGGCACCTTGACATGTCACAACGTATTGCAG
CGCTTGTGTAGCGGCCGTCGAGGGATGGGAGGTGAATCGTAGACAATGGC
CAACCCCCCGTGCGATGCGTCACGAAACACCGGATTGCATGTTCTTACTG
TTCCAAATCATCAACCGCAGTACTGCCAGGATCATCGTACGCTGAATAAC
CGCGCCTTGACAATTTCCATAGTTGTTTTTCGGAACCAACCCCCCCCCCA
CGCAAGGGTGCCCAAGGGTGCCGTGAAAAAGTCATCCCGCACACCTAGGT
ACCCCCCCCCGGGCGGGCTGAAAAAATCCTTTTCGGCTTTTTGCTTTATG
GTGCATATTTCTTCAGCCCACTTCTAGGTGCGCTCTTGATGTGTTACGTA
CCCGTTTTGCATGATCATGGTTCCGGGGTTCGCAAGAGAGGATCCTAGCT
CGCGCACAGGGTACCCCAGAGAAAAATGAATTCCCCACCGCGGGCCCCAT
TTGCTGTATATAGAAATTAGAAATTGGAGTACCGTTAACACACAACCCCC
CATTTTTTCTTAATAAAAAAAATAGATTTTTGGTTTGCCTCCCCCCCCCC
CCCCCCCCGAAAACCTCTCTAAATAAGAAAATTGGTATCATAGGTGTCGC
GTAGTTTTGTTTTTCGGGCGCCCTTGCCCCACCTGTTATTATTGCATCTA
TCATGCGTTGGGCTGCGCGTGCATTCAACCCTAACGTCTCCTCTAATTGC
CAGGTCAGTGCAAGAGTGTACAAATGAGGAAGACCAACGAGTGACGTCAA
ACGCCTCTAAGGAACGACTAGAGTCGGCACAGCGCGACTGCATGTCGGCA
TGCCTGAACTTCATCTCTTCACGGGGAGAAGAACCAGGTGTGCCCCCGAG
ACGTTACTTCAAGCAATATCTGCAAGCAAAGCTGCGTGTGTGCGTTTCAG
CACCACTGAGGTCAAACGGGTATGCGCGCGTTGTATGCATACATTCCTCA
CTCCATACAATGGACCGGCGGCTCAGTCAAGCACATGCGACAACGGCGTG
ACTGATAACTTCGTCTATCACCATGTCCGCGGTTGAGATATTGCTGTAGA
TAGACTGGTTGATGGTATGATTCGGCGGTCCATGACGCTTGTTCAACAGC
CGGCTACGAAGCGACTTGTGGCTGTATGGAAGCAAGAAGCACTGTGGGAC
AACGCCTTTTCTCCTCTCCTGCTCTTGCTTCCCGGGGTTCCCTTCCCAAG
CAGGTGATATCCTCAAGGCCGCCAGGATCTTCGTGGGCAAGATCTCTTCG
ACCTACACGGACGAGGAAATCGAGTGCGTCAAGACGATAAGGCAAGAAGA
TTGTATTTGTTTCCACGATTTCCCGAGCAGCACACAGAGACATCTCCCCC
GTGGTTGACAGGGTTAACAAGATCTTAGACAGTTCGGTAACCATCTTGTG
CATCTATGTATCTGTTGGATATTTTGCTGGGAAGGTGTAGAAGGAAGATG
CTGGGTAGTTGGTTCGTCGGGTGTGTTGTTGGTGTAGAACCCTTACATGG
AAGTTTTACATGGAATTTTATGCAAATAAATTTCGGGTTGTTGTGCGCGC
TGCAAAGTACCACTTTTTCTACTATGTGTGCAAGTGGGCAAGGGATAACA
TTTGTTATTTTCATCCCTCCTTATGATTGGAATCTCCGAGAAAAACTGGT
TTGAATGACTTTGGTTCAGAACTCTGGTTCGCGTGGCTCCAAACCGAAAA
AAATCAATTTTGATTTTTTTCTAAATTTCCCTGTGGGCAAAGTACTATTG
TCGAAAGGAAATTCG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig5747:3197..8561- >mRNA_Ecto-sp13_S_contig5747.16157.1 ID=mRNA_Ecto-sp13_S_contig5747.16157.1|Name=mRNA_Ecto-sp13_S_contig5747.16157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5747:3197..8561- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGCAGAAGCTCGCGGCGTAGATCTGCCAACGAGATGGGTGTGCGTGTG GGATCAGCGCAGGGCGGCTGAGCTGGGCGGAGAACAGATTAACCAAAGAT GTGGCCTGCAGCTTTGGTCGGAGACGTTCGCTCGTCGTCAGCAGGAGGTC ATCATCATCATGTTATCTGGCCACGGCGGAGTAGGAGAGAGGCGAGCAAA GAGAGAGGAGGGAGAGAGCAGCAACGCGCAGGTGGATCGATCGATCAGCT CCTTGGACGCGGACGAGATGGACAGCATTGCGCGCAGATGCAAGCAAAAT TCCCGCGCCGCCAGTAGACCGCAATCGAGACCCTTTGATGCGGAGGGGCT GGCTCGGCTACGACGTACGATCAGGTCAGTGCAAGAGTGTACAAATGAGG AAGACCAACGAGTGACGTCAAACGCCTCTAAGGAACGACTAGAGTCGGCA CAGCGCGACTGCATGTCGGCATGCCTGAACTTCATCTCTTCACGGGGAGA AGAACCAGCAGGTGATATCCTCAAGGCCGCCAGGATCTTCGTGGGCAAGA TCTCTTCGACCTACACGGACGAGGAAATCGAGTGCGTCAAGACGATAAGG CAAGAAGATTAA back to top
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